RNA–Protein interactions for RNA: ENST00000551989.1

CCNT1-204, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 726 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-204ENST00000551989 ATP1B4Q9UN42 357 aaPredicted RBP7.52□□□□□ -1.21
CCNT1-204ENST00000551989 KIF14Q15058 1648 aa7.52□□□□□ -1.21
CCNT1-204ENST00000551989 DAPK1P53355 1430 aa7.52□□□□□ -1.21
CCNT1-204ENST00000551989 RPRD2Q5VT52 1461 aaKnown RBP7.51□□□□□ -1.21
CCNT1-204ENST00000551989 ERICH6BQ5W0A0 696 aa7.51□□□□□ -1.21
CCNT1-204ENST00000551989 GRIN2AQ12879 1464 aa7.5□□□□□ -1.21
CCNT1-204ENST00000551989 SHANK2Q9UPX8 1470 aa7.5□□□□□ -1.21
CCNT1-204ENST00000551989 TTLL13PA6NNM8 815 aa7.5□□□□□ -1.21
CCNT1-204ENST00000551989 DDX10Q13206 875 aaKnown RBP7.5□□□□□ -1.21
CCNT1-204ENST00000551989 LCE2DQ5TA82 110 aaPredicted RBP7.5□□□□□ -1.21
CCNT1-204ENST00000551989 POTEGQ6S5H5 508 aa7.5□□□□□ -1.21
CCNT1-204ENST00000551989 CDK11AQ9UQ88 783 aaPredicted RBP7.5□□□□□ -1.21
CCNT1-204ENST00000551989 CDK13Q14004 1512 aaKnown RBP7.5□□□□□ -1.21
CCNT1-204ENST00000551989 DISP1Q96F81 1524 aa7.5□□□□□ -1.21
CCNT1-204ENST00000551989 CNTLNQ9NXG0 1405 aa7.5□□□□□ -1.21
CCNT1-204ENST00000551989 TROQ12816 1431 aaPredicted RBP7.49□□□□□ -1.21
CCNT1-204ENST00000551989 DENND4BO75064 1496 aaPredicted RBP7.49□□□□□ -1.21
CCNT1-204ENST00000551989 NUP153P49790 1475 aaKnown RBP7.49□□□□□ -1.21
CCNT1-204ENST00000551989 TEX14Q8IWB6 1497 aa7.49□□□□□ -1.21
CCNT1-204ENST00000551989 KDM6BO15054 1643 aa7.49□□□□□ -1.21
CCNT1-204ENST00000551989 KDM5DQ9BY66 1539 aa7.48□□□□□ -1.21
CCNT1-204ENST00000551989 NCOA1Q15788 1441 aa7.48□□□□□ -1.21
CCNT1-204ENST00000551989 CDC42BPAQ5VT25 1732 aa7.48□□□□□ -1.21
CCNT1-204ENST00000551989 PLCD3Q8N3E9 789 aa7.48□□□□□ -1.21
CCNT1-204ENST00000551989 ARHGEF12Q9NZN5 1544 aa7.47□□□□□ -1.21
CCNT1-204ENST00000551989 ZBTB47Q9UFB7 747 aaPredicted RBP7.47□□□□□ -1.21
CCNT1-204ENST00000551989 COLQQ9Y215 455 aaPredicted RBP7.47□□□□□ -1.21
CCNT1-204ENST00000551989 ARHGEF5Q12774 1597 aa7.46□□□□□ -1.21
CCNT1-204ENST00000551989 EIF4G2P78344 907 aaKnown RBP eCLIP7.46□□□□□ -1.22
CCNT1-204ENST00000551989 SYNJ2O15056 1496 aa7.46□□□□□ -1.22
CCNT1-204ENST00000551989 CAMSAP2Q08AD1 1489 aa7.46□□□□□ -1.22
CCNT1-204ENST00000551989 ARID4BQ4LE39 1312 aaPredicted RBP7.46□□□□□ -1.22
CCNT1-204ENST00000551989 ANKRD30BQ9BXX2 1392 aa7.46□□□□□ -1.22
CCNT1-204ENST00000551989 ABCC5O15440 1437 aa7.45□□□□□ -1.22
CCNT1-204ENST00000551989 CARMIL2Q6F5E8 1435 aa7.45□□□□□ -1.22
CCNT1-204ENST00000551989 MBD5Q9P267 1494 aa7.45□□□□□ -1.22
CCNT1-204ENST00000551989 IER5LQ5T953 404 aa7.45□□□□□ -1.22
CCNT1-204ENST00000551989 SCUBE2Q9NQ36 999 aa7.45□□□□□ -1.22
CCNT1-204ENST00000551989 PCDH10Q9P2E7 1040 aa7.45□□□□□ -1.22
CCNT1-204ENST00000551989 ARXQ96QS3 562 aa7.44□□□□□ -1.22
CCNT1-204ENST00000551989 TSHZ2Q9NRE2 1034 aa7.44□□□□□ -1.22
CCNT1-204ENST00000551989 PCDHB13Q9Y5F0 798 aa7.44□□□□□ -1.22
CCNT1-204ENST00000551989 ABCA8O94911 1581 aa7.44□□□□□ -1.22
CCNT1-204ENST00000551989 CEP170Q5SW79 1584 aa7.44□□□□□ -1.22
CCNT1-204ENST00000551989 NUP160Q12769 1436 aa7.44□□□□□ -1.22
CCNT1-204ENST00000551989 KDM5CP41229 1560 aa7.43□□□□□ -1.22
CCNT1-204ENST00000551989 LAMC1P11047 1609 aa7.43□□□□□ -1.22
CCNT1-204ENST00000551989 MPHOSPH9Q99550 1183 aa7.43□□□□□ -1.22
CCNT1-204ENST00000551989 TRIM35Q9UPQ4 493 aa7.43□□□□□ -1.22
CCNT1-204ENST00000551989 ROCK2O75116 1388 aaKnown RBP7.43□□□□□ -1.22
CCNT1-204ENST00000551989 CCDC7Q96M83 1385 aa7.43□□□□□ -1.22
CCNT1-204ENST00000551989 PZPP20742 1482 aa7.43□□□□□ -1.22
CCNT1-204ENST00000551989 MAST1Q9Y2H9 1570 aa7.42□□□□□ -1.22
CCNT1-204ENST00000551989 PREX2Q70Z35 1606 aa7.42□□□□□ -1.22
CCNT1-204ENST00000551989 E9PCH4 1651 aa7.42□□□□□ -1.22
CCNT1-204ENST00000551989 FKBP8Q14318 412 aa7.42□□□□□ -1.22
CCNT1-204ENST00000551989 IFNL1Q8IU54 200 aa7.42□□□□□ -1.22
CCNT1-204ENST00000551989 ANKRD30AQ9BXX3 1397 aa7.42□□□□□ -1.22
CCNT1-204ENST00000551989 UHRF1BP1Q6BDS2 1440 aa7.42□□□□□ -1.22
CCNT1-204ENST00000551989 SPATA31E1Q6ZUB1 1445 aa7.42□□□□□ -1.22
CCNT1-204ENST00000551989 KIAA1107Q9UPP5 1409 aa7.42□□□□□ -1.22
CCNT1-204ENST00000551989 GPATCH8Q9UKJ3 1502 aaKnown RBP7.42□□□□□ -1.22
CCNT1-204ENST00000551989 TRIM52Q96A61 297 aa7.41□□□□□ -1.22
CCNT1-204ENST00000551989 KTN1Q86UP2 1357 aaKnown RBP7.41□□□□□ -1.22
CCNT1-204ENST00000551989 RALGAPBQ86X10 1494 aa7.41□□□□□ -1.22
CCNT1-204ENST00000551989 ZNF608Q9ULD9 1512 aaPredicted RBP7.41□□□□□ -1.22
CCNT1-204ENST00000551989 HSPA5P11021 654 aaKnown RBP7.4□□□□□ -1.22
CCNT1-204ENST00000551989 RRP7BPQ9NSQ0 103 aa7.4□□□□□ -1.22
CCNT1-204ENST00000551989 WASHC2AQ641Q2 1341 aa7.4□□□□□ -1.22
CCNT1-204ENST00000551989 EIF2AK4Q9P2K8 1649 aaKnown RBP7.4□□□□□ -1.22
CCNT1-204ENST00000551989 UNC13BO14795 1591 aa7.39□□□□□ -1.23
CCNT1-204ENST00000551989 ABCC10Q5T3U5 1492 aa7.39□□□□□ -1.23
CCNT1-204ENST00000551989 ZBED9Q6R2W3 1325 aa7.39□□□□□ -1.23
CCNT1-204ENST00000551989 FAM212AQ96EL1 285 aa7.39□□□□□ -1.23
CCNT1-204ENST00000551989 KCNH8Q96L42 1107 aa7.39□□□□□ -1.23
CCNT1-204ENST00000551989 PLXNC1O60486 1568 aa7.38□□□□□ -1.23
CCNT1-204ENST00000551989 PTPRGP23470 1445 aa7.38□□□□□ -1.23
CCNT1-204ENST00000551989 SEC24BO95487 1268 aa7.38□□□□□ -1.23
CCNT1-204ENST00000551989 FAM163AQ96GL9 167 aaPredicted RBP7.38□□□□□ -1.23
CCNT1-204ENST00000551989 ANP32EQ9BTT0 268 aa7.38□□□□□ -1.23
CCNT1-204ENST00000551989 MYO5CQ9NQX4 1742 aa7.38□□□□□ -1.23
CCNT1-204ENST00000551989 CDC42BPBQ9Y5S2 1711 aa7.38□□□□□ -1.23
CCNT1-204ENST00000551989 ZMYM4Q5VZL5 1548 aa7.37□□□□□ -1.23
CCNT1-204ENST00000551989 L3MBTL2Q969R5 705 aa7.37□□□□□ -1.23
CCNT1-204ENST00000551989 BCORL1Q5H9F3 1711 aa7.37□□□□□ -1.23
CCNT1-204ENST00000551989 ANKRD50Q9ULJ7 1429 aa7.36□□□□□ -1.23
CCNT1-204ENST00000551989 IRX5P78411 483 aaPredicted RBP7.36□□□□□ -1.23
CCNT1-204ENST00000551989 HNRNPUQ00839 825 aaKnown RBP eCLIP7.36□□□□□ -1.23
CCNT1-204ENST00000551989 RSPH4AQ5TD94 716 aa7.36□□□□□ -1.23
CCNT1-204ENST00000551989 TMEM106CQ9BVX2 250 aa7.36□□□□□ -1.23
CCNT1-204ENST00000551989 PRKRIP1Q9H875 184 aaPredicted RBP7.36□□□□□ -1.23
CCNT1-204ENST00000551989 SHROOM2Q13796 1616 aa7.36□□□□□ -1.23
CCNT1-204ENST00000551989 TRPM1Q7Z4N2 1603 aa7.36□□□□□ -1.23
CCNT1-204ENST00000551989 IQGAP3Q86VI3 1631 aa7.36□□□□□ -1.23
CCNT1-204ENST00000551989 ERCC6Q03468 1493 aa7.36□□□□□ -1.23
CCNT1-204ENST00000551989 PLEKHH2Q8IVE3 1493 aa7.36□□□□□ -1.23
CCNT1-204ENST00000551989 C9orf84Q5VXU9 1444 aa7.35□□□□□ -1.23
CCNT1-204ENST00000551989 CFDP1Q9UEE9 299 aaPredicted RBP7.35□□□□□ -1.23
CCNT1-204ENST00000551989 CHIC2Q9UKJ5 165 aa7.35□□□□□ -1.23
CCNT1-204ENST00000551989 PLB1Q6P1J6 1458 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms