RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 SPRYD3Q8NCJ5 442 aa6.46□□□□□ -1.38
CCDC59-204ENST00000550589 NCKAP5LQ9HCH0 1330 aa6.45□□□□□ -1.38
CCDC59-204ENST00000550589 CC2D2AQ9P2K1 1620 aa6.45□□□□□ -1.38
CCDC59-204ENST00000550589 CUX2O14529 1486 aa6.45□□□□□ -1.38
CCDC59-204ENST00000550589 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.44□□□□□ -1.38
CCDC59-204ENST00000550589 CLSPNQ9HAW4 1339 aa6.44□□□□□ -1.38
CCDC59-204ENST00000550589 IGF1RP08069 1367 aa6.44□□□□□ -1.38
CCDC59-204ENST00000550589 CARMIL1Q5VZK9 1371 aa6.44□□□□□ -1.38
CCDC59-204ENST00000550589 PRDM2Q13029 1718 aa6.44□□□□□ -1.38
CCDC59-204ENST00000550589 CFAP44Q96MT7 982 aa6.44□□□□□ -1.38
CCDC59-204ENST00000550589 CRISPLD2Q9H0B8 497 aa6.44□□□□□ -1.38
CCDC59-204ENST00000550589 FANCD2Q9BXW9 1451 aa6.44□□□□□ -1.38
CCDC59-204ENST00000550589 GPHNQ9NQX3 736 aaPredicted RBP6.43□□□□□ -1.38
CCDC59-204ENST00000550589 FGD5Q6ZNL6 1462 aa6.42□□□□□ -1.38
CCDC59-204ENST00000550589 FHAD1B1AJZ9 1412 aa6.42□□□□□ -1.38
CCDC59-204ENST00000550589 DSG2Q14126 1118 aa6.41□□□□□ -1.38
CCDC59-204ENST00000550589 TRAF7Q6Q0C0 670 aa6.41□□□□□ -1.38
CCDC59-204ENST00000550589 PDS5BQ9NTI5 1447 aa6.41□□□□□ -1.38
CCDC59-204ENST00000550589 FOXK1P85037 733 aa6.4□□□□□ -1.38
CCDC59-204ENST00000550589 TMC2Q8TDI7 906 aa6.4□□□□□ -1.39
CCDC59-204ENST00000550589 DNMBPQ6XZF7 1577 aa6.39□□□□□ -1.39
CCDC59-204ENST00000550589 LAMC3Q9Y6N6 1575 aa6.39□□□□□ -1.39
CCDC59-204ENST00000550589 A0A0G2JS52 829 aa6.39□□□□□ -1.39
CCDC59-204ENST00000550589 LSM11P83369 360 aaKnown RBP eCLIP6.39□□□□□ -1.39
CCDC59-204ENST00000550589 ARAP1Q96P48 1450 aa6.38□□□□□ -1.39
CCDC59-204ENST00000550589 DIEXFQ68CQ4 756 aaKnown RBP6.38□□□□□ -1.39
CCDC59-204ENST00000550589 TSHZ2Q9NRE2 1034 aa6.38□□□□□ -1.39
CCDC59-204ENST00000550589 MAP3K1Q13233 1512 aa6.38□□□□□ -1.39
CCDC59-204ENST00000550589 ABCA10Q8WWZ4 1543 aa6.38□□□□□ -1.39
CCDC59-204ENST00000550589 ZNF316A6NFI3 1004 aaPredicted RBP6.38□□□□□ -1.39
CCDC59-204ENST00000550589 PLPP6Q8IY26 295 aa6.38□□□□□ -1.39
CCDC59-204ENST00000550589 ARHGAP35Q9NRY4 1499 aa6.37□□□□□ -1.39
CCDC59-204ENST00000550589 MFSD10Q14728 455 aa6.37□□□□□ -1.39
CCDC59-204ENST00000550589 GPR153Q6NV75 609 aa6.37□□□□□ -1.39
CCDC59-204ENST00000550589 LARP6Q9BRS8 491 aaKnown RBP6.37□□□□□ -1.39
CCDC59-204ENST00000550589 CENPBP07199 599 aaPredicted RBP6.37□□□□□ -1.39
CCDC59-204ENST00000550589 TOPBP1Q92547 1522 aa6.37□□□□□ -1.39
CCDC59-204ENST00000550589 RRBP1Q9P2E9 1410 aaKnown RBP6.36□□□□□ -1.39
CCDC59-204ENST00000550589 SLC34A2O95436 690 aa6.36□□□□□ -1.39
CCDC59-204ENST00000550589 PDE4AP27815 886 aa6.36□□□□□ -1.39
CCDC59-204ENST00000550589 PLCB2Q00722 1185 aa6.36□□□□□ -1.39
CCDC59-204ENST00000550589 KHSRPQ92945 711 aaKnown RBP eCLIP6.36□□□□□ -1.39
CCDC59-204ENST00000550589 CCNB3Q8WWL7 1395 aa6.36□□□□□ -1.39
CCDC59-204ENST00000550589 ZNF787Q6DD87 383 aa6.35□□□□□ -1.39
CCDC59-204ENST00000550589 POLA1P09884 1462 aaPredicted RBP6.35□□□□□ -1.39
CCDC59-204ENST00000550589 PPP1R15BQ5SWA1 713 aa6.35□□□□□ -1.39
CCDC59-204ENST00000550589 KANK4Q5T7N3 995 aaPredicted RBP6.35□□□□□ -1.39
CCDC59-204ENST00000550589 ARSIQ5FYB1 569 aa6.34□□□□□ -1.39
CCDC59-204ENST00000550589 ZSWIM6Q9HCJ5 1215 aa6.34□□□□□ -1.39
CCDC59-204ENST00000550589 EFCAB5A4FU69 1503 aa6.34□□□□□ -1.39
CCDC59-204ENST00000550589 FMN1Q68DA7 1419 aa6.34□□□□□ -1.39
CCDC59-204ENST00000550589 CUL7Q14999 1698 aa6.34□□□□□ -1.39
CCDC59-204ENST00000550589 KDM4FA0A1W2PPD8 638 aa6.34□□□□□ -1.4
CCDC59-204ENST00000550589 DDX27Q96GQ7 796 aaKnown RBP6.33□□□□□ -1.4
CCDC59-204ENST00000550589 ATP1B4Q9UN42 357 aaPredicted RBP6.33□□□□□ -1.4
CCDC59-204ENST00000550589 PTCD2Q8WV60 388 aaKnown RBP6.32□□□□□ -1.4
CCDC59-204ENST00000550589 ZNF775Q96BV0 537 aaPredicted RBP6.32□□□□□ -1.4
CCDC59-204ENST00000550589 EMILIN3Q9NT22 766 aa6.32□□□□□ -1.4
CCDC59-204ENST00000550589 PCDHGA4Q9Y5G9 962 aa6.32□□□□□ -1.4
CCDC59-204ENST00000550589 RAD54L2Q9Y4B4 1467 aa6.32□□□□□ -1.4
CCDC59-204ENST00000550589 STK17AQ9UEE5 414 aa6.31□□□□□ -1.4
CCDC59-204ENST00000550589 AQRO60306 1485 aaKnown RBP eCLIP6.31□□□□□ -1.41e-6■□□□□ 8.9
CCDC59-204ENST00000550589 GAPVD1Q14C86 1478 aa6.31□□□□□ -1.4
CCDC59-204ENST00000550589 LRRC9Q6ZRR7 1453 aa6.31□□□□□ -1.4
CCDC59-204ENST00000550589 PBX2P40425 430 aa6.31□□□□□ -1.4
CCDC59-204ENST00000550589 OXER1Q8TDS5 423 aa6.31□□□□□ -1.4
CCDC59-204ENST00000550589 NESP48681 1621 aa6.3□□□□□ -1.4
CCDC59-204ENST00000550589 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.3□□□□□ -1.4
CCDC59-204ENST00000550589 FYCO1Q9BQS8 1478 aa6.3□□□□□ -1.4
CCDC59-204ENST00000550589 TIMELESSQ9UNS1 1208 aa6.3□□□□□ -1.4
CCDC59-204ENST00000550589 TIAM1Q13009 1591 aa6.3□□□□□ -1.4
CCDC59-204ENST00000550589 CASKIN1Q8WXD9 1431 aa6.3□□□□□ -1.4
CCDC59-204ENST00000550589 CAMK2BQ13554 666 aa6.29□□□□□ -1.4
CCDC59-204ENST00000550589 ACIN1Q9UKV3 1341 aaKnown RBP6.29□□□□□ -1.4
CCDC59-204ENST00000550589 DHX57Q6P158 1386 aaKnown RBP6.29□□□□□ -1.4
CCDC59-204ENST00000550589 URB2Q14146 1524 aaKnown RBP6.29□□□□□ -1.4
CCDC59-204ENST00000550589 NUDT7P0C024 238 aa6.29□□□□□ -1.4
CCDC59-204ENST00000550589 P3H3Q8IVL6 736 aa6.29□□□□□ -1.4
CCDC59-204ENST00000550589 ITGAEP38570 1179 aa6.28□□□□□ -1.4
CCDC59-204ENST00000550589 FAM50AQ14320 339 aaKnown RBP6.28□□□□□ -1.4
CCDC59-204ENST00000550589 TDRD9Q8NDG6 1382 aaKnown RBP6.28□□□□□ -1.4
CCDC59-204ENST00000550589 UPF1Q92900 1129 aaKnown RBP eCLIP6.28□□□□□ -1.4
CCDC59-204ENST00000550589 MTUS2Q5JR59 1369 aa6.28□□□□□ -1.4
CCDC59-204ENST00000550589 SETD5Q9C0A6 1442 aa6.27□□□□□ -1.41
CCDC59-204ENST00000550589 FHOD3Q2V2M9 1422 aa6.26□□□□□ -1.41
CCDC59-204ENST00000550589 KDM2AQ9Y2K7 1162 aa6.26□□□□□ -1.41
CCDC59-204ENST00000550589 LHX6Q9UPM6 363 aa6.25□□□□□ -1.41
CCDC59-204ENST00000550589 MRC2Q9UBG0 1479 aa6.25□□□□□ -1.41
CCDC59-204ENST00000550589 RAB3GAP2Q9H2M9 1393 aa6.25□□□□□ -1.41
CCDC59-204ENST00000550589 ABCA5Q8WWZ7 1642 aa6.25□□□□□ -1.41
CCDC59-204ENST00000550589 PHLDB1Q86UU1 1377 aa6.24□□□□□ -1.41
CCDC59-204ENST00000550589 ANO8Q9HCE9 1232 aaPredicted RBP6.24□□□□□ -1.41
CCDC59-204ENST00000550589 CCDC18Q5T9S5 1454 aa6.24□□□□□ -1.41
CCDC59-204ENST00000550589 CTTNBP2Q8WZ74 1663 aa6.24□□□□□ -1.41
CCDC59-204ENST00000550589 THOC2Q8NI27 1593 aaKnown RBP6.24□□□□□ -1.41
CCDC59-204ENST00000550589 GRIN2BQ13224 1484 aa6.23□□□□□ -1.41
CCDC59-204ENST00000550589 IFT140Q96RY7 1462 aa6.23□□□□□ -1.41
CCDC59-204ENST00000550589 CDK11AQ9UQ88 783 aaPredicted RBP6.23□□□□□ -1.41
CCDC59-204ENST00000550589 WDR97A6NE52 1622 aa6.23□□□□□ -1.41
CCDC59-204ENST00000550589 HAP1P54257 671 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 847.9 ms