RNA–Protein interactions for RNA: ENST00000547948.1

AC078880.2-201, humanhuman

TSL 1 (best) BASIC

Gene AC078880.2, Length 843 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.2-201ENST00000547948 RGS20O76081 388 aa8.41□□□□□ -1.06
AC078880.2-201ENST00000547948 FOSBP53539 338 aa8.41□□□□□ -1.06
AC078880.2-201ENST00000547948 PPP1R15BQ5SWA1 713 aa8.41□□□□□ -1.06
AC078880.2-201ENST00000547948 DNAJC5Q9H3Z4 198 aa8.41□□□□□ -1.06
AC078880.2-201ENST00000547948 CC2D2AQ9P2K1 1620 aa8.4□□□□□ -1.06
AC078880.2-201ENST00000547948 CCDC88BA6NC98 1476 aa8.4□□□□□ -1.06
AC078880.2-201ENST00000547948 ZBED2Q9BTP6 218 aa8.4□□□□□ -1.06
AC078880.2-201ENST00000547948 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
AC078880.2-201ENST00000547948 PDE4AP27815 886 aa8.38□□□□□ -1.07
AC078880.2-201ENST00000547948 ZDHHC16Q969W1 377 aa8.38□□□□□ -1.07
AC078880.2-201ENST00000547948 CRISPLD2Q9H0B8 497 aa8.38□□□□□ -1.07
AC078880.2-201ENST00000547948 RYDENQ9NUL5 291 aaKnown RBP8.38□□□□□ -1.07
AC078880.2-201ENST00000547948 EVI5O60447 810 aa8.37□□□□□ -1.07
AC078880.2-201ENST00000547948 NBPF3Q9H094 633 aa8.37□□□□□ -1.07
AC078880.2-201ENST00000547948 ANO8Q9HCE9 1232 aaPredicted RBP8.37□□□□□ -1.07
AC078880.2-201ENST00000547948 A0A0G2JS52 829 aa8.36□□□□□ -1.07
AC078880.2-201ENST00000547948 NKX1-1Q15270 411 aaPredicted RBP8.36□□□□□ -1.07
AC078880.2-201ENST00000547948 ADAM33Q9BZ11 813 aa8.36□□□□□ -1.07
AC078880.2-201ENST00000547948 JPH4Q96JJ6 628 aa8.35□□□□□ -1.07
AC078880.2-201ENST00000547948 MAP3K9P80192 1104 aa8.34□□□□□ -1.07
AC078880.2-201ENST00000547948 LARP6Q9BRS8 491 aaKnown RBP8.33□□□□□ -1.08
AC078880.2-201ENST00000547948 NCKAP5LQ9HCH0 1330 aa8.32□□□□□ -1.08
AC078880.2-201ENST00000547948 ANKK1Q8NFD2 765 aa8.3□□□□□ -1.08
AC078880.2-201ENST00000547948 PROX2Q3B8N5 592 aa8.29□□□□□ -1.08
AC078880.2-201ENST00000547948 DDX27Q96GQ7 796 aaKnown RBP8.28□□□□□ -1.08
AC078880.2-201ENST00000547948 RABGEF1Q9UJ41 708 aa8.28□□□□□ -1.08
AC078880.2-201ENST00000547948 PPP1R3GB7ZBB8 358 aa8.27□□□□□ -1.09
AC078880.2-201ENST00000547948 BCAMP50895 628 aa8.27□□□□□ -1.09
AC078880.2-201ENST00000547948 CFTRP13569 1480 aa8.26□□□□□ -1.09
AC078880.2-201ENST00000547948 COL9A1P20849 921 aa8.26□□□□□ -1.09
AC078880.2-201ENST00000547948 PCDHGA10Q9Y5H3 936 aa8.26□□□□□ -1.09
AC078880.2-201ENST00000547948 Q6ZNB5 142 aa8.25□□□□□ -1.09
AC078880.2-201ENST00000547948 KIAA1468Q9P260 1216 aa8.25□□□□□ -1.09
AC078880.2-201ENST00000547948 CADPSQ9ULU8 1353 aa8.23□□□□□ -1.09
AC078880.2-201ENST00000547948 WRNQ14191 1432 aaPredicted RBP eCLIP8.23□□□□□ -1.09
AC078880.2-201ENST00000547948 SOWAHBA6NEL2 793 aa8.23□□□□□ -1.09
AC078880.2-201ENST00000547948 ITGBL1O95965 494 aaPredicted RBP8.23□□□□□ -1.09
AC078880.2-201ENST00000547948 TYW1BQ6NUM6 668 aa8.23□□□□□ -1.09
AC078880.2-201ENST00000547948 PRDM2Q13029 1718 aa8.23□□□□□ -1.09
AC078880.2-201ENST00000547948 LAMC3Q9Y6N6 1575 aa8.22□□□□□ -1.09
AC078880.2-201ENST00000547948 GTPBP6O43824 516 aaPredicted RBP8.22□□□□□ -1.09
AC078880.2-201ENST00000547948 LAPTM4BQ86VI4 370 aa8.22□□□□□ -1.09
AC078880.2-201ENST00000547948 FBXW7Q969H0 707 aa8.22□□□□□ -1.09
AC078880.2-201ENST00000547948 ZFRQ96KR1 1074 aaKnown RBP8.22□□□□□ -1.09
AC078880.2-201ENST00000547948 EMILIN3Q9NT22 766 aa8.22□□□□□ -1.09
AC078880.2-201ENST00000547948 WBP1LQ9NX94 342 aa8.22□□□□□ -1.09
AC078880.2-201ENST00000547948 KCNC4Q03721 635 aa8.21□□□□□ -1.1
AC078880.2-201ENST00000547948 ABCC8Q09428 1581 aa8.2□□□□□ -1.1
AC078880.2-201ENST00000547948 PHF14O94880 888 aa8.2□□□□□ -1.1
AC078880.2-201ENST00000547948 SEPT9Q9UHD8 586 aaPredicted RBP8.2□□□□□ -1.1
AC078880.2-201ENST00000547948 MFSD10Q14728 455 aa8.19□□□□□ -1.1
AC078880.2-201ENST00000547948 NYAP1Q6ZVC0 841 aa8.19□□□□□ -1.1
AC078880.2-201ENST00000547948 C6orf132Q5T0Z8 1188 aa8.18□□□□□ -1.1
AC078880.2-201ENST00000547948 EEA1Q15075 1411 aa8.18□□□□□ -1.1
AC078880.2-201ENST00000547948 ONECUT3O60422 494 aaPredicted RBP8.16□□□□□ -1.1
AC078880.2-201ENST00000547948 TOP2BQ02880 1626 aa8.16□□□□□ -1.1
AC078880.2-201ENST00000547948 RBM33Q96EV2 1170 aaKnown RBP8.16□□□□□ -1.1
AC078880.2-201ENST00000547948 PDS5BQ9NTI5 1447 aa8.16□□□□□ -1.1
AC078880.2-201ENST00000547948 BIVM-ERCC5R4GMW8 1640 aa8.16□□□□□ -1.1
AC078880.2-201ENST00000547948 SYNJ1O43426 1573 aa8.15□□□□□ -1.1
AC078880.2-201ENST00000547948 FANCD2Q9BXW9 1451 aa8.15□□□□□ -1.1
AC078880.2-201ENST00000547948 CEP164Q9UPV0 1460 aa8.15□□□□□ -1.1
AC078880.2-201ENST00000547948 PLCB2Q00722 1185 aa8.15□□□□□ -1.1
AC078880.2-201ENST00000547948 EPAS1Q99814 870 aa8.15□□□□□ -1.1
AC078880.2-201ENST00000547948 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.15□□□□□ -1.1
AC078880.2-201ENST00000547948 LRCH3Q96II8 777 aa8.14□□□□□ -1.11
AC078880.2-201ENST00000547948 TSR3Q9UJK0 312 aaKnown RBP8.14□□□□□ -1.11
AC078880.2-201ENST00000547948 HPS5Q9UPZ3 1129 aa8.14□□□□□ -1.11
AC078880.2-201ENST00000547948 TRIM6-TRIM34B2RNG4 842 aa8.13□□□□□ -1.11
AC078880.2-201ENST00000547948 FAM98CQ17RN3 349 aaKnown RBP8.13□□□□□ -1.11
AC078880.2-201ENST00000547948 GFRA3O60609 400 aa8.12□□□□□ -1.11
AC078880.2-201ENST00000547948 DPYSL4O14531 572 aa8.11□□□□□ -1.11
AC078880.2-201ENST00000547948 LAPTM4AQ15012 233 aa8.11□□□□□ -1.11
AC078880.2-201ENST00000547948 CADPS2Q86UW7 1296 aa8.11□□□□□ -1.11
AC078880.2-201ENST00000547948 DDX12PQ92771 950 aa8.11□□□□□ -1.11
AC078880.2-201ENST00000547948 DNMBPQ6XZF7 1577 aa8.1□□□□□ -1.11
AC078880.2-201ENST00000547948 CUX1P39880 1505 aa8.1□□□□□ -1.11
AC078880.2-201ENST00000547948 PPP4CP60510 307 aa8.1□□□□□ -1.11
AC078880.2-201ENST00000547948 PACS2Q86VP3 889 aa8.1□□□□□ -1.11
AC078880.2-201ENST00000547948 TRAF7Q6Q0C0 670 aa8.09□□□□□ -1.11
AC078880.2-201ENST00000547948 NESP48681 1621 aa8.09□□□□□ -1.11
AC078880.2-201ENST00000547948 KIF27Q86VH2 1401 aa8.05□□□□□ -1.12
AC078880.2-201ENST00000547948 TOPBP1Q92547 1522 aa8.05□□□□□ -1.12
AC078880.2-201ENST00000547948 MAP3K7O43318 606 aa8.05□□□□□ -1.12
AC078880.2-201ENST00000547948 CAMK2BQ13554 666 aa8.05□□□□□ -1.12
AC078880.2-201ENST00000547948 PRKD2Q9BZL6 878 aa8.05□□□□□ -1.12
AC078880.2-201ENST00000547948 TSKSQ9UJT2 592 aa8.05□□□□□ -1.12
AC078880.2-201ENST00000547948 FGD5Q6ZNL6 1462 aa8.05□□□□□ -1.12
AC078880.2-201ENST00000547948 MRC2Q9UBG0 1479 aa8.05□□□□□ -1.12
AC078880.2-201ENST00000547948 ERCC6Q03468 1493 aa8.04□□□□□ -1.12
AC078880.2-201ENST00000547948 SOGA1O94964 1423 aa8.03□□□□□ -1.12
AC078880.2-201ENST00000547948 GOLGA3Q08378 1498 aa8.03□□□□□ -1.12
AC078880.2-201ENST00000547948 SMAPO00193 183 aa8.03□□□□□ -1.12
AC078880.2-201ENST00000547948 NBR1Q14596 966 aa8.03□□□□□ -1.12
AC078880.2-201ENST00000547948 TSR1Q2NL82 804 aaKnown RBP8.03□□□□□ -1.12
AC078880.2-201ENST00000547948 TJAP1Q5JTD0 557 aa8.03□□□□□ -1.12
AC078880.2-201ENST00000547948 SAMD7Q7Z3H4 446 aa8.03□□□□□ -1.12
AC078880.2-201ENST00000547948 FAM9AQ8IZU1 332 aaPredicted RBP8.03□□□□□ -1.12
AC078880.2-201ENST00000547948 KIF21AQ7Z4S6 1674 aa8.02□□□□□ -1.13
AC078880.2-201ENST00000547948 HAP1P54257 671 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms