RNA–Protein interactions for RNA: ENST00000546407.1

CFTR-207, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

TSL 1 (best)

Gene CFTR, Length 222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-207ENST00000546407 RETREG2Q8NC44 543 aa2.57□□□□□ -2
CFTR-207ENST00000546407 SNRNP27Q8WVK2 155 aaKnown RBP2.57□□□□□ -2
CFTR-207ENST00000546407 TSPAN18Q96SJ8 248 aa2.57□□□□□ -2
CFTR-207ENST00000546407 MTA3Q9BTC8 594 aa2.57□□□□□ -2
CFTR-207ENST00000546407 PRDM4Q9UKN5 801 aa2.57□□□□□ -2
CFTR-207ENST00000546407 SUGT1Q9Y2Z0 365 aa2.57□□□□□ -2
CFTR-207ENST00000546407 GOLIM4O00461 696 aa2.56□□□□□ -2
CFTR-207ENST00000546407 TRAK2O60296 914 aa2.56□□□□□ -2
CFTR-207ENST00000546407 EIF3JO75822 258 aaKnown RBP2.56□□□□□ -2
CFTR-207ENST00000546407 TCF3P15923 654 aa2.56□□□□□ -2
CFTR-207ENST00000546407 ARID4AP29374 1257 aaPredicted RBP2.56□□□□□ -2
CFTR-207ENST00000546407 PSEN1P49768 467 aa2.56□□□□□ -2
CFTR-207ENST00000546407 IRX3P78415 501 aaPredicted RBP2.56□□□□□ -2
CFTR-207ENST00000546407 MKRN3Q13064 507 aaKnown RBP2.56□□□□□ -2
CFTR-207ENST00000546407 HDAC1Q13547 482 aaPredicted RBP2.56□□□□□ -2
CFTR-207ENST00000546407 HSP90AA2PQ14568 343 aaPredicted RBP2.56□□□□□ -2
CFTR-207ENST00000546407 HSP90AB3PQ58FF7 597 aa2.56□□□□□ -2
CFTR-207ENST00000546407 TAF3Q5VWG9 929 aa2.56□□□□□ -2
CFTR-207ENST00000546407 SMC5Q8IY18 1101 aa2.56□□□□□ -2
CFTR-207ENST00000546407 PIAS4Q8N2W9 510 aaPredicted RBP2.56□□□□□ -2
CFTR-207ENST00000546407 HELBQ8NG08 1087 aaPredicted RBP2.56□□□□□ -2
CFTR-207ENST00000546407 MICAL1Q8TDZ2 1067 aa2.56□□□□□ -2
CFTR-207ENST00000546407 ZC3H15Q8WU90 426 aaKnown RBP2.56□□□□□ -2
CFTR-207ENST00000546407 SREK1Q8WXA9 508 aaKnown RBP2.56□□□□□ -2
CFTR-207ENST00000546407 DRC1Q96MC2 740 aa2.56□□□□□ -2
CFTR-207ENST00000546407 SLC24A3Q9HC58 644 aa2.56□□□□□ -2
CFTR-207ENST00000546407 BSDC1Q9NW68 430 aaPredicted RBP2.56□□□□□ -2
CFTR-207ENST00000546407 WDR70Q9NW82 654 aa2.56□□□□□ -2
CFTR-207ENST00000546407 SERPINA10Q9UK55 444 aa2.56□□□□□ -2
CFTR-207ENST00000546407 SH3BP1Q9Y3L3 701 aa2.56□□□□□ -2
CFTR-207ENST00000546407 CCER2I3L3R5 266 aa2.55□□□□□ -2
CFTR-207ENST00000546407 RIOK3O14730 519 aaKnown RBP2.55□□□□□ -2
CFTR-207ENST00000546407 RGL2O15211 777 aa2.55□□□□□ -2
CFTR-207ENST00000546407 PPFIA4O75335 1185 aa2.55□□□□□ -2
CFTR-207ENST00000546407 CHGAP10645 457 aaKnown RBP2.55□□□□□ -2
CFTR-207ENST00000546407 KCNA1Q09470 495 aa2.55□□□□□ -2
CFTR-207ENST00000546407 IRF5Q13568 498 aa2.55□□□□□ -2
CFTR-207ENST00000546407 TSR1Q2NL82 804 aaKnown RBP2.55□□□□□ -2
CFTR-207ENST00000546407 FOXD4L6Q3SYB3 417 aaPredicted RBP2.55□□□□□ -2
CFTR-207ENST00000546407 CC2D1BQ5T0F9 858 aaKnown RBP2.55□□□□□ -2
CFTR-207ENST00000546407 FOXD4L3Q6VB84 417 aaPredicted RBP2.55□□□□□ -2
CFTR-207ENST00000546407 EGFL6Q8IUX8 553 aa2.55□□□□□ -2
CFTR-207ENST00000546407 CXorf38Q8TB03 319 aa2.55□□□□□ -2
CFTR-207ENST00000546407 CCDC97Q96F63 343 aaPredicted RBP2.55□□□□□ -2
CFTR-207ENST00000546407 C8orf37Q96NL8 207 aa2.55□□□□□ -2
CFTR-207ENST00000546407 CARD10Q9BWT7 1032 aa2.55□□□□□ -2
CFTR-207ENST00000546407 ARIH1Q9Y4X5 557 aaPredicted RBP2.55□□□□□ -2
CFTR-207ENST00000546407 CREB3O43889 395 aa2.54□□□□□ -2
CFTR-207ENST00000546407 SSR1P43307 286 aaKnown RBP2.54□□□□□ -2
CFTR-207ENST00000546407 CSPP1Q1MSJ5 1256 aa2.54□□□□□ -2
CFTR-207ENST00000546407 MSL3Q8N5Y2 521 aaKnown RBP2.54□□□□□ -2
CFTR-207ENST00000546407 CCDC85AQ96PX6 553 aaPredicted RBP2.54□□□□□ -2
CFTR-207ENST00000546407 YY1AP1Q9H869 796 aa2.54□□□□□ -2
CFTR-207ENST00000546407 METTL14Q9HCE5 456 aaKnown RBP2.54□□□□□ -2
CFTR-207ENST00000546407 SPINK5Q9NQ38 1064 aaPredicted RBP2.54□□□□□ -2
CFTR-207ENST00000546407 SLC52A1Q9NWF4 448 aa2.54□□□□□ -2
CFTR-207ENST00000546407 CEP126Q9P2H0 1117 aa2.54□□□□□ -2
CFTR-207ENST00000546407 FANCIQ9NVI1 1328 aa2.53□□□□□ -2
CFTR-207ENST00000546407 SH3BP5O60239 455 aa2.53□□□□□ -2
CFTR-207ENST00000546407 SSFA2P28290 1259 aa2.53□□□□□ -2
CFTR-207ENST00000546407 COPB2P35606 906 aa2.53□□□□□ -2
CFTR-207ENST00000546407 APLP1P51693 650 aa2.53□□□□□ -2
CFTR-207ENST00000546407 FOXD4Q12950 439 aaPredicted RBP2.53□□□□□ -2
CFTR-207ENST00000546407 MTA1Q13330 715 aa2.53□□□□□ -2
CFTR-207ENST00000546407 ZKSCAN8Q15776 578 aaPredicted RBP2.53□□□□□ -2
CFTR-207ENST00000546407 NBPF10Q6P3W6 841 aaKnown RBP2.53□□□□□ -2
CFTR-207ENST00000546407 CLEC4GQ6UXB4 293 aa2.53□□□□□ -2
CFTR-207ENST00000546407 ANKRD23Q86SG2 305 aa2.53□□□□□ -2
CFTR-207ENST00000546407 PPARGC1BQ86YN6 1023 aaKnown RBP2.53□□□□□ -2
CFTR-207ENST00000546407 HS6ST3Q8IZP7 471 aa2.53□□□□□ -2
CFTR-207ENST00000546407 UBXN4Q92575 508 aa2.53□□□□□ -2
CFTR-207ENST00000546407 ZNF830Q96NB3 372 aaPredicted RBP2.53□□□□□ -2
CFTR-207ENST00000546407 SENP7Q9BQF6 1050 aa2.53□□□□□ -2
CFTR-207ENST00000546407 MAF1Q9H063 256 aa2.53□□□□□ -2
CFTR-207ENST00000546407 RBM28Q9NW13 759 aaKnown RBP2.53□□□□□ -2
CFTR-207ENST00000546407 TMEM51Q9NW97 253 aa2.53□□□□□ -2
CFTR-207ENST00000546407 FRMD4BQ9Y2L6 1034 aa2.53□□□□□ -2
CFTR-207ENST00000546407 COMMD10Q9Y6G5 202 aa2.53□□□□□ -2
CFTR-207ENST00000546407 RPS6KL1Q9Y6S9 549 aa2.53□□□□□ -2
CFTR-207ENST00000546407 RBM47A0AV96 593 aaKnown RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 UNCXA6NJT0 531 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 EPB41L2O43491 1005 aaKnown RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 ONECUT3O60422 494 aaPredicted RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 RAB11FIP3O75154 756 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 PPP1R15AO75807 674 aaPredicted RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 HSP90AA1P07900 732 aaKnown RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 PEX19P40855 299 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 SLC20A2Q08357 652 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 SF3A1Q15459 793 aaKnown RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 ZFYVE27Q5T4F4 411 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 NBPF6Q5VWK0 638 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 ZNF280DQ6N043 979 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 MAMSTRQ6ZN01 415 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 NBPF5PQ86XG9 351 aaPredicted RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 PROM2Q8N271 834 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 LSM14AQ8ND56 463 aaKnown RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 PNISRQ8TF01 805 aaKnown RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 SPOCK2Q92563 424 aa2.52□□□□□ -2.01
CFTR-207ENST00000546407 ARHGEF1Q92888 912 aaKnown RBP2.52□□□□□ -2.01
CFTR-207ENST00000546407 SIRT1Q96EB6 747 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms