RNA–Protein interactions for RNA: ENST00000544227.5

MMP16-204, Transcript of matrix metallopeptidase 16, humanhuman

TSL 1 (best)

Gene MMP16, Length 1,512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP16-204ENST00000544227 HCSTQ9UBK5 93 aa9.51□□□□□ -0.89
MMP16-204ENST00000544227 ARHGAP33O14559 1287 aa9.51□□□□□ -0.89
MMP16-204ENST00000544227 ADGRD1Q6QNK2 874 aa9.51□□□□□ -0.89
MMP16-204ENST00000544227 PLA2G2EQ9NZK7 142 aa9.51□□□□□ -0.89
MMP16-204ENST00000544227 PPP1R37O75864 691 aa9.5□□□□□ -0.89
MMP16-204ENST00000544227 PKD2Q13563 968 aa9.5□□□□□ -0.89
MMP16-204ENST00000544227 TOP2AP11388 1531 aaKnown RBP9.49□□□□□ -0.89
MMP16-204ENST00000544227 HRCP23327 699 aa9.49□□□□□ -0.89
MMP16-204ENST00000544227 UBTFP17480 764 aaKnown RBP9.48□□□□□ -0.89
MMP16-204ENST00000544227 STAC3Q96MF2 364 aa9.46□□□□□ -0.9
MMP16-204ENST00000544227 PRDM2Q13029 1718 aa9.45□□□□□ -0.9
MMP16-204ENST00000544227 PPP4R3BQ5MIZ7 849 aa9.45□□□□□ -0.9
MMP16-204ENST00000544227 PSEN2P49810 448 aa9.44□□□□□ -0.9
MMP16-204ENST00000544227 PLPP6Q8IY26 295 aa9.44□□□□□ -0.9
MMP16-204ENST00000544227 PTCD2Q8WV60 388 aaKnown RBP9.44□□□□□ -0.9
MMP16-204ENST00000544227 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
MMP16-204ENST00000544227 TBC1D12O60347 775 aa9.43□□□□□ -0.9
MMP16-204ENST00000544227 ZNF608Q9ULD9 1512 aaPredicted RBP9.43□□□□□ -0.9
MMP16-204ENST00000544227 CCDC88BA6NC98 1476 aa9.42□□□□□ -0.9
MMP16-204ENST00000544227 TK2O00142 265 aa9.42□□□□□ -0.9
MMP16-204ENST00000544227 FOXK1P85037 733 aa9.42□□□□□ -0.9
MMP16-204ENST00000544227 DMRTA1Q5VZB9 504 aa9.42□□□□□ -0.9
MMP16-204ENST00000544227 RIMBP3CA6NJZ7 1639 aa9.42□□□□□ -0.9
MMP16-204ENST00000544227 RIMBP3BA6NNM3 1639 aa9.42□□□□□ -0.9
MMP16-204ENST00000544227 RIMBP3Q9UFD9 1639 aa9.42□□□□□ -0.9
MMP16-204ENST00000544227 KCTD12Q96CX2 325 aaKnown RBP9.41□□□□□ -0.9
MMP16-204ENST00000544227 LOC105371045A0A1W2PR82 267 aa9.4□□□□□ -0.91
MMP16-204ENST00000544227 KCNK17Q96T54 332 aa9.39□□□□□ -0.91
MMP16-204ENST00000544227 GPHNQ9NQX3 736 aaPredicted RBP9.39□□□□□ -0.91
MMP16-204ENST00000544227 IFT140Q96RY7 1462 aa9.39□□□□□ -0.91
MMP16-204ENST00000544227 KDM4FA0A1W2PPD8 638 aa9.38□□□□□ -0.91
MMP16-204ENST00000544227 DSG2Q14126 1118 aa9.38□□□□□ -0.91
MMP16-204ENST00000544227 TOPBP1Q92547 1522 aa9.38□□□□□ -0.91
MMP16-204ENST00000544227 HRO43593 1189 aa9.37□□□□□ -0.91
MMP16-204ENST00000544227 HS6ST3Q8IZP7 471 aa9.36□□□□□ -0.91
MMP16-204ENST00000544227 ARHGEF11O15085 1522 aa9.35□□□□□ -0.91
MMP16-204ENST00000544227 EIF4G3O43432 1585 aaKnown RBP9.34□□□□□ -0.91
MMP16-204ENST00000544227 UPF1Q92900 1129 aaKnown RBP eCLIP9.34□□□□□ -0.91
MMP16-204ENST00000544227 CYB5RLQ6IPT4 315 aa9.33□□□□□ -0.92
MMP16-204ENST00000544227 PAXIP1Q6ZW49 1069 aaPredicted RBP9.33□□□□□ -0.92
MMP16-204ENST00000544227 AQRO60306 1485 aaKnown RBP eCLIP9.33□□□□□ -0.92
MMP16-204ENST00000544227 CHD1O14646 1710 aa9.33□□□□□ -0.92
MMP16-204ENST00000544227 CHGAP10645 457 aaKnown RBP9.32□□□□□ -0.92
MMP16-204ENST00000544227 DNMBPQ6XZF7 1577 aa9.32□□□□□ -0.92
MMP16-204ENST00000544227 TARBP1Q13395 1621 aaKnown RBP9.32□□□□□ -0.92
MMP16-204ENST00000544227 NBR1Q14596 966 aa9.31□□□□□ -0.92
MMP16-204ENST00000544227 ZNF454Q8N9F8 522 aa9.31□□□□□ -0.92
MMP16-204ENST00000544227 ABCC8Q09428 1581 aa9.31□□□□□ -0.92
MMP16-204ENST00000544227 PTPN5P54829 565 aa9.31□□□□□ -0.92
MMP16-204ENST00000544227 CFAP44Q96MT7 982 aa9.3□□□□□ -0.92
MMP16-204ENST00000544227 TSHZ2Q9NRE2 1034 aa9.29□□□□□ -0.92
MMP16-204ENST00000544227 VPS9D1Q9Y2B5 631 aa9.29□□□□□ -0.92
MMP16-204ENST00000544227 OXER1Q8TDS5 423 aa9.28□□□□□ -0.92
MMP16-204ENST00000544227 POLA1P09884 1462 aaPredicted RBP9.28□□□□□ -0.92
MMP16-204ENST00000544227 RAD54L2Q9Y4B4 1467 aa9.28□□□□□ -0.92
MMP16-204ENST00000544227 RYDENQ9NUL5 291 aaKnown RBP9.27□□□□□ -0.93
MMP16-204ENST00000544227 ARAP1Q96P48 1450 aa9.27□□□□□ -0.93
MMP16-204ENST00000544227 GOLGA8CPA6NN73 597 aa9.26□□□□□ -0.93
MMP16-204ENST00000544227 PPP1R15BQ5SWA1 713 aa9.26□□□□□ -0.93
MMP16-204ENST00000544227 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.26□□□□□ -0.93
MMP16-204ENST00000544227 TDRD9Q8NDG6 1382 aaKnown RBP9.25□□□□□ -0.93
MMP16-204ENST00000544227 PTPREP23469 700 aa9.25□□□□□ -0.93
MMP16-204ENST00000544227 BBXQ8WY36 941 aaPredicted RBP9.25□□□□□ -0.93
MMP16-204ENST00000544227 BCL2L12Q9HB09 334 aa9.25□□□□□ -0.93
MMP16-204ENST00000544227 SOGA1O94964 1423 aa9.24□□□□□ -0.93
MMP16-204ENST00000544227 CRISPLD2Q9H0B8 497 aa9.22□□□□□ -0.93
MMP16-204ENST00000544227 MRPL50Q8N5N7 158 aaKnown RBP9.21□□□□□ -0.93
MMP16-204ENST00000544227 SLC4A5Q9BY07 1137 aa9.21□□□□□ -0.93
MMP16-204ENST00000544227 SNAPC4Q5SXM2 1469 aa9.21□□□□□ -0.94
MMP16-204ENST00000544227 FOSBP53539 338 aa9.21□□□□□ -0.94
MMP16-204ENST00000544227 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
MMP16-204ENST00000544227 WNT2BQ93097 391 aa9.21□□□□□ -0.94
MMP16-204ENST00000544227 FGD5Q6ZNL6 1462 aa9.2□□□□□ -0.94
MMP16-204ENST00000544227 NKX1-1Q15270 411 aaPredicted RBP9.2□□□□□ -0.94
MMP16-204ENST00000544227 CUX1P39880 1505 aa9.19□□□□□ -0.94
MMP16-204ENST00000544227 PDE4AP27815 886 aa9.19□□□□□ -0.94
MMP16-204ENST00000544227 JPH4Q96JJ6 628 aa9.19□□□□□ -0.94
MMP16-204ENST00000544227 NBPF3Q9H094 633 aa9.19□□□□□ -0.94
MMP16-204ENST00000544227 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
MMP16-204ENST00000544227 EVI5O60447 810 aa9.18□□□□□ -0.94
MMP16-204ENST00000544227 CHMP7Q8WUX9 453 aaPredicted RBP9.18□□□□□ -0.94
MMP16-204ENST00000544227 ZBED2Q9BTP6 218 aa9.18□□□□□ -0.94
MMP16-204ENST00000544227 ZDHHC16Q969W1 377 aa9.17□□□□□ -0.94
MMP16-204ENST00000544227 BHMG1C9JSJ3 638 aaPredicted RBP9.16□□□□□ -0.94
MMP16-204ENST00000544227 RGS20O76081 388 aa9.15□□□□□ -0.94
MMP16-204ENST00000544227 WDR97A6NE52 1622 aa9.15□□□□□ -0.94
MMP16-204ENST00000544227 SYNJ1O43426 1573 aa9.15□□□□□ -0.94
MMP16-204ENST00000544227 NCKAP5LQ9HCH0 1330 aa9.15□□□□□ -0.95
MMP16-204ENST00000544227 ADAM33Q9BZ11 813 aa9.15□□□□□ -0.95
MMP16-204ENST00000544227 GRIN2BQ13224 1484 aa9.14□□□□□ -0.95
MMP16-204ENST00000544227 MAGI1Q96QZ7 1491 aaPredicted RBP9.14□□□□□ -0.95
MMP16-204ENST00000544227 MAP3K9P80192 1104 aa9.14□□□□□ -0.95
MMP16-204ENST00000544227 IFFO2Q5TF58 517 aa9.14□□□□□ -0.95
MMP16-204ENST00000544227 IRX2Q9BZI1 471 aaPredicted RBP9.14□□□□□ -0.95
MMP16-204ENST00000544227 PBRM1Q86U86 1689 aa9.13□□□□□ -0.95
MMP16-204ENST00000544227 A0A0G2JS52 829 aa9.13□□□□□ -0.95
MMP16-204ENST00000544227 DDX27Q96GQ7 796 aaKnown RBP9.13□□□□□ -0.95
MMP16-204ENST00000544227 LARP6Q9BRS8 491 aaKnown RBP9.13□□□□□ -0.95
MMP16-204ENST00000544227 SYNJ2O15056 1496 aa9.13□□□□□ -0.95
MMP16-204ENST00000544227 ANO8Q9HCE9 1232 aaPredicted RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms