RNA–Protein interactions for RNA: ENST00000544227.5

MMP16-204, Transcript of matrix metallopeptidase 16, humanhuman

TSL 1 (best)

Gene MMP16, Length 1,512 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP16-204ENST00000544227 AEBP2Q6ZN18 517 aaPredicted RBP22.6■■□□□ 1.21
MMP16-204ENST00000544227 CHIC1Q5VXU3 224 aa21.31■■□□□ 1
MMP16-204ENST00000544227 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
MMP16-204ENST00000544227 PHF23Q9BUL5 403 aaPredicted RBP19.07■□□□□ 0.64
MMP16-204ENST00000544227 FOXD1Q16676 465 aa18.04■□□□□ 0.48
MMP16-204ENST00000544227 MSH5O43196 834 aa17.02■□□□□ 0.32
MMP16-204ENST00000544227 PLPPR3Q6T4P5 718 aa16.99■□□□□ 0.31
MMP16-204ENST00000544227 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
MMP16-204ENST00000544227 PIAS4Q8N2W9 510 aaPredicted RBP16.9■□□□□ 0.3
MMP16-204ENST00000544227 PPP6R1Q9UPN7 881 aa16.69■□□□□ 0.26
MMP16-204ENST00000544227 ADRA2BP18089 450 aa16.67■□□□□ 0.26
MMP16-204ENST00000544227 MAPK8IP2Q13387 824 aaPredicted RBP15.36■□□□□ 0.05
MMP16-204ENST00000544227 SCAF1Q9H7N4 1312 aaKnown RBP15.33■□□□□ 0.04
MMP16-204ENST00000544227 DMRT2Q9Y5R5 561 aa15.32■□□□□ 0.04
MMP16-204ENST00000544227 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
MMP16-204ENST00000544227 DCAF8L1A6NGE4 600 aa14.83□□□□□ -0.04
MMP16-204ENST00000544227 CACNB1Q02641 598 aaPredicted RBP14.75□□□□□ -0.05
MMP16-204ENST00000544227 HOXD11P31277 338 aaPredicted RBP14.65□□□□□ -0.06
MMP16-204ENST00000544227 CNKSR2Q8WXI2 1034 aa14.61□□□□□ -0.07
MMP16-204ENST00000544227 RNF216Q9NWF9 866 aaPredicted RBP14.52□□□□□ -0.08
MMP16-204ENST00000544227 RNF39Q9H2S5 420 aa14.46□□□□□ -0.1
MMP16-204ENST00000544227 NCBP3Q53F19 620 aaKnown RBP14.27□□□□□ -0.12
MMP16-204ENST00000544227 C1QBPQ07021 282 aaKnown RBP14.26□□□□□ -0.13
MMP16-204ENST00000544227 DNAJC5BQ9UF47 199 aa14.15□□□□□ -0.14
MMP16-204ENST00000544227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.06□□□□□ -0.16
MMP16-204ENST00000544227 NPM3O75607 178 aaKnown RBP14□□□□□ -0.17
MMP16-204ENST00000544227 U3KPZ7 1027 aaPredicted RBP13.68□□□□□ -0.22
MMP16-204ENST00000544227 CAPN15O75808 1086 aa13.6□□□□□ -0.23
MMP16-204ENST00000544227 KCNA4P22459 653 aa13.57□□□□□ -0.24
MMP16-204ENST00000544227 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
MMP16-204ENST00000544227 DSG3P32926 999 aa13.48□□□□□ -0.25
MMP16-204ENST00000544227 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
MMP16-204ENST00000544227 APLP2Q06481 763 aa13.38□□□□□ -0.27
MMP16-204ENST00000544227 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
MMP16-204ENST00000544227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.29□□□□□ -0.28
MMP16-204ENST00000544227 HNRNPUL2Q1KMD3 747 aaKnown RBP13.29□□□□□ -0.28
MMP16-204ENST00000544227 ZNF219Q9P2Y4 722 aaPredicted RBP13.29□□□□□ -0.28
MMP16-204ENST00000544227 ABCB7O75027 752 aa13.25□□□□□ -0.29
MMP16-204ENST00000544227 POTEHQ6S545 545 aa13.23□□□□□ -0.29
MMP16-204ENST00000544227 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
MMP16-204ENST00000544227 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
MMP16-204ENST00000544227 RBM42Q9BTD8 480 aaKnown RBP12.94□□□□□ -0.34
MMP16-204ENST00000544227 POLA2Q14181 598 aa12.88□□□□□ -0.35
MMP16-204ENST00000544227 SLC4A1APQ9BWU0 796 aaKnown RBP12.82□□□□□ -0.36
MMP16-204ENST00000544227 FOXD4L1Q9NU39 408 aa12.76□□□□□ -0.37
MMP16-204ENST00000544227 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
MMP16-204ENST00000544227 NISCHQ9Y2I1 1504 aa12.67□□□□□ -0.38
MMP16-204ENST00000544227 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
MMP16-204ENST00000544227 ATF5Q9Y2D1 282 aaPredicted RBP12.64□□□□□ -0.39
MMP16-204ENST00000544227 AKT1S1Q96B36 256 aa12.56□□□□□ -0.4
MMP16-204ENST00000544227 OSCARQ8IYS5 282 aa12.51□□□□□ -0.41
MMP16-204ENST00000544227 REM2Q8IYK8 340 aaPredicted RBP12.43□□□□□ -0.42
MMP16-204ENST00000544227 ZBTB22O15209 634 aa12.42□□□□□ -0.42
MMP16-204ENST00000544227 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
MMP16-204ENST00000544227 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
MMP16-204ENST00000544227 PIP4P2Q8N4L2 257 aa12.33□□□□□ -0.44
MMP16-204ENST00000544227 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
MMP16-204ENST00000544227 SP7Q8TDD2 431 aaPredicted RBP12.32□□□□□ -0.44
MMP16-204ENST00000544227 FBLN2P98095 1184 aa12.28□□□□□ -0.44
MMP16-204ENST00000544227 HAX1O00165 279 aa12.22□□□□□ -0.45
MMP16-204ENST00000544227 SPDYE2BA6NHP3 402 aa12.21□□□□□ -0.46
MMP16-204ENST00000544227 SPDYE6P0CI01 402 aa12.21□□□□□ -0.46
MMP16-204ENST00000544227 FXR2P51116 673 aaKnown RBP eCLIP12.21□□□□□ -0.46
MMP16-204ENST00000544227 SPDYE2Q495Y8 402 aa12.21□□□□□ -0.46
MMP16-204ENST00000544227 CLEC11AQ9Y240 323 aa12.1□□□□□ -0.47
MMP16-204ENST00000544227 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
MMP16-204ENST00000544227 ZNF692Q9BU19 519 aaPredicted RBP12.06□□□□□ -0.48
MMP16-204ENST00000544227 MKRN4PQ13434 485 aaPredicted RBP12.05□□□□□ -0.48
MMP16-204ENST00000544227 PRKAR2AP13861 404 aaKnown RBP12.02□□□□□ -0.48
MMP16-204ENST00000544227 SSUH2Q9Y2M2 353 aa11.98□□□□□ -0.49
MMP16-204ENST00000544227 EVX2Q03828 476 aa11.96□□□□□ -0.5
MMP16-204ENST00000544227 PABPN1Q86U42 306 aaKnown RBP eCLIP11.86□□□□□ -0.51
MMP16-204ENST00000544227 PRR29P0C7W0 189 aa11.85□□□□□ -0.51
MMP16-204ENST00000544227 CHADLQ6NUI6 762 aa11.84□□□□□ -0.51
MMP16-204ENST00000544227 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
MMP16-204ENST00000544227 EHMT2Q96KQ7 1210 aa11.76□□□□□ -0.53
MMP16-204ENST00000544227 GABBR2O75899 941 aa11.72□□□□□ -0.53
MMP16-204ENST00000544227 CSRNP3Q8WYN3 585 aa11.7□□□□□ -0.54
MMP16-204ENST00000544227 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.55
MMP16-204ENST00000544227 FARP1Q9Y4F1 1045 aaPredicted RBP11.62□□□□□ -0.55
MMP16-204ENST00000544227 ABCC9O60706 1549 aa11.55□□□□□ -0.56
MMP16-204ENST00000544227 LHX8Q68G74 356 aa11.55□□□□□ -0.56
MMP16-204ENST00000544227 STAG3Q9UJ98 1225 aa11.5□□□□□ -0.57
MMP16-204ENST00000544227 CLCN6P51797 869 aa11.48□□□□□ -0.57
MMP16-204ENST00000544227 SPDYE4A6NLX3 237 aa11.46□□□□□ -0.57
MMP16-204ENST00000544227 ZRANB1Q9UGI0 708 aa11.45□□□□□ -0.58
MMP16-204ENST00000544227 DCBLD2Q96PD2 775 aa11.45□□□□□ -0.58
MMP16-204ENST00000544227 CREBZFQ9NS37 354 aa11.44□□□□□ -0.58
MMP16-204ENST00000544227 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
MMP16-204ENST00000544227 ZNF579Q8NAF0 562 aaKnown RBP11.41□□□□□ -0.58
MMP16-204ENST00000544227 CCDC180Q9P1Z9 1646 aa11.39□□□□□ -0.59
MMP16-204ENST00000544227 PAK3O75914 559 aaPredicted RBP11.38□□□□□ -0.59
MMP16-204ENST00000544227 NPM1P06748 294 aaKnown RBP eCLIP11.3□□□□□ -0.6
MMP16-204ENST00000544227 GALR2O43603 387 aaPredicted RBP11.29□□□□□ -0.6
MMP16-204ENST00000544227 RTN4Q9NQC3 1192 aaKnown RBP11.28□□□□□ -0.6
MMP16-204ENST00000544227 PHF12Q96QT6 1004 aa11.25□□□□□ -0.61
MMP16-204ENST00000544227 MNX1P50219 401 aaPredicted RBP11.16□□□□□ -0.62
MMP16-204ENST00000544227 MS4A3Q96HJ5 214 aa11.09□□□□□ -0.63
MMP16-204ENST00000544227 TSPYL2Q9H2G4 693 aaPredicted RBP11.09□□□□□ -0.63
MMP16-204ENST00000544227 DAXXQ9UER7 740 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms