RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 ABCA10Q8WWZ4 1543 aa9.75□□□□□ -0.85
SOX6-208ENST00000527619 RRAGDQ9NQL2 400 aaPredicted RBP9.75□□□□□ -0.85
SOX6-208ENST00000527619 KIF7Q2M1P5 1343 aa9.75□□□□□ -0.85
SOX6-208ENST00000527619 PTPRKQ15262 1439 aa9.74□□□□□ -0.85
SOX6-208ENST00000527619 HECW1Q76N89 1606 aa9.74□□□□□ -0.85
SOX6-208ENST00000527619 FRAT2O75474 233 aaPredicted RBP9.74□□□□□ -0.85
SOX6-208ENST00000527619 SLC4A3P48751 1232 aa9.74□□□□□ -0.85
SOX6-208ENST00000527619 CCDC9Q9Y3X0 531 aaKnown RBP9.74□□□□□ -0.85
SOX6-208ENST00000527619 EIF4G3O43432 1585 aaKnown RBP9.73□□□□□ -0.85
SOX6-208ENST00000527619 NCLP19338 710 aaKnown RBP9.73□□□□□ -0.85
SOX6-208ENST00000527619 DHX29Q7Z478 1369 aaKnown RBP9.73□□□□□ -0.85
SOX6-208ENST00000527619 GAPVD1Q14C86 1478 aa9.73□□□□□ -0.85
SOX6-208ENST00000527619 FYCO1Q9BQS8 1478 aa9.73□□□□□ -0.85
SOX6-208ENST00000527619 PPP4R3CPQ6ZMV5 832 aa9.72□□□□□ -0.85
SOX6-208ENST00000527619 C1orf115Q9H7X2 142 aa9.72□□□□□ -0.85
SOX6-208ENST00000527619 TMED8Q6PL24 325 aaPredicted RBP9.71□□□□□ -0.85
SOX6-208ENST00000527619 RCAN3Q9UKA8 241 aa9.71□□□□□ -0.85
SOX6-208ENST00000527619 SPATA31E1Q6ZUB1 1445 aa9.71□□□□□ -0.85
SOX6-208ENST00000527619 PNISRQ8TF01 805 aaKnown RBP9.71□□□□□ -0.86
SOX6-208ENST00000527619 L1TD1Q5T7N2 865 aaKnown RBP9.7□□□□□ -0.86
SOX6-208ENST00000527619 RNF216Q9NWF9 866 aaPredicted RBP9.7□□□□□ -0.86
SOX6-208ENST00000527619 GRIN2BQ13224 1484 aa9.7□□□□□ -0.86
SOX6-208ENST00000527619 CENPJQ9HC77 1338 aaPredicted RBP9.7□□□□□ -0.86
SOX6-208ENST00000527619 FOXD4L1Q9NU39 408 aa9.7□□□□□ -0.86
SOX6-208ENST00000527619 DENND4BO75064 1496 aaPredicted RBP9.7□□□□□ -0.86
SOX6-208ENST00000527619 ARID4BQ4LE39 1312 aaPredicted RBP9.7□□□□□ -0.86
SOX6-208ENST00000527619 L3MBTL2Q969R5 705 aa9.69□□□□□ -0.86
SOX6-208ENST00000527619 FOXD1Q16676 465 aa9.69□□□□□ -0.86
SOX6-208ENST00000527619 ATP1B4Q9UN42 357 aaPredicted RBP9.69□□□□□ -0.86
SOX6-208ENST00000527619 CASKIN1Q8WXD9 1431 aa9.68□□□□□ -0.86
SOX6-208ENST00000527619 GCC2Q8IWJ2 1684 aa9.68□□□□□ -0.86
SOX6-208ENST00000527619 CHMP7Q8WUX9 453 aaPredicted RBP9.68□□□□□ -0.86
SOX6-208ENST00000527619 ZNF592Q92610 1267 aa9.68□□□□□ -0.86
SOX6-208ENST00000527619 LRPPRCP42704 1394 aaKnown RBP9.68□□□□□ -0.86
SOX6-208ENST00000527619 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
SOX6-208ENST00000527619 OSCARQ8IYS5 282 aa9.68□□□□□ -0.86
SOX6-208ENST00000527619 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
SOX6-208ENST00000527619 PNNQ9H307 717 aaKnown RBP9.68□□□□□ -0.86
SOX6-208ENST00000527619 SNAPC4Q5SXM2 1469 aa9.67□□□□□ -0.86
SOX6-208ENST00000527619 PKD2Q13563 968 aa9.67□□□□□ -0.86
SOX6-208ENST00000527619 TMC1Q8TDI8 760 aa9.67□□□□□ -0.86
SOX6-208ENST00000527619 KCNG1Q9UIX4 513 aa9.67□□□□□ -0.86
SOX6-208ENST00000527619 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.67□□□□□ -0.86
SOX6-208ENST00000527619 IGF1RP08069 1367 aa9.67□□□□□ -0.86
SOX6-208ENST00000527619 MIA2Q96PC5 1412 aa9.66□□□□□ -0.86
SOX6-208ENST00000527619 CLCN1P35523 988 aa9.66□□□□□ -0.86
SOX6-208ENST00000527619 FAM161AQ3B820 660 aa9.66□□□□□ -0.86
SOX6-208ENST00000527619 NBPF8Q3BBV2 869 aa9.66□□□□□ -0.86
SOX6-208ENST00000527619 WWC1Q8IX03 1113 aa9.66□□□□□ -0.86
SOX6-208ENST00000527619 MAGI1Q96QZ7 1491 aaPredicted RBP9.65□□□□□ -0.86
SOX6-208ENST00000527619 PDE3BQ13370 1112 aa9.65□□□□□ -0.86
SOX6-208ENST00000527619 SKAP1Q86WV1 359 aa9.65□□□□□ -0.86
SOX6-208ENST00000527619 POGKQ9P215 609 aa9.65□□□□□ -0.86
SOX6-208ENST00000527619 KTN1Q86UP2 1357 aaKnown RBP9.65□□□□□ -0.86
SOX6-208ENST00000527619 CARMIL1Q5VZK9 1371 aa9.64□□□□□ -0.87
SOX6-208ENST00000527619 PBRM1Q86U86 1689 aa9.64□□□□□ -0.87
SOX6-208ENST00000527619 TEX14Q8IWB6 1497 aa9.64□□□□□ -0.87
SOX6-208ENST00000527619 EFCAB5A4FU69 1503 aa9.64□□□□□ -0.87
SOX6-208ENST00000527619 FHOD3Q2V2M9 1422 aa9.64□□□□□ -0.87
SOX6-208ENST00000527619 MYOM3Q5VTT5 1437 aa9.64□□□□□ -0.87
SOX6-208ENST00000527619 C8orf34Q49A92 452 aa9.64□□□□□ -0.87
SOX6-208ENST00000527619 ZNF830Q96NB3 372 aaPredicted RBP9.64□□□□□ -0.87
SOX6-208ENST00000527619 ARID3CA6NKF2 412 aa9.63□□□□□ -0.87
SOX6-208ENST00000527619 P3H3Q8IVL6 736 aa9.63□□□□□ -0.87
SOX6-208ENST00000527619 BRD4O60885 1362 aaPredicted RBP9.63□□□□□ -0.87
SOX6-208ENST00000527619 RPRD2Q5VT52 1461 aaKnown RBP9.63□□□□□ -0.87
SOX6-208ENST00000527619 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
SOX6-208ENST00000527619 DNAJC5Q9H3Z4 198 aa9.63□□□□□ -0.87
SOX6-208ENST00000527619 KDM2BQ8NHM5 1336 aa9.63□□□□□ -0.87
SOX6-208ENST00000527619 BCORL1Q5H9F3 1711 aa9.62□□□□□ -0.87
SOX6-208ENST00000527619 PDCL3Q9H2J4 239 aa9.62□□□□□ -0.87
SOX6-208ENST00000527619 MTUS2Q5JR59 1369 aa9.62□□□□□ -0.87
SOX6-208ENST00000527619 SYNJ2O15056 1496 aa9.62□□□□□ -0.87
SOX6-208ENST00000527619 BRPF1P55201 1214 aaPredicted RBP9.62□□□□□ -0.87
SOX6-208ENST00000527619 MPHOSPH9Q99550 1183 aa9.62□□□□□ -0.87
SOX6-208ENST00000527619 CENPQQ7L2Z9 268 aaPredicted RBP9.61□□□□□ -0.87
SOX6-208ENST00000527619 TICAM2Q86XR7 235 aa9.61□□□□□ -0.87
SOX6-208ENST00000527619 KDM6BO15054 1643 aa9.61□□□□□ -0.87
SOX6-208ENST00000527619 ROCK2O75116 1388 aaKnown RBP9.6□□□□□ -0.87
SOX6-208ENST00000527619 KIF15Q9NS87 1388 aa9.6□□□□□ -0.87
SOX6-208ENST00000527619 SUPT6HQ7KZ85 1726 aaKnown RBP9.6□□□□□ -0.87
SOX6-208ENST00000527619 MYBBP1AQ9BQG0 1328 aaKnown RBP9.6□□□□□ -0.87
SOX6-208ENST00000527619 PLIN1O60240 522 aa9.6□□□□□ -0.87
SOX6-208ENST00000527619 RRP7BPQ9NSQ0 103 aa9.6□□□□□ -0.87
SOX6-208ENST00000527619 CHD1O14646 1710 aa9.59□□□□□ -0.87
SOX6-208ENST00000527619 VIRMAQ69YN4 1812 aaKnown RBP9.59□□□□□ -0.87
SOX6-208ENST00000527619 ANKRD30BQ9BXX2 1392 aa9.59□□□□□ -0.87
SOX6-208ENST00000527619 GOLGA6L3A6NEY3 463 aa9.59□□□□□ -0.88
SOX6-208ENST00000527619 TMEM51Q9NW97 253 aa9.59□□□□□ -0.88
SOX6-208ENST00000527619 ADAMTS12P58397 1594 aa9.58□□□□□ -0.88
SOX6-208ENST00000527619 XRCC6P12956 609 aaKnown RBP eCLIP9.58□□□□□ -0.88
SOX6-208ENST00000527619 USP47Q96K76 1375 aa9.58□□□□□ -0.88
SOX6-208ENST00000527619 RALBP1Q15311 655 aa9.58□□□□□ -0.88
SOX6-208ENST00000527619 RGS22Q8NE09 1264 aa9.58□□□□□ -0.88
SOX6-208ENST00000527619 GRIN2AQ12879 1464 aa9.57□□□□□ -0.88
SOX6-208ENST00000527619 FSD2A1L4K1 749 aa9.57□□□□□ -0.88
SOX6-208ENST00000527619 TCOF1Q13428 1488 aaKnown RBP9.57□□□□□ -0.88
SOX6-208ENST00000527619 VGFO15240 615 aaPredicted RBP9.57□□□□□ -0.88
SOX6-208ENST00000527619 KDM5CP41229 1560 aa9.57□□□□□ -0.88
SOX6-208ENST00000527619 EHBP1L1Q8N3D4 1523 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms