RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 WDR62O43379 1518 aa12.85□□□□□ -0.35
CTHRC1-203ENST00000520337 LOC105371045A0A1W2PR82 267 aa12.85□□□□□ -0.35
CTHRC1-203ENST00000520337 PSDA5PKW4 1024 aaPredicted RBP12.85□□□□□ -0.35
CTHRC1-203ENST00000520337 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.84□□□□□ -0.35
CTHRC1-203ENST00000520337 MYT1LQ9UL68 1186 aa12.84□□□□□ -0.35
CTHRC1-203ENST00000520337 LHX6Q9UPM6 363 aa12.84□□□□□ -0.35
CTHRC1-203ENST00000520337 RAD54L2Q9Y4B4 1467 aa12.83□□□□□ -0.36
CTHRC1-203ENST00000520337 WDR97A6NE52 1622 aa12.82□□□□□ -0.36
CTHRC1-203ENST00000520337 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
CTHRC1-203ENST00000520337 DDX27Q96GQ7 796 aaKnown RBP12.82□□□□□ -0.36
CTHRC1-203ENST00000520337 MFSD10Q14728 455 aa12.81□□□□□ -0.36
CTHRC1-203ENST00000520337 OXER1Q8TDS5 423 aa12.81□□□□□ -0.36
CTHRC1-203ENST00000520337 LARP6Q9BRS8 491 aaKnown RBP12.81□□□□□ -0.36
CTHRC1-203ENST00000520337 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
CTHRC1-203ENST00000520337 KIF27Q86VH2 1401 aa12.8□□□□□ -0.36
CTHRC1-203ENST00000520337 ABCA10Q8WWZ4 1543 aa12.8□□□□□ -0.36
CTHRC1-203ENST00000520337 CUX2O14529 1486 aa12.79□□□□□ -0.36
CTHRC1-203ENST00000520337 PBX2P40425 430 aa12.79□□□□□ -0.36
CTHRC1-203ENST00000520337 SPRYD3Q8NCJ5 442 aa12.79□□□□□ -0.36
CTHRC1-203ENST00000520337 KIF21BO75037 1637 aa12.75□□□□□ -0.37
CTHRC1-203ENST00000520337 CADPS2Q86UW7 1296 aa12.75□□□□□ -0.37
CTHRC1-203ENST00000520337 UPF1Q92900 1129 aaKnown RBP eCLIP12.74□□□□□ -0.37
CTHRC1-203ENST00000520337 ABCA5Q8WWZ7 1642 aa12.73□□□□□ -0.37
CTHRC1-203ENST00000520337 IGF1RP08069 1367 aa12.73□□□□□ -0.37
CTHRC1-203ENST00000520337 IFT140Q96RY7 1462 aa12.72□□□□□ -0.37
CTHRC1-203ENST00000520337 PRXQ9BXM0 1461 aa12.72□□□□□ -0.37
CTHRC1-203ENST00000520337 TDRD9Q8NDG6 1382 aaKnown RBP12.7□□□□□ -0.38
CTHRC1-203ENST00000520337 PTGER2P43116 358 aa12.7□□□□□ -0.38
CTHRC1-203ENST00000520337 LSM11P83369 360 aaKnown RBP eCLIP12.7□□□□□ -0.38
CTHRC1-203ENST00000520337 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
CTHRC1-203ENST00000520337 GOLGA3Q08378 1498 aa12.68□□□□□ -0.38
CTHRC1-203ENST00000520337 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
CTHRC1-203ENST00000520337 RAPGEF2Q9Y4G8 1499 aa12.68□□□□□ -0.38
CTHRC1-203ENST00000520337 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
CTHRC1-203ENST00000520337 ANKRD13DQ6ZTN6 518 aa12.67□□□□□ -0.38
CTHRC1-203ENST00000520337 ZNF608Q9ULD9 1512 aaPredicted RBP12.67□□□□□ -0.38
CTHRC1-203ENST00000520337 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
CTHRC1-203ENST00000520337 ARHGAP33O14559 1287 aa12.66□□□□□ -0.38
CTHRC1-203ENST00000520337 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
CTHRC1-203ENST00000520337 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
CTHRC1-203ENST00000520337 AQRO60306 1485 aaKnown RBP eCLIP12.65□□□□□ -0.38
CTHRC1-203ENST00000520337 MAP3K9P80192 1104 aa12.65□□□□□ -0.38
CTHRC1-203ENST00000520337 POTEEQ6S8J3 1075 aa12.65□□□□□ -0.38
CTHRC1-203ENST00000520337 CUL7Q14999 1698 aa12.64□□□□□ -0.39
CTHRC1-203ENST00000520337 CFAP44Q96MT7 982 aa12.64□□□□□ -0.39
CTHRC1-203ENST00000520337 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
CTHRC1-203ENST00000520337 CARMIL1Q5VZK9 1371 aa12.64□□□□□ -0.39
CTHRC1-203ENST00000520337 TNIKQ9UKE5 1360 aa12.64□□□□□ -0.39
CTHRC1-203ENST00000520337 EVI5O60447 810 aa12.63□□□□□ -0.39
CTHRC1-203ENST00000520337 CAMK2BQ13554 666 aa12.63□□□□□ -0.39
CTHRC1-203ENST00000520337 EIF4G3O43432 1585 aaKnown RBP12.62□□□□□ -0.39
CTHRC1-203ENST00000520337 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
CTHRC1-203ENST00000520337 UBTFP17480 764 aaKnown RBP12.61□□□□□ -0.39
CTHRC1-203ENST00000520337 ZNF454Q8N9F8 522 aa12.6□□□□□ -0.39
CTHRC1-203ENST00000520337 KCNH8Q96L42 1107 aa12.6□□□□□ -0.39
CTHRC1-203ENST00000520337 GRIN2BQ13224 1484 aa12.59□□□□□ -0.39
CTHRC1-203ENST00000520337 FOSBP53539 338 aa12.59□□□□□ -0.39
CTHRC1-203ENST00000520337 JPH4Q96JJ6 628 aa12.59□□□□□ -0.39
CTHRC1-203ENST00000520337 TK2O00142 265 aa12.57□□□□□ -0.4
CTHRC1-203ENST00000520337 ADAMTS12P58397 1594 aa12.56□□□□□ -0.4
CTHRC1-203ENST00000520337 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
CTHRC1-203ENST00000520337 CEP162Q5TB80 1403 aa12.54□□□□□ -0.4
CTHRC1-203ENST00000520337 ADGRD1Q6QNK2 874 aa12.54□□□□□ -0.4
CTHRC1-203ENST00000520337 FHAD1B1AJZ9 1412 aa12.54□□□□□ -0.4
CTHRC1-203ENST00000520337 PSEN2P49810 448 aa12.53□□□□□ -0.4
CTHRC1-203ENST00000520337 SNAPC4Q5SXM2 1469 aa12.53□□□□□ -0.4
CTHRC1-203ENST00000520337 ZDHHC16Q969W1 377 aa12.52□□□□□ -0.41
CTHRC1-203ENST00000520337 KCNK17Q96T54 332 aa12.52□□□□□ -0.41
CTHRC1-203ENST00000520337 CTTNBP2Q8WZ74 1663 aa12.51□□□□□ -0.41
CTHRC1-203ENST00000520337 DMRTA1Q5VZB9 504 aa12.51□□□□□ -0.41
CTHRC1-203ENST00000520337 MAGI1Q96QZ7 1491 aaPredicted RBP12.51□□□□□ -0.41
CTHRC1-203ENST00000520337 PTPREP23469 700 aa12.5□□□□□ -0.41
CTHRC1-203ENST00000520337 WDR70Q9NW82 654 aa12.5□□□□□ -0.41
CTHRC1-203ENST00000520337 DPYSL4O14531 572 aa12.49□□□□□ -0.41
CTHRC1-203ENST00000520337 CLIP1P30622 1438 aa12.47□□□□□ -0.41
CTHRC1-203ENST00000520337 PHF14O94880 888 aa12.47□□□□□ -0.41
CTHRC1-203ENST00000520337 E2F4Q16254 413 aa12.47□□□□□ -0.41
CTHRC1-203ENST00000520337 FBXW7Q969H0 707 aa12.47□□□□□ -0.41
CTHRC1-203ENST00000520337 SLC4A5Q9BY07 1137 aa12.47□□□□□ -0.41
CTHRC1-203ENST00000520337 HRO43593 1189 aa12.46□□□□□ -0.41
CTHRC1-203ENST00000520337 PCDHGA10Q9Y5H3 936 aa12.46□□□□□ -0.41
CTHRC1-203ENST00000520337 SYNJ2O15056 1496 aa12.46□□□□□ -0.42
CTHRC1-203ENST00000520337 TYW1BQ6NUM6 668 aa12.45□□□□□ -0.42
CTHRC1-203ENST00000520337 ADAM33Q9BZ11 813 aa12.45□□□□□ -0.42
CTHRC1-203ENST00000520337 ARIH1Q9Y4X5 557 aaPredicted RBP12.45□□□□□ -0.42
CTHRC1-203ENST00000520337 GRIN2AQ12879 1464 aa12.45□□□□□ -0.42
CTHRC1-203ENST00000520337 SPDYE16A6NNV3 312 aaPredicted RBP12.43□□□□□ -0.42
CTHRC1-203ENST00000520337 PDIA6Q15084 440 aa12.43□□□□□ -0.42
CTHRC1-203ENST00000520337 EPAS1Q99814 870 aa12.43□□□□□ -0.42
CTHRC1-203ENST00000520337 RANGAP1P46060 587 aaPredicted RBP12.42□□□□□ -0.42
CTHRC1-203ENST00000520337 PLA2G2EQ9NZK7 142 aa12.42□□□□□ -0.42
CTHRC1-203ENST00000520337 VPS9D1Q9Y2B5 631 aa12.42□□□□□ -0.42
CTHRC1-203ENST00000520337 CHD1O14646 1710 aa12.42□□□□□ -0.42
CTHRC1-203ENST00000520337 ARHGAP35Q9NRY4 1499 aa12.41□□□□□ -0.42
CTHRC1-203ENST00000520337 ARAP1Q96P48 1450 aa12.4□□□□□ -0.42
CTHRC1-203ENST00000520337 CHMP7Q8WUX9 453 aaPredicted RBP12.4□□□□□ -0.42
CTHRC1-203ENST00000520337 STAC3Q96MF2 364 aa12.4□□□□□ -0.42
CTHRC1-203ENST00000520337 HCSTQ9UBK5 93 aa12.4□□□□□ -0.42
CTHRC1-203ENST00000520337 CEP170Q5SW79 1584 aa12.39□□□□□ -0.43
CTHRC1-203ENST00000520337 ZBED2Q9BTP6 218 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms