RNA–Protein interactions for RNA: ENST00000512317.5

SPARCL1-207, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-207ENST00000512317 KCNH8Q96L42 1107 aa8.9□□□□□ -0.98
SPARCL1-207ENST00000512317 TOPBP1Q92547 1522 aa8.89□□□□□ -0.99
SPARCL1-207ENST00000512317 AMER1Q5JTC6 1135 aaPredicted RBP8.88□□□□□ -0.99
SPARCL1-207ENST00000512317 MFSD10Q14728 455 aa8.87□□□□□ -0.99
SPARCL1-207ENST00000512317 ADGRD1Q6QNK2 874 aa8.87□□□□□ -0.99
SPARCL1-207ENST00000512317 RAD54L2Q9Y4B4 1467 aa8.86□□□□□ -0.99
SPARCL1-207ENST00000512317 BBXQ8WY36 941 aaPredicted RBP8.86□□□□□ -0.99
SPARCL1-207ENST00000512317 AQRO60306 1485 aaKnown RBP eCLIP8.85□□□□□ -0.99
SPARCL1-207ENST00000512317 TK2O00142 265 aa8.85□□□□□ -0.99
SPARCL1-207ENST00000512317 PSEN2P49810 448 aa8.85□□□□□ -0.99
SPARCL1-207ENST00000512317 ZNF454Q8N9F8 522 aa8.85□□□□□ -0.99
SPARCL1-207ENST00000512317 EIF4G3O43432 1585 aaKnown RBP8.85□□□□□ -0.99
SPARCL1-207ENST00000512317 MAP3K9P80192 1104 aa8.84□□□□□ -0.99
SPARCL1-207ENST00000512317 EVI5O60447 810 aa8.83□□□□□ -1
SPARCL1-207ENST00000512317 DMRTA1Q5VZB9 504 aa8.83□□□□□ -1
SPARCL1-207ENST00000512317 KCNK17Q96T54 332 aa8.83□□□□□ -1
SPARCL1-207ENST00000512317 STAC3Q96MF2 364 aa8.82□□□□□ -1
SPARCL1-207ENST00000512317 ANO8Q9HCE9 1232 aaPredicted RBP8.82□□□□□ -1
SPARCL1-207ENST00000512317 RIMBP3CA6NJZ7 1639 aa8.82□□□□□ -1
SPARCL1-207ENST00000512317 RIMBP3BA6NNM3 1639 aa8.82□□□□□ -1
SPARCL1-207ENST00000512317 RIMBP3Q9UFD9 1639 aa8.82□□□□□ -1
SPARCL1-207ENST00000512317 IFT140Q96RY7 1462 aa8.82□□□□□ -1
SPARCL1-207ENST00000512317 PRDM2Q13029 1718 aa8.81□□□□□ -1
SPARCL1-207ENST00000512317 FOSBP53539 338 aa8.81□□□□□ -1
SPARCL1-207ENST00000512317 CADPS2Q86UW7 1296 aa8.81□□□□□ -1
SPARCL1-207ENST00000512317 JPH4Q96JJ6 628 aa8.81□□□□□ -1
SPARCL1-207ENST00000512317 POLA1P09884 1462 aaPredicted RBP8.81□□□□□ -1
SPARCL1-207ENST00000512317 DNMBPQ6XZF7 1577 aa8.81□□□□□ -1
SPARCL1-207ENST00000512317 BCL2L12Q9HB09 334 aa8.8□□□□□ -1
SPARCL1-207ENST00000512317 TARBP1Q13395 1621 aaKnown RBP8.8□□□□□ -1
SPARCL1-207ENST00000512317 TDRD9Q8NDG6 1382 aaKnown RBP8.79□□□□□ -1
SPARCL1-207ENST00000512317 PTPREP23469 700 aa8.79□□□□□ -1
SPARCL1-207ENST00000512317 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.79□□□□□ -1
SPARCL1-207ENST00000512317 ARHGEF11O15085 1522 aa8.79□□□□□ -1
SPARCL1-207ENST00000512317 SUPT5HO00267 1087 aaKnown RBP8.78□□□□□ -1
SPARCL1-207ENST00000512317 HRO43593 1189 aa8.78□□□□□ -1
SPARCL1-207ENST00000512317 EMILIN3Q9NT22 766 aa8.78□□□□□ -1
SPARCL1-207ENST00000512317 CUX1P39880 1505 aa8.78□□□□□ -1
SPARCL1-207ENST00000512317 SPRYD3Q8NCJ5 442 aa8.77□□□□□ -1.01
SPARCL1-207ENST00000512317 ZDHHC16Q969W1 377 aa8.77□□□□□ -1.01
SPARCL1-207ENST00000512317 HCSTQ9UBK5 93 aa8.77□□□□□ -1.01
SPARCL1-207ENST00000512317 FGD5Q6ZNL6 1462 aa8.77□□□□□ -1.01
SPARCL1-207ENST00000512317 CHD1O14646 1710 aa8.76□□□□□ -1.01
SPARCL1-207ENST00000512317 SNAPC4Q5SXM2 1469 aa8.76□□□□□ -1.01
SPARCL1-207ENST00000512317 SLC4A5Q9BY07 1137 aa8.75□□□□□ -1.01
SPARCL1-207ENST00000512317 RTN4Q9NQC3 1192 aaKnown RBP8.75□□□□□ -1.01
SPARCL1-207ENST00000512317 VPS9D1Q9Y2B5 631 aa8.75□□□□□ -1.01
SPARCL1-207ENST00000512317 ARAP1Q96P48 1450 aa8.75□□□□□ -1.01
SPARCL1-207ENST00000512317 CAMK2BQ13554 666 aa8.73□□□□□ -1.01
SPARCL1-207ENST00000512317 CYB5RLQ6IPT4 315 aa8.72□□□□□ -1.01
SPARCL1-207ENST00000512317 ADAM33Q9BZ11 813 aa8.72□□□□□ -1.01
SPARCL1-207ENST00000512317 SOGA1O94964 1423 aa8.71□□□□□ -1.01
SPARCL1-207ENST00000512317 FBXW7Q969H0 707 aa8.71□□□□□ -1.02
SPARCL1-207ENST00000512317 KCTD12Q96CX2 325 aaKnown RBP8.71□□□□□ -1.02
SPARCL1-207ENST00000512317 PHF14O94880 888 aa8.7□□□□□ -1.02
SPARCL1-207ENST00000512317 TYW1BQ6NUM6 668 aa8.7□□□□□ -1.02
SPARCL1-207ENST00000512317 ZBED2Q9BTP6 218 aa8.7□□□□□ -1.02
SPARCL1-207ENST00000512317 PCDHGA10Q9Y5H3 936 aa8.7□□□□□ -1.02
SPARCL1-207ENST00000512317 DPYSL4O14531 572 aa8.69□□□□□ -1.02
SPARCL1-207ENST00000512317 PPP1R3GB7ZBB8 358 aa8.68□□□□□ -1.02
SPARCL1-207ENST00000512317 CFAP44Q96MT7 982 aa8.68□□□□□ -1.02
SPARCL1-207ENST00000512317 ABCC8Q09428 1581 aa8.68□□□□□ -1.02
SPARCL1-207ENST00000512317 ERCC6L2Q5T890 1561 aa8.68□□□□□ -1.02
SPARCL1-207ENST00000512317 GOLGA8CPA6NN73 597 aa8.67□□□□□ -1.02
SPARCL1-207ENST00000512317 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
SPARCL1-207ENST00000512317 MRPL50Q8N5N7 158 aaKnown RBP8.67□□□□□ -1.02
SPARCL1-207ENST00000512317 EPAS1Q99814 870 aa8.67□□□□□ -1.02
SPARCL1-207ENST00000512317 NBPF3Q9H094 633 aa8.67□□□□□ -1.02
SPARCL1-207ENST00000512317 WDR97A6NE52 1622 aa8.66□□□□□ -1.02
SPARCL1-207ENST00000512317 CLASP1Q7Z460 1538 aa8.66□□□□□ -1.02
SPARCL1-207ENST00000512317 BHMG1C9JSJ3 638 aaPredicted RBP8.66□□□□□ -1.02
SPARCL1-207ENST00000512317 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
SPARCL1-207ENST00000512317 SYNJ1O43426 1573 aa8.65□□□□□ -1.03
SPARCL1-207ENST00000512317 WDR70Q9NW82 654 aa8.64□□□□□ -1.03
SPARCL1-207ENST00000512317 WNT2BQ93097 391 aa8.62□□□□□ -1.03
SPARCL1-207ENST00000512317 RABGEF1Q9UJ41 708 aa8.62□□□□□ -1.03
SPARCL1-207ENST00000512317 GRIN2BQ13224 1484 aa8.62□□□□□ -1.03
SPARCL1-207ENST00000512317 ABCA5Q8WWZ7 1642 aa8.62□□□□□ -1.03
SPARCL1-207ENST00000512317 SPDYE16A6NNV3 312 aaPredicted RBP8.61□□□□□ -1.03
SPARCL1-207ENST00000512317 COL9A1P20849 921 aa8.61□□□□□ -1.03
SPARCL1-207ENST00000512317 PTPN5P54829 565 aa8.61□□□□□ -1.03
SPARCL1-207ENST00000512317 PDIA6Q15084 440 aa8.61□□□□□ -1.03
SPARCL1-207ENST00000512317 E2F4Q16254 413 aa8.61□□□□□ -1.03
SPARCL1-207ENST00000512317 THSD4Q6ZMP0 1018 aa8.61□□□□□ -1.03
SPARCL1-207ENST00000512317 DDX12PQ92771 950 aa8.61□□□□□ -1.03
SPARCL1-207ENST00000512317 GAPVD1Q14C86 1478 aa8.61□□□□□ -1.03
SPARCL1-207ENST00000512317 PBRM1Q86U86 1689 aa8.61□□□□□ -1.03
SPARCL1-207ENST00000512317 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
SPARCL1-207ENST00000512317 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
SPARCL1-207ENST00000512317 ABCA10Q8WWZ4 1543 aa8.59□□□□□ -1.03
SPARCL1-207ENST00000512317 SYNJ2O15056 1496 aa8.59□□□□□ -1.03
SPARCL1-207ENST00000512317 PROX2Q3B8N5 592 aa8.59□□□□□ -1.03
SPARCL1-207ENST00000512317 RBM33Q96EV2 1170 aaKnown RBP8.59□□□□□ -1.03
SPARCL1-207ENST00000512317 MAGI1Q96QZ7 1491 aaPredicted RBP8.58□□□□□ -1.04
SPARCL1-207ENST00000512317 ADAMTS12P58397 1594 aa8.58□□□□□ -1.04
SPARCL1-207ENST00000512317 CEP170Q5SW79 1584 aa8.58□□□□□ -1.04
SPARCL1-207ENST00000512317 ONECUT3O60422 494 aaPredicted RBP8.58□□□□□ -1.04
SPARCL1-207ENST00000512317 NBR1Q14596 966 aa8.58□□□□□ -1.04
SPARCL1-207ENST00000512317 LAPTM4BQ86VI4 370 aa8.57□□□□□ -1.04
SPARCL1-207ENST00000512317 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms