RNA–Protein interactions for RNA: ENST00000507965.5

ATXN3-210, Transcript of ataxin 3, humanhuman

TSL 2

Gene ATXN3, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-210ENST00000507965 PKD2Q13563 968 aa10.23□□□□□ -0.77
ATXN3-210ENST00000507965 SOGA1O94964 1423 aa10.23□□□□□ -0.77
ATXN3-210ENST00000507965 SYNJ1O43426 1573 aa10.22□□□□□ -0.77
ATXN3-210ENST00000507965 ABCA5Q8WWZ7 1642 aa10.22□□□□□ -0.77
ATXN3-210ENST00000507965 PPP1R37O75864 691 aa10.22□□□□□ -0.77
ATXN3-210ENST00000507965 ADGRD1Q6QNK2 874 aa10.22□□□□□ -0.77
ATXN3-210ENST00000507965 HCSTQ9UBK5 93 aa10.22□□□□□ -0.77
ATXN3-210ENST00000507965 PLA2G2EQ9NZK7 142 aa10.21□□□□□ -0.77
ATXN3-210ENST00000507965 MAGI1Q96QZ7 1491 aaPredicted RBP10.2□□□□□ -0.78
ATXN3-210ENST00000507965 CYB5RLQ6IPT4 315 aa10.19□□□□□ -0.78
ATXN3-210ENST00000507965 GRIN2BQ13224 1484 aa10.18□□□□□ -0.78
ATXN3-210ENST00000507965 PTCD2Q8WV60 388 aaKnown RBP10.18□□□□□ -0.78
ATXN3-210ENST00000507965 SYNJ2O15056 1496 aa10.17□□□□□ -0.78
ATXN3-210ENST00000507965 BIVM-ERCC5R4GMW8 1640 aa10.16□□□□□ -0.78
ATXN3-210ENST00000507965 TK2O00142 265 aa10.15□□□□□ -0.78
ATXN3-210ENST00000507965 TBC1D12O60347 775 aa10.15□□□□□ -0.78
ATXN3-210ENST00000507965 PLPP6Q8IY26 295 aa10.15□□□□□ -0.78
ATXN3-210ENST00000507965 ADAMTS12P58397 1594 aa10.14□□□□□ -0.79
ATXN3-210ENST00000507965 KDM4FA0A1W2PPD8 638 aa10.14□□□□□ -0.79
ATXN3-210ENST00000507965 PSEN2P49810 448 aa10.14□□□□□ -0.79
ATXN3-210ENST00000507965 FOXK1P85037 733 aa10.14□□□□□ -0.79
ATXN3-210ENST00000507965 PPP4R3BQ5MIZ7 849 aa10.14□□□□□ -0.79
ATXN3-210ENST00000507965 STAC3Q96MF2 364 aa10.14□□□□□ -0.79
ATXN3-210ENST00000507965 GAPVD1Q14C86 1478 aa10.14□□□□□ -0.79
ATXN3-210ENST00000507965 ABCA10Q8WWZ4 1543 aa10.13□□□□□ -0.79
ATXN3-210ENST00000507965 DMRTA1Q5VZB9 504 aa10.13□□□□□ -0.79
ATXN3-210ENST00000507965 GPHNQ9NQX3 736 aaPredicted RBP10.13□□□□□ -0.79
ATXN3-210ENST00000507965 ERCC6L2Q5T890 1561 aa10.13□□□□□ -0.79
ATXN3-210ENST00000507965 TOP2BQ02880 1626 aa10.11□□□□□ -0.79
ATXN3-210ENST00000507965 CEP170Q5SW79 1584 aa10.11□□□□□ -0.79
ATXN3-210ENST00000507965 KCNH8Q96L42 1107 aa10.11□□□□□ -0.79
ATXN3-210ENST00000507965 HRO43593 1189 aa10.1□□□□□ -0.79
ATXN3-210ENST00000507965 DSG2Q14126 1118 aa10.09□□□□□ -0.79
ATXN3-210ENST00000507965 CHMP7Q8WUX9 453 aaPredicted RBP10.09□□□□□ -0.79
ATXN3-210ENST00000507965 SHROOM2Q13796 1616 aa10.08□□□□□ -0.8
ATXN3-210ENST00000507965 KCTD12Q96CX2 325 aaKnown RBP10.08□□□□□ -0.8
ATXN3-210ENST00000507965 GRIN2AQ12879 1464 aa10.08□□□□□ -0.8
ATXN3-210ENST00000507965 HS6ST3Q8IZP7 471 aa10.06□□□□□ -0.8
ATXN3-210ENST00000507965 KCNK17Q96T54 332 aa10.06□□□□□ -0.8
ATXN3-210ENST00000507965 SUPT5HO00267 1087 aaKnown RBP10.04□□□□□ -0.8
ATXN3-210ENST00000507965 KIF13AQ9H1H9 1805 aa10.04□□□□□ -0.8
ATXN3-210ENST00000507965 NUP160Q12769 1436 aa10.03□□□□□ -0.8
ATXN3-210ENST00000507965 WRNQ14191 1432 aaPredicted RBP eCLIP10.03□□□□□ -0.8
ATXN3-210ENST00000507965 RUSC2Q8N2Y8 1516 aa10.02□□□□□ -0.8
ATXN3-210ENST00000507965 ERICH3Q5RHP9 1530 aa10.02□□□□□ -0.81
ATXN3-210ENST00000507965 CHGAP10645 457 aaKnown RBP10.01□□□□□ -0.81
ATXN3-210ENST00000507965 ZNF454Q8N9F8 522 aa10□□□□□ -0.81
ATXN3-210ENST00000507965 UPF1Q92900 1129 aaKnown RBP eCLIP10□□□□□ -0.81
ATXN3-210ENST00000507965 PTPN5P54829 565 aa9.99□□□□□ -0.81
ATXN3-210ENST00000507965 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
ATXN3-210ENST00000507965 VPS9D1Q9Y2B5 631 aa9.99□□□□□ -0.81
ATXN3-210ENST00000507965 FHAD1B1AJZ9 1412 aa9.99□□□□□ -0.81
ATXN3-210ENST00000507965 RYDENQ9NUL5 291 aaKnown RBP9.97□□□□□ -0.81
ATXN3-210ENST00000507965 BCL2L12Q9HB09 334 aa9.95□□□□□ -0.82
ATXN3-210ENST00000507965 GOLGA8CPA6NN73 597 aa9.94□□□□□ -0.82
ATXN3-210ENST00000507965 PTPREP23469 700 aa9.94□□□□□ -0.82
ATXN3-210ENST00000507965 PPP1R15BQ5SWA1 713 aa9.94□□□□□ -0.82
ATXN3-210ENST00000507965 SLC4A5Q9BY07 1137 aa9.93□□□□□ -0.82
ATXN3-210ENST00000507965 CUL7Q14999 1698 aa9.93□□□□□ -0.82
ATXN3-210ENST00000507965 ADCY10Q96PN6 1610 aa9.93□□□□□ -0.82
ATXN3-210ENST00000507965 CRISPLD2Q9H0B8 497 aa9.92□□□□□ -0.82
ATXN3-210ENST00000507965 PRG4Q92954 1404 aaPredicted RBP9.91□□□□□ -0.82
ATXN3-210ENST00000507965 FOSBP53539 338 aa9.91□□□□□ -0.82
ATXN3-210ENST00000507965 DIP2BQ9P265 1576 aa9.9□□□□□ -0.82
ATXN3-210ENST00000507965 PDE4AP27815 886 aa9.9□□□□□ -0.82
ATXN3-210ENST00000507965 NKX1-1Q15270 411 aaPredicted RBP9.9□□□□□ -0.82
ATXN3-210ENST00000507965 MRPL50Q8N5N7 158 aaKnown RBP9.9□□□□□ -0.82
ATXN3-210ENST00000507965 BHMG1C9JSJ3 638 aaPredicted RBP9.89□□□□□ -0.83
ATXN3-210ENST00000507965 THSD4Q6ZMP0 1018 aa9.89□□□□□ -0.83
ATXN3-210ENST00000507965 WNT2BQ93097 391 aa9.88□□□□□ -0.83
ATXN3-210ENST00000507965 TSPOAP1O95153 1857 aa9.87□□□□□ -0.83
ATXN3-210ENST00000507965 JPH4Q96JJ6 628 aa9.87□□□□□ -0.83
ATXN3-210ENST00000507965 ZBED2Q9BTP6 218 aa9.87□□□□□ -0.83
ATXN3-210ENST00000507965 MAPKBP1O60336 1514 aa9.87□□□□□ -0.83
ATXN3-210ENST00000507965 EVI5O60447 810 aa9.86□□□□□ -0.83
ATXN3-210ENST00000507965 RGS20O76081 388 aa9.86□□□□□ -0.83
ATXN3-210ENST00000507965 IFFO2Q5TF58 517 aa9.86□□□□□ -0.83
ATXN3-210ENST00000507965 ZDHHC16Q969W1 377 aa9.86□□□□□ -0.83
ATXN3-210ENST00000507965 NBPF3Q9H094 633 aa9.86□□□□□ -0.83
ATXN3-210ENST00000507965 ANO8Q9HCE9 1232 aaPredicted RBP9.85□□□□□ -0.83
ATXN3-210ENST00000507965 NCKAP5LQ9HCH0 1330 aa9.84□□□□□ -0.83
ATXN3-210ENST00000507965 ADAM33Q9BZ11 813 aa9.83□□□□□ -0.84
ATXN3-210ENST00000507965 ABCC10Q5T3U5 1492 aa9.83□□□□□ -0.84
ATXN3-210ENST00000507965 KIAA0586Q9BVV6 1533 aa9.82□□□□□ -0.84
ATXN3-210ENST00000507965 MAP3K9P80192 1104 aa9.82□□□□□ -0.84
ATXN3-210ENST00000507965 LARP6Q9BRS8 491 aaKnown RBP9.82□□□□□ -0.84
ATXN3-210ENST00000507965 KDM6BO15054 1643 aa9.82□□□□□ -0.84
ATXN3-210ENST00000507965 DDX27Q96GQ7 796 aaKnown RBP9.81□□□□□ -0.84
ATXN3-210ENST00000507965 IRX2Q9BZI1 471 aaPredicted RBP9.81□□□□□ -0.84
ATXN3-210ENST00000507965 KIF27Q86VH2 1401 aa9.81□□□□□ -0.84
ATXN3-210ENST00000507965 PPRC1Q5VV67 1664 aaKnown RBP9.8□□□□□ -0.84
ATXN3-210ENST00000507965 IQGAP2Q13576 1575 aa9.8□□□□□ -0.84
ATXN3-210ENST00000507965 A0A0G2JS52 829 aa9.8□□□□□ -0.84
ATXN3-210ENST00000507965 IGF1RP08069 1367 aa9.79□□□□□ -0.84
ATXN3-210ENST00000507965 CTTNBP2Q8WZ74 1663 aa9.77□□□□□ -0.84
ATXN3-210ENST00000507965 PPP1R3GB7ZBB8 358 aa9.76□□□□□ -0.85
ATXN3-210ENST00000507965 ANKK1Q8NFD2 765 aa9.76□□□□□ -0.85
ATXN3-210ENST00000507965 FAM69CQ0P6D2 419 aa9.75□□□□□ -0.85
ATXN3-210ENST00000507965 RABGEF1Q9UJ41 708 aa9.75□□□□□ -0.85
ATXN3-210ENST00000507965 ABCC2Q92887 1545 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms