RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 POTECB2RU33 542 aa7.74□□□□□ -1.17
CNTN3-202ENST00000477856 VASPP50552 380 aaPredicted RBP7.74□□□□□ -1.17
CNTN3-202ENST00000477856 PRDM2Q13029 1718 aa7.74□□□□□ -1.17
CNTN3-202ENST00000477856 NESP48681 1621 aa7.74□□□□□ -1.17
CNTN3-202ENST00000477856 PDS5BQ9NTI5 1447 aa7.73□□□□□ -1.17
CNTN3-202ENST00000477856 ZNF454Q8N9F8 522 aa7.73□□□□□ -1.17
CNTN3-202ENST00000477856 SUZ12Q15022 739 aaKnown RBP7.72□□□□□ -1.17
CNTN3-202ENST00000477856 FBXO22Q8NEZ5 403 aa7.72□□□□□ -1.17
CNTN3-202ENST00000477856 TRIM41Q8WV44 630 aa7.72□□□□□ -1.17
CNTN3-202ENST00000477856 SPOCK2Q92563 424 aa7.72□□□□□ -1.17
CNTN3-202ENST00000477856 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.71□□□□□ -1.18
CNTN3-202ENST00000477856 SOWAHBA6NEL2 793 aa7.71□□□□□ -1.18
CNTN3-202ENST00000477856 ZFP91Q96JP5 570 aaPredicted RBP7.71□□□□□ -1.18
CNTN3-202ENST00000477856 WBP1LQ9NX94 342 aa7.71□□□□□ -1.18
CNTN3-202ENST00000477856 ERCC6Q03468 1493 aa7.7□□□□□ -1.18
CNTN3-202ENST00000477856 FANCD2Q9BXW9 1451 aa7.68□□□□□ -1.18
CNTN3-202ENST00000477856 KIF21AQ7Z4S6 1674 aa7.68□□□□□ -1.18
CNTN3-202ENST00000477856 WFS1O76024 890 aa7.68□□□□□ -1.18
CNTN3-202ENST00000477856 PKDCCQ504Y2 493 aa7.68□□□□□ -1.18
CNTN3-202ENST00000477856 CEP164Q9UPV0 1460 aa7.68□□□□□ -1.18
CNTN3-202ENST00000477856 RIOK3O14730 519 aaKnown RBP7.66□□□□□ -1.18
CNTN3-202ENST00000477856 MYT1Q01538 1121 aa7.66□□□□□ -1.18
CNTN3-202ENST00000477856 VGFO15240 615 aaPredicted RBP7.65□□□□□ -1.18
CNTN3-202ENST00000477856 RABGEF1Q9UJ41 708 aa7.65□□□□□ -1.18
CNTN3-202ENST00000477856 MRC2Q9UBG0 1479 aa7.64□□□□□ -1.19
CNTN3-202ENST00000477856 DGAT1O75907 488 aa7.64□□□□□ -1.19
CNTN3-202ENST00000477856 FKBP8Q14318 412 aa7.64□□□□□ -1.19
CNTN3-202ENST00000477856 PPP1R18Q6NYC8 613 aa7.64□□□□□ -1.19
CNTN3-202ENST00000477856 THOC2Q8NI27 1593 aaKnown RBP7.63□□□□□ -1.19
CNTN3-202ENST00000477856 LAPTM4BQ86VI4 370 aa7.63□□□□□ -1.19
CNTN3-202ENST00000477856 PLPP6Q8IY26 295 aa7.63□□□□□ -1.19
CNTN3-202ENST00000477856 WIPF1O43516 503 aa7.62□□□□□ -1.19
CNTN3-202ENST00000477856 ABCC8Q09428 1581 aa7.62□□□□□ -1.19
CNTN3-202ENST00000477856 WDR62O43379 1518 aa7.62□□□□□ -1.19
CNTN3-202ENST00000477856 ZFRQ96KR1 1074 aaKnown RBP7.61□□□□□ -1.19
CNTN3-202ENST00000477856 DNMBPQ6XZF7 1577 aa7.6□□□□□ -1.19
CNTN3-202ENST00000477856 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.6□□□□□ -1.19
CNTN3-202ENST00000477856 TSR3Q9UJK0 312 aaKnown RBP7.6□□□□□ -1.19
CNTN3-202ENST00000477856 FAM181BA6NEQ2 426 aa7.59□□□□□ -1.19
CNTN3-202ENST00000477856 FOSBP53539 338 aa7.59□□□□□ -1.19
CNTN3-202ENST00000477856 MFRPQ9BY79 579 aa7.59□□□□□ -1.19
CNTN3-202ENST00000477856 CUX2O14529 1486 aa7.59□□□□□ -1.19
CNTN3-202ENST00000477856 URB2Q14146 1524 aaKnown RBP7.58□□□□□ -1.2
CNTN3-202ENST00000477856 FOXK1P85037 733 aa7.58□□□□□ -1.2
CNTN3-202ENST00000477856 WRNQ14191 1432 aaPredicted RBP eCLIP7.57□□□□□ -1.2
CNTN3-202ENST00000477856 TOPBP1Q92547 1522 aa7.57□□□□□ -1.2
CNTN3-202ENST00000477856 HPS5Q9UPZ3 1129 aa7.56□□□□□ -1.2
CNTN3-202ENST00000477856 CUX1P39880 1505 aa7.56□□□□□ -1.2
CNTN3-202ENST00000477856 TOP2BQ02880 1626 aa7.55□□□□□ -1.2
CNTN3-202ENST00000477856 BIVM-ERCC5R4GMW8 1640 aa7.55□□□□□ -1.2
CNTN3-202ENST00000477856 TJAP1Q5JTD0 557 aa7.54□□□□□ -1.2
CNTN3-202ENST00000477856 ZDHHC16Q969W1 377 aa7.54□□□□□ -1.2
CNTN3-202ENST00000477856 PROX2Q3B8N5 592 aa7.53□□□□□ -1.2
CNTN3-202ENST00000477856 BCL11BQ9C0K0 894 aaPredicted RBP7.53□□□□□ -1.2
CNTN3-202ENST00000477856 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.53□□□□□ -1.2
CNTN3-202ENST00000477856 SYNJ1O43426 1573 aa7.53□□□□□ -1.2
CNTN3-202ENST00000477856 FGD5Q6ZNL6 1462 aa7.52□□□□□ -1.21
CNTN3-202ENST00000477856 LRCH3Q96II8 777 aa7.52□□□□□ -1.21
CNTN3-202ENST00000477856 ADAM33Q9BZ11 813 aa7.52□□□□□ -1.21
CNTN3-202ENST00000477856 POLA1P09884 1462 aaPredicted RBP7.51□□□□□ -1.21
CNTN3-202ENST00000477856 IFT140Q96RY7 1462 aa7.51□□□□□ -1.21
CNTN3-202ENST00000477856 PPP1R3GB7ZBB8 358 aa7.51□□□□□ -1.21
CNTN3-202ENST00000477856 GGCXP38435 758 aa7.51□□□□□ -1.21
CNTN3-202ENST00000477856 NFX1Q12986 1120 aaKnown RBP7.5□□□□□ -1.21
CNTN3-202ENST00000477856 JPH4Q96JJ6 628 aa7.5□□□□□ -1.21
CNTN3-202ENST00000477856 IL21Q9HBE4 155 aa7.5□□□□□ -1.21
CNTN3-202ENST00000477856 STK24Q9Y6E0 443 aa7.5□□□□□ -1.21
CNTN3-202ENST00000477856 WDR97A6NE52 1622 aa7.49□□□□□ -1.21
CNTN3-202ENST00000477856 FAM187AA6NFU0 413 aa7.49□□□□□ -1.21
CNTN3-202ENST00000477856 TRIM67Q6ZTA4 783 aa7.49□□□□□ -1.21
CNTN3-202ENST00000477856 RNF25Q96BH1 459 aaPredicted RBP7.49□□□□□ -1.21
CNTN3-202ENST00000477856 KIAA1468Q9P260 1216 aa7.49□□□□□ -1.21
CNTN3-202ENST00000477856 PPP4CP60510 307 aa7.48□□□□□ -1.21
CNTN3-202ENST00000477856 IFNLR1Q8IU57 520 aaPredicted RBP7.48□□□□□ -1.21
CNTN3-202ENST00000477856 OXER1Q8TDS5 423 aa7.48□□□□□ -1.21
CNTN3-202ENST00000477856 UPF1Q92900 1129 aaKnown RBP eCLIP7.48□□□□□ -1.21
CNTN3-202ENST00000477856 GPHNQ9NQX3 736 aaPredicted RBP7.48□□□□□ -1.21
CNTN3-202ENST00000477856 TAOK2Q9UL54 1235 aa7.48□□□□□ -1.21
CNTN3-202ENST00000477856 TARBP1Q13395 1621 aaKnown RBP7.48□□□□□ -1.21
CNTN3-202ENST00000477856 SOGA1O94964 1423 aa7.47□□□□□ -1.21
CNTN3-202ENST00000477856 DSG2Q14126 1118 aa7.47□□□□□ -1.21
CNTN3-202ENST00000477856 ST8SIA5O15466 376 aa7.46□□□□□ -1.22
CNTN3-202ENST00000477856 MTRQ99707 1265 aa7.46□□□□□ -1.22
CNTN3-202ENST00000477856 AAASQ9NRG9 546 aa7.46□□□□□ -1.22
CNTN3-202ENST00000477856 SEPT9Q9UHD8 586 aaPredicted RBP7.46□□□□□ -1.22
CNTN3-202ENST00000477856 ABCA10Q8WWZ4 1543 aa7.46□□□□□ -1.22
CNTN3-202ENST00000477856 RAD54L2Q9Y4B4 1467 aa7.45□□□□□ -1.22
CNTN3-202ENST00000477856 C11orf95C9JLR9 678 aaPredicted RBP7.45□□□□□ -1.22
CNTN3-202ENST00000477856 EIF4G3O43432 1585 aaKnown RBP7.45□□□□□ -1.22
CNTN3-202ENST00000477856 PRR20EP86478 221 aa7.44□□□□□ -1.22
CNTN3-202ENST00000477856 PRR20CP86479 221 aa7.44□□□□□ -1.22
CNTN3-202ENST00000477856 PRR20DP86480 221 aa7.44□□□□□ -1.22
CNTN3-202ENST00000477856 PRR20BP86481 221 aa7.44□□□□□ -1.22
CNTN3-202ENST00000477856 PRR20AP86496 221 aa7.44□□□□□ -1.22
CNTN3-202ENST00000477856 FAM98CQ17RN3 349 aaKnown RBP7.44□□□□□ -1.22
CNTN3-202ENST00000477856 ZNF608Q9ULD9 1512 aaPredicted RBP7.42□□□□□ -1.22
CNTN3-202ENST00000477856 ABCA5Q8WWZ7 1642 aa7.42□□□□□ -1.22
CNTN3-202ENST00000477856 SLC19A1P41440 591 aa7.42□□□□□ -1.22
CNTN3-202ENST00000477856 TMUB1Q9BVT8 246 aa7.42□□□□□ -1.22
CNTN3-202ENST00000477856 ONECUT3O60422 494 aaPredicted RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms