RNA–Protein interactions for RNA: ENST00000477856.1

CNTN3-202, Transcript of contactin 3, humanhuman

TSL 3

Gene CNTN3, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3-202ENST00000477856 AEBP2Q6ZN18 517 aaPredicted RBP20.86■□□□□ 0.93
CNTN3-202ENST00000477856 CHIC1Q5VXU3 224 aa19.6■□□□□ 0.73
CNTN3-202ENST00000477856 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
CNTN3-202ENST00000477856 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
CNTN3-202ENST00000477856 POTEDQ86YR6 584 aa17.6■□□□□ 0.41
CNTN3-202ENST00000477856 FOXD1Q16676 465 aa16.9■□□□□ 0.3
CNTN3-202ENST00000477856 MSH5O43196 834 aa16.3■□□□□ 0.2
CNTN3-202ENST00000477856 PIAS4Q8N2W9 510 aaPredicted RBP15.61■□□□□ 0.09
CNTN3-202ENST00000477856 PPP6R1Q9UPN7 881 aa14.99□□□□□ -0.01
CNTN3-202ENST00000477856 ADRA2BP18089 450 aa14.92□□□□□ -0.02
CNTN3-202ENST00000477856 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
CNTN3-202ENST00000477856 PLPPR3Q6T4P5 718 aa14.66□□□□□ -0.06
CNTN3-202ENST00000477856 DMRT2Q9Y5R5 561 aa14.12□□□□□ -0.15
CNTN3-202ENST00000477856 MAPK8IP2Q13387 824 aaPredicted RBP14.01□□□□□ -0.17
CNTN3-202ENST00000477856 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
CNTN3-202ENST00000477856 RNF39Q9H2S5 420 aa13.76□□□□□ -0.21
CNTN3-202ENST00000477856 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
CNTN3-202ENST00000477856 POTEHQ6S545 545 aa13.63□□□□□ -0.23
CNTN3-202ENST00000477856 C1QBPQ07021 282 aaKnown RBP13.55□□□□□ -0.24
CNTN3-202ENST00000477856 HOXD11P31277 338 aaPredicted RBP13.18□□□□□ -0.3
CNTN3-202ENST00000477856 DNAJC5BQ9UF47 199 aa12.95□□□□□ -0.34
CNTN3-202ENST00000477856 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
CNTN3-202ENST00000477856 CNKSR2Q8WXI2 1034 aa12.71□□□□□ -0.37
CNTN3-202ENST00000477856 PPP4R3CPQ6ZMV5 832 aa12.69□□□□□ -0.38
CNTN3-202ENST00000477856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.38
CNTN3-202ENST00000477856 DSG3P32926 999 aa12.53□□□□□ -0.4
CNTN3-202ENST00000477856 CAPN15O75808 1086 aa12.45□□□□□ -0.42
CNTN3-202ENST00000477856 SPINK5Q9NQ38 1064 aaPredicted RBP12.33□□□□□ -0.44
CNTN3-202ENST00000477856 SP7Q8TDD2 431 aaPredicted RBP12.29□□□□□ -0.44
CNTN3-202ENST00000477856 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
CNTN3-202ENST00000477856 U3KPZ7 1027 aaPredicted RBP12.17□□□□□ -0.46
CNTN3-202ENST00000477856 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
CNTN3-202ENST00000477856 ABCB7O75027 752 aa12.02□□□□□ -0.49
CNTN3-202ENST00000477856 TRHP20396 242 aaPredicted RBP12□□□□□ -0.49
CNTN3-202ENST00000477856 NCBP3Q53F19 620 aaKnown RBP11.98□□□□□ -0.49
CNTN3-202ENST00000477856 ZNF219Q9P2Y4 722 aaPredicted RBP11.92□□□□□ -0.5
CNTN3-202ENST00000477856 APLP2Q06481 763 aa11.89□□□□□ -0.51
CNTN3-202ENST00000477856 HAX1O00165 279 aa11.81□□□□□ -0.52
CNTN3-202ENST00000477856 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
CNTN3-202ENST00000477856 NPM3O75607 178 aaKnown RBP11.68□□□□□ -0.54
CNTN3-202ENST00000477856 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
CNTN3-202ENST00000477856 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.6□□□□□ -0.55
CNTN3-202ENST00000477856 HNRNPUL2Q1KMD3 747 aaKnown RBP11.6□□□□□ -0.55
CNTN3-202ENST00000477856 LHX8Q68G74 356 aa11.54□□□□□ -0.56
CNTN3-202ENST00000477856 AKT1S1Q96B36 256 aa11.54□□□□□ -0.56
CNTN3-202ENST00000477856 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
CNTN3-202ENST00000477856 EVX2Q03828 476 aa11.44□□□□□ -0.58
CNTN3-202ENST00000477856 POLA2Q14181 598 aa11.42□□□□□ -0.58
CNTN3-202ENST00000477856 REM2Q8IYK8 340 aaPredicted RBP11.42□□□□□ -0.58
CNTN3-202ENST00000477856 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
CNTN3-202ENST00000477856 FXR2P51116 673 aaKnown RBP eCLIP11.38□□□□□ -0.59
CNTN3-202ENST00000477856 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
CNTN3-202ENST00000477856 GABBR2O75899 941 aa11.18□□□□□ -0.62
CNTN3-202ENST00000477856 ZBTB12Q9Y330 459 aaPredicted RBP11.14□□□□□ -0.63
CNTN3-202ENST00000477856 C19orf67A6NJJ6 358 aa11.07□□□□□ -0.64
CNTN3-202ENST00000477856 OSCARQ8IYS5 282 aa11.04□□□□□ -0.64
CNTN3-202ENST00000477856 PRKAR2AP13861 404 aaKnown RBP11.03□□□□□ -0.64
CNTN3-202ENST00000477856 POTEMA6NI47 508 aa10.92□□□□□ -0.66
CNTN3-202ENST00000477856 MYCNP04198 464 aaPredicted RBP10.87□□□□□ -0.67
CNTN3-202ENST00000477856 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
CNTN3-202ENST00000477856 POTEGQ6S5H5 508 aa10.85□□□□□ -0.67
CNTN3-202ENST00000477856 PCDH10Q9P2E7 1040 aa10.85□□□□□ -0.67
CNTN3-202ENST00000477856 CLEC11AQ9Y240 323 aa10.83□□□□□ -0.68
CNTN3-202ENST00000477856 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
CNTN3-202ENST00000477856 DCBLD2Q96PD2 775 aa10.76□□□□□ -0.69
CNTN3-202ENST00000477856 CLCN6P51797 869 aa10.73□□□□□ -0.69
CNTN3-202ENST00000477856 OTUD5Q96G74 571 aa10.7□□□□□ -0.7
CNTN3-202ENST00000477856 SPDYE2BA6NHP3 402 aa10.67□□□□□ -0.7
CNTN3-202ENST00000477856 SPDYE6P0CI01 402 aa10.67□□□□□ -0.7
CNTN3-202ENST00000477856 SPDYE2Q495Y8 402 aa10.67□□□□□ -0.7
CNTN3-202ENST00000477856 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
CNTN3-202ENST00000477856 ATF5Q9Y2D1 282 aaPredicted RBP10.63□□□□□ -0.71
CNTN3-202ENST00000477856 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
CNTN3-202ENST00000477856 KCNA4P22459 653 aa10.53□□□□□ -0.72
CNTN3-202ENST00000477856 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
CNTN3-202ENST00000477856 POTEB2H3BUK9 544 aa10.49□□□□□ -0.73
CNTN3-202ENST00000477856 NISCHQ9Y2I1 1504 aa10.47□□□□□ -0.73
CNTN3-202ENST00000477856 FBLN2P98095 1184 aa10.43□□□□□ -0.74
CNTN3-202ENST00000477856 ZNF692Q9BU19 519 aaPredicted RBP10.42□□□□□ -0.74
CNTN3-202ENST00000477856 FARP1Q9Y4F1 1045 aaPredicted RBP10.41□□□□□ -0.74
CNTN3-202ENST00000477856 FAM163AQ96GL9 167 aaPredicted RBP10.4□□□□□ -0.74
CNTN3-202ENST00000477856 ZNF579Q8NAF0 562 aaKnown RBP10.36□□□□□ -0.75
CNTN3-202ENST00000477856 SSUH2Q9Y2M2 353 aa10.34□□□□□ -0.75
CNTN3-202ENST00000477856 MAMSTRQ6ZN01 415 aa10.32□□□□□ -0.76
CNTN3-202ENST00000477856 ZRANB1Q9UGI0 708 aa10.32□□□□□ -0.76
CNTN3-202ENST00000477856 GALR2O43603 387 aaPredicted RBP10.3□□□□□ -0.76
CNTN3-202ENST00000477856 LCE2DQ5TA82 110 aaPredicted RBP10.29□□□□□ -0.76
CNTN3-202ENST00000477856 CDAN1Q8IWY9 1227 aa10.25□□□□□ -0.77
CNTN3-202ENST00000477856 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
CNTN3-202ENST00000477856 FOXD4L1Q9NU39 408 aa10.19□□□□□ -0.78
CNTN3-202ENST00000477856 PELP1Q8IZL8 1130 aaKnown RBP10.18□□□□□ -0.78
CNTN3-202ENST00000477856 SCUBE2Q9NQ36 999 aa10.18□□□□□ -0.78
CNTN3-202ENST00000477856 METRNQ9UJH8 293 aa10.17□□□□□ -0.78
CNTN3-202ENST00000477856 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
CNTN3-202ENST00000477856 C7P10643 843 aa10.15□□□□□ -0.78
CNTN3-202ENST00000477856 SLC39A7Q92504 469 aa10.13□□□□□ -0.79
CNTN3-202ENST00000477856 PAK3O75914 559 aaPredicted RBP10.08□□□□□ -0.8
CNTN3-202ENST00000477856 MMRN1Q13201 1228 aa10.08□□□□□ -0.8
CNTN3-202ENST00000477856 MKRN4PQ13434 485 aaPredicted RBP10.08□□□□□ -0.8
CNTN3-202ENST00000477856 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms