RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
PKNOX1-205ENST00000474336 IFFO2Q5TF58 517 aa12.86□□□□□ -0.35
PKNOX1-205ENST00000474336 LAMC3Q9Y6N6 1575 aa12.85□□□□□ -0.35
PKNOX1-205ENST00000474336 RGS20O76081 388 aa12.84□□□□□ -0.35
PKNOX1-205ENST00000474336 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
PKNOX1-205ENST00000474336 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
PKNOX1-205ENST00000474336 THSD4Q6ZMP0 1018 aa12.83□□□□□ -0.36
PKNOX1-205ENST00000474336 ZBED2Q9BTP6 218 aa12.83□□□□□ -0.36
PKNOX1-205ENST00000474336 CFTRP13569 1480 aa12.83□□□□□ -0.36
PKNOX1-205ENST00000474336 ABCC8Q09428 1581 aa12.82□□□□□ -0.36
PKNOX1-205ENST00000474336 PDE4AP27815 886 aa12.82□□□□□ -0.36
PKNOX1-205ENST00000474336 NESP48681 1621 aa12.81□□□□□ -0.36
PKNOX1-205ENST00000474336 MRPL50Q8N5N7 158 aaKnown RBP12.81□□□□□ -0.36
PKNOX1-205ENST00000474336 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
PKNOX1-205ENST00000474336 KIF21AQ7Z4S6 1674 aa12.8□□□□□ -0.36
PKNOX1-205ENST00000474336 WNT2BQ93097 391 aa12.8□□□□□ -0.36
PKNOX1-205ENST00000474336 JPH4Q96JJ6 628 aa12.8□□□□□ -0.36
PKNOX1-205ENST00000474336 EVI5O60447 810 aa12.79□□□□□ -0.36
PKNOX1-205ENST00000474336 NCKAP5LQ9HCH0 1330 aa12.79□□□□□ -0.36
PKNOX1-205ENST00000474336 ZDHHC16Q969W1 377 aa12.78□□□□□ -0.36
PKNOX1-205ENST00000474336 ADAM33Q9BZ11 813 aa12.75□□□□□ -0.37
PKNOX1-205ENST00000474336 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
PKNOX1-205ENST00000474336 FANCD2Q9BXW9 1451 aa12.73□□□□□ -0.37
PKNOX1-205ENST00000474336 A0A0G2JS52 829 aa12.73□□□□□ -0.37
PKNOX1-205ENST00000474336 SYNJ1O43426 1573 aa12.72□□□□□ -0.37
PKNOX1-205ENST00000474336 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
PKNOX1-205ENST00000474336 CEP164Q9UPV0 1460 aa12.71□□□□□ -0.38
PKNOX1-205ENST00000474336 BIVM-ERCC5R4GMW8 1640 aa12.7□□□□□ -0.38
PKNOX1-205ENST00000474336 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-205ENST00000474336 LARP6Q9BRS8 491 aaKnown RBP12.7□□□□□ -0.38
PKNOX1-205ENST00000474336 IRX2Q9BZI1 471 aaPredicted RBP12.7□□□□□ -0.38
PKNOX1-205ENST00000474336 WRNQ14191 1432 aaPredicted RBP eCLIP12.7□□□□□ -0.38
PKNOX1-205ENST00000474336 PDS5BQ9NTI5 1447 aa12.69□□□□□ -0.38
PKNOX1-205ENST00000474336 TOP2BQ02880 1626 aa12.66□□□□□ -0.38
PKNOX1-205ENST00000474336 PPP1R3GB7ZBB8 358 aa12.66□□□□□ -0.38
PKNOX1-205ENST00000474336 RABGEF1Q9UJ41 708 aa12.65□□□□□ -0.38
PKNOX1-205ENST00000474336 ERCC6Q03468 1493 aa12.65□□□□□ -0.38
PKNOX1-205ENST00000474336 CUX1P39880 1505 aa12.64□□□□□ -0.39
PKNOX1-205ENST00000474336 GTPBP6O43824 516 aaPredicted RBP12.64□□□□□ -0.39
PKNOX1-205ENST00000474336 MFSD10Q14728 455 aa12.64□□□□□ -0.39
PKNOX1-205ENST00000474336 PCDHGA10Q9Y5H3 936 aa12.64□□□□□ -0.39
PKNOX1-205ENST00000474336 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
PKNOX1-205ENST00000474336 DNMBPQ6XZF7 1577 aa12.63□□□□□ -0.39
PKNOX1-205ENST00000474336 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
PKNOX1-205ENST00000474336 PROX2Q3B8N5 592 aa12.6□□□□□ -0.39
PKNOX1-205ENST00000474336 ITGBL1O95965 494 aaPredicted RBP12.59□□□□□ -0.39
PKNOX1-205ENST00000474336 COL9A1P20849 921 aa12.59□□□□□ -0.39
PKNOX1-205ENST00000474336 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
PKNOX1-205ENST00000474336 LAPTM4BQ86VI4 370 aa12.58□□□□□ -0.4
PKNOX1-205ENST00000474336 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
PKNOX1-205ENST00000474336 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
PKNOX1-205ENST00000474336 TOPBP1Q92547 1522 aa12.57□□□□□ -0.4
PKNOX1-205ENST00000474336 THOC2Q8NI27 1593 aaKnown RBP12.57□□□□□ -0.4
PKNOX1-205ENST00000474336 TYW1BQ6NUM6 668 aa12.57□□□□□ -0.4
PKNOX1-205ENST00000474336 PHF14O94880 888 aa12.56□□□□□ -0.4
PKNOX1-205ENST00000474336 FGD5Q6ZNL6 1462 aa12.55□□□□□ -0.4
PKNOX1-205ENST00000474336 SOWAHBA6NEL2 793 aa12.55□□□□□ -0.4
PKNOX1-205ENST00000474336 BCAMP50895 628 aa12.55□□□□□ -0.4
PKNOX1-205ENST00000474336 NYAP1Q6ZVC0 841 aa12.54□□□□□ -0.4
PKNOX1-205ENST00000474336 KIAA1468Q9P260 1216 aa12.53□□□□□ -0.4
PKNOX1-205ENST00000474336 WDR62O43379 1518 aa12.52□□□□□ -0.4
PKNOX1-205ENST00000474336 ONECUT3O60422 494 aaPredicted RBP12.52□□□□□ -0.41
PKNOX1-205ENST00000474336 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
PKNOX1-205ENST00000474336 WDR97A6NE52 1622 aa12.51□□□□□ -0.41
PKNOX1-205ENST00000474336 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
PKNOX1-205ENST00000474336 EPAS1Q99814 870 aa12.49□□□□□ -0.41
PKNOX1-205ENST00000474336 FAM9AQ8IZU1 332 aaPredicted RBP12.48□□□□□ -0.41
PKNOX1-205ENST00000474336 C6orf132Q5T0Z8 1188 aa12.47□□□□□ -0.41
PKNOX1-205ENST00000474336 WBP1LQ9NX94 342 aa12.47□□□□□ -0.41
PKNOX1-205ENST00000474336 KCNC4Q03721 635 aa12.46□□□□□ -0.41
PKNOX1-205ENST00000474336 SOGA1O94964 1423 aa12.45□□□□□ -0.42
PKNOX1-205ENST00000474336 CADPS2Q86UW7 1296 aa12.45□□□□□ -0.42
PKNOX1-205ENST00000474336 SEPT9Q9UHD8 586 aaPredicted RBP12.44□□□□□ -0.42
PKNOX1-205ENST00000474336 RAD54L2Q9Y4B4 1467 aa12.44□□□□□ -0.42
PKNOX1-205ENST00000474336 RUSC2Q8N2Y8 1516 aa12.43□□□□□ -0.42
PKNOX1-205ENST00000474336 TRIM6-TRIM34B2RNG4 842 aa12.43□□□□□ -0.42
PKNOX1-205ENST00000474336 TARBP1Q13395 1621 aaKnown RBP12.43□□□□□ -0.42
PKNOX1-205ENST00000474336 PBRM1Q86U86 1689 aa12.42□□□□□ -0.42
PKNOX1-205ENST00000474336 CUX2O14529 1486 aa12.42□□□□□ -0.42
PKNOX1-205ENST00000474336 CAMK2BQ13554 666 aa12.42□□□□□ -0.42
PKNOX1-205ENST00000474336 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
PKNOX1-205ENST00000474336 Q6ZNB5 142 aa12.42□□□□□ -0.42
PKNOX1-205ENST00000474336 EEA1Q15075 1411 aa12.42□□□□□ -0.42
PKNOX1-205ENST00000474336 TSR3Q9UJK0 312 aaKnown RBP12.4□□□□□ -0.42
PKNOX1-205ENST00000474336 ABCA10Q8WWZ4 1543 aa12.4□□□□□ -0.42
PKNOX1-205ENST00000474336 KIF27Q86VH2 1401 aa12.39□□□□□ -0.43
PKNOX1-205ENST00000474336 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.39□□□□□ -0.43
PKNOX1-205ENST00000474336 ABCA5Q8WWZ7 1642 aa12.39□□□□□ -0.43
PKNOX1-205ENST00000474336 DPYSL4O14531 572 aa12.38□□□□□ -0.43
PKNOX1-205ENST00000474336 RBM33Q96EV2 1170 aaKnown RBP12.38□□□□□ -0.43
PKNOX1-205ENST00000474336 LRCH3Q96II8 777 aa12.38□□□□□ -0.43
PKNOX1-205ENST00000474336 HPS5Q9UPZ3 1129 aa12.37□□□□□ -0.43
PKNOX1-205ENST00000474336 IFT140Q96RY7 1462 aa12.37□□□□□ -0.43
PKNOX1-205ENST00000474336 EIF4G3O43432 1585 aaKnown RBP12.36□□□□□ -0.43
PKNOX1-205ENST00000474336 KIF21BO75037 1637 aa12.34□□□□□ -0.43
PKNOX1-205ENST00000474336 DDX12PQ92771 950 aa12.34□□□□□ -0.43
PKNOX1-205ENST00000474336 CUL7Q14999 1698 aa12.34□□□□□ -0.43
PKNOX1-205ENST00000474336 PACS2Q86VP3 889 aa12.33□□□□□ -0.44
PKNOX1-205ENST00000474336 LAPTM4AQ15012 233 aa12.32□□□□□ -0.44
PKNOX1-205ENST00000474336 GAPVD1Q14C86 1478 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms