RNA–Protein interactions for RNA: ENST00000438618.2

LINC00271-203, long intergenic non-protein coding RNA 271, humanhuman

TSL 3 BASIC

Gene LINC00271, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-203ENST00000438618 TARBP1Q13395 1621 aaKnown RBP12.66□□□□□ -0.38
LINC00271-203ENST00000438618 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
LINC00271-203ENST00000438618 DDX27Q96GQ7 796 aaKnown RBP12.66□□□□□ -0.38
LINC00271-203ENST00000438618 RTN4Q9NQC3 1192 aaKnown RBP12.66□□□□□ -0.38
LINC00271-203ENST00000438618 PBX2P40425 430 aa12.64□□□□□ -0.39
LINC00271-203ENST00000438618 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
LINC00271-203ENST00000438618 FGD5Q6ZNL6 1462 aa12.64□□□□□ -0.39
LINC00271-203ENST00000438618 EIF4G3O43432 1585 aaKnown RBP12.64□□□□□ -0.39
LINC00271-203ENST00000438618 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
LINC00271-203ENST00000438618 CUX1P39880 1505 aa12.62□□□□□ -0.39
LINC00271-203ENST00000438618 LSM11P83369 360 aaKnown RBP eCLIP12.62□□□□□ -0.39
LINC00271-203ENST00000438618 AXIN2Q9Y2T1 843 aa12.62□□□□□ -0.39
LINC00271-203ENST00000438618 PPP4R3BQ5MIZ7 849 aa12.61□□□□□ -0.39
LINC00271-203ENST00000438618 CYB5RLQ6IPT4 315 aa12.61□□□□□ -0.39
LINC00271-203ENST00000438618 OXER1Q8TDS5 423 aa12.61□□□□□ -0.39
LINC00271-203ENST00000438618 MYT1LQ9UL68 1186 aa12.6□□□□□ -0.39
LINC00271-203ENST00000438618 RNF166Q96A37 237 aaPredicted RBP12.59□□□□□ -0.39
LINC00271-203ENST00000438618 PTGER2P43116 358 aa12.58□□□□□ -0.4
LINC00271-203ENST00000438618 KDM4FA0A1W2PPD8 638 aa12.57□□□□□ -0.4
LINC00271-203ENST00000438618 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
LINC00271-203ENST00000438618 RIMBP3CA6NJZ7 1639 aa12.56□□□□□ -0.4
LINC00271-203ENST00000438618 RIMBP3BA6NNM3 1639 aa12.56□□□□□ -0.4
LINC00271-203ENST00000438618 RIMBP3Q9UFD9 1639 aa12.56□□□□□ -0.4
LINC00271-203ENST00000438618 MAP3K9P80192 1104 aa12.56□□□□□ -0.4
LINC00271-203ENST00000438618 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
LINC00271-203ENST00000438618 KCNH8Q96L42 1107 aa12.56□□□□□ -0.4
LINC00271-203ENST00000438618 GRIN2BQ13224 1484 aa12.55□□□□□ -0.4
LINC00271-203ENST00000438618 CADPS2Q86UW7 1296 aa12.55□□□□□ -0.4
LINC00271-203ENST00000438618 SNAPC4Q5SXM2 1469 aa12.54□□□□□ -0.4
LINC00271-203ENST00000438618 ARHGEF11O15085 1522 aa12.53□□□□□ -0.4
LINC00271-203ENST00000438618 MFSD10Q14728 455 aa12.53□□□□□ -0.4
LINC00271-203ENST00000438618 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
LINC00271-203ENST00000438618 ZNF454Q8N9F8 522 aa12.53□□□□□ -0.4
LINC00271-203ENST00000438618 CHD1O14646 1710 aa12.53□□□□□ -0.4
LINC00271-203ENST00000438618 GAPVD1Q14C86 1478 aa12.53□□□□□ -0.4
LINC00271-203ENST00000438618 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
LINC00271-203ENST00000438618 EVI5O60447 810 aa12.51□□□□□ -0.41
LINC00271-203ENST00000438618 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
LINC00271-203ENST00000438618 MAGI1Q96QZ7 1491 aaPredicted RBP12.51□□□□□ -0.41
LINC00271-203ENST00000438618 WDR97A6NE52 1622 aa12.51□□□□□ -0.41
LINC00271-203ENST00000438618 PSEN2P49810 448 aa12.5□□□□□ -0.41
LINC00271-203ENST00000438618 ABCA10Q8WWZ4 1543 aa12.49□□□□□ -0.41
LINC00271-203ENST00000438618 PAXIP1Q6ZW49 1069 aaPredicted RBP12.49□□□□□ -0.41
LINC00271-203ENST00000438618 KCNK17Q96T54 332 aa12.49□□□□□ -0.41
LINC00271-203ENST00000438618 STAC3Q96MF2 364 aa12.48□□□□□ -0.41
LINC00271-203ENST00000438618 SYNJ2O15056 1496 aa12.47□□□□□ -0.41
LINC00271-203ENST00000438618 ADGRD1Q6QNK2 874 aa12.47□□□□□ -0.41
LINC00271-203ENST00000438618 DMRTA1Q5VZB9 504 aa12.45□□□□□ -0.42
LINC00271-203ENST00000438618 EMILIN3Q9NT22 766 aa12.44□□□□□ -0.42
LINC00271-203ENST00000438618 TOP2BQ02880 1626 aa12.44□□□□□ -0.42
LINC00271-203ENST00000438618 SYNJ1O43426 1573 aa12.43□□□□□ -0.42
LINC00271-203ENST00000438618 FOSBP53539 338 aa12.42□□□□□ -0.42
LINC00271-203ENST00000438618 JPH4Q96JJ6 628 aa12.42□□□□□ -0.42
LINC00271-203ENST00000438618 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
LINC00271-203ENST00000438618 ARAP1Q96P48 1450 aa12.41□□□□□ -0.42
LINC00271-203ENST00000438618 TK2O00142 265 aa12.41□□□□□ -0.42
LINC00271-203ENST00000438618 PTPREP23469 700 aa12.41□□□□□ -0.42
LINC00271-203ENST00000438618 PBRM1Q86U86 1689 aa12.41□□□□□ -0.42
LINC00271-203ENST00000438618 BIVM-ERCC5R4GMW8 1640 aa12.4□□□□□ -0.42
LINC00271-203ENST00000438618 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
LINC00271-203ENST00000438618 CLASP1Q7Z460 1538 aa12.4□□□□□ -0.42
LINC00271-203ENST00000438618 ABCA5Q8WWZ7 1642 aa12.4□□□□□ -0.42
LINC00271-203ENST00000438618 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
LINC00271-203ENST00000438618 FHAD1B1AJZ9 1412 aa12.37□□□□□ -0.43
LINC00271-203ENST00000438618 WDR70Q9NW82 654 aa12.37□□□□□ -0.43
LINC00271-203ENST00000438618 GRIN2AQ12879 1464 aa12.36□□□□□ -0.43
LINC00271-203ENST00000438618 DPYSL4O14531 572 aa12.36□□□□□ -0.43
LINC00271-203ENST00000438618 CAMK2BQ13554 666 aa12.34□□□□□ -0.43
LINC00271-203ENST00000438618 ERICH3Q5RHP9 1530 aa12.33□□□□□ -0.44
LINC00271-203ENST00000438618 ADAM33Q9BZ11 813 aa12.33□□□□□ -0.44
LINC00271-203ENST00000438618 VPS9D1Q9Y2B5 631 aa12.32□□□□□ -0.44
LINC00271-203ENST00000438618 HRO43593 1189 aa12.31□□□□□ -0.44
LINC00271-203ENST00000438618 NUP160Q12769 1436 aa12.3□□□□□ -0.44
LINC00271-203ENST00000438618 TYW1BQ6NUM6 668 aa12.3□□□□□ -0.44
LINC00271-203ENST00000438618 PCDHGA10Q9Y5H3 936 aa12.3□□□□□ -0.44
LINC00271-203ENST00000438618 ADAMTS12P58397 1594 aa12.3□□□□□ -0.44
LINC00271-203ENST00000438618 IGF1RP08069 1367 aa12.3□□□□□ -0.44
LINC00271-203ENST00000438618 PHF14O94880 888 aa12.29□□□□□ -0.44
LINC00271-203ENST00000438618 FBXW7Q969H0 707 aa12.29□□□□□ -0.44
LINC00271-203ENST00000438618 KCTD12Q96CX2 325 aaKnown RBP12.29□□□□□ -0.44
LINC00271-203ENST00000438618 HCSTQ9UBK5 93 aa12.29□□□□□ -0.44
LINC00271-203ENST00000438618 KIF27Q86VH2 1401 aa12.28□□□□□ -0.44
LINC00271-203ENST00000438618 CEP170Q5SW79 1584 aa12.28□□□□□ -0.44
LINC00271-203ENST00000438618 GOLGA8CPA6NN73 597 aa12.28□□□□□ -0.44
LINC00271-203ENST00000438618 E2F4Q16254 413 aa12.27□□□□□ -0.45
LINC00271-203ENST00000438618 SLC4A5Q9BY07 1137 aa12.27□□□□□ -0.45
LINC00271-203ENST00000438618 DDX12PQ92771 950 aa12.25□□□□□ -0.45
LINC00271-203ENST00000438618 EPAS1Q99814 870 aa12.25□□□□□ -0.45
LINC00271-203ENST00000438618 ZBED2Q9BTP6 218 aa12.25□□□□□ -0.45
LINC00271-203ENST00000438618 PRG4Q92954 1404 aaPredicted RBP12.25□□□□□ -0.45
LINC00271-203ENST00000438618 ERCC6L2Q5T890 1561 aa12.25□□□□□ -0.45
LINC00271-203ENST00000438618 PPP1R3GB7ZBB8 358 aa12.23□□□□□ -0.45
LINC00271-203ENST00000438618 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
LINC00271-203ENST00000438618 RBM33Q96EV2 1170 aaKnown RBP12.23□□□□□ -0.45
LINC00271-203ENST00000438618 CARMIL1Q5VZK9 1371 aa12.22□□□□□ -0.45
LINC00271-203ENST00000438618 NBPF3Q9H094 633 aa12.22□□□□□ -0.45
LINC00271-203ENST00000438618 SPDYE16A6NNV3 312 aaPredicted RBP12.21□□□□□ -0.45
LINC00271-203ENST00000438618 NBR1Q14596 966 aa12.19□□□□□ -0.46
LINC00271-203ENST00000438618 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
LINC00271-203ENST00000438618 COL9A1P20849 921 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms