RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 POLA1P09884 1462 aaPredicted RBP8.59□□□□□ -1.03
CDC42EP3-202ENST00000422687 E2F4Q16254 413 aa8.57□□□□□ -1.04
CDC42EP3-202ENST00000422687 CHD1O14646 1710 aa8.57□□□□□ -1.04
CDC42EP3-202ENST00000422687 DSG2Q14126 1118 aa8.56□□□□□ -1.04
CDC42EP3-202ENST00000422687 NCKAP5LQ9HCH0 1330 aa8.55□□□□□ -1.04
CDC42EP3-202ENST00000422687 CLASP1Q7Z460 1538 aa8.55□□□□□ -1.04
CDC42EP3-202ENST00000422687 RAD54L2Q9Y4B4 1467 aa8.55□□□□□ -1.04
CDC42EP3-202ENST00000422687 SOGA1O94964 1423 aa8.54□□□□□ -1.04
CDC42EP3-202ENST00000422687 WDR97A6NE52 1622 aa8.54□□□□□ -1.04
CDC42EP3-202ENST00000422687 TDRD9Q8NDG6 1382 aaKnown RBP8.54□□□□□ -1.04
CDC42EP3-202ENST00000422687 PDE4AP27815 886 aa8.54□□□□□ -1.04
CDC42EP3-202ENST00000422687 MFSD10Q14728 455 aa8.54□□□□□ -1.04
CDC42EP3-202ENST00000422687 PLPP6Q8IY26 295 aa8.54□□□□□ -1.04
CDC42EP3-202ENST00000422687 TESPA1A2RU30 521 aaPredicted RBP8.53□□□□□ -1.04
CDC42EP3-202ENST00000422687 HS3ST6Q96QI5 342 aa8.53□□□□□ -1.04
CDC42EP3-202ENST00000422687 SNAPC4Q5SXM2 1469 aa8.52□□□□□ -1.05
CDC42EP3-202ENST00000422687 MAGI1Q96QZ7 1491 aaPredicted RBP8.52□□□□□ -1.05
CDC42EP3-202ENST00000422687 POTEB3A0JP26 581 aa8.52□□□□□ -1.05
CDC42EP3-202ENST00000422687 TMEM132AQ24JP5 1023 aa8.52□□□□□ -1.05
CDC42EP3-202ENST00000422687 ARSIQ5FYB1 569 aa8.52□□□□□ -1.05
CDC42EP3-202ENST00000422687 POTEBQ6S5H4 581 aa8.52□□□□□ -1.05
CDC42EP3-202ENST00000422687 PTCD2Q8WV60 388 aaKnown RBP8.52□□□□□ -1.05
CDC42EP3-202ENST00000422687 ARIH1Q9Y4X5 557 aaPredicted RBP8.52□□□□□ -1.05
CDC42EP3-202ENST00000422687 PCDHGA4Q9Y5G9 962 aa8.52□□□□□ -1.05
CDC42EP3-202ENST00000422687 FAM205CA6NFA0 338 aa8.51□□□□□ -1.05
CDC42EP3-202ENST00000422687 PPP1R15BQ5SWA1 713 aa8.51□□□□□ -1.05
CDC42EP3-202ENST00000422687 TULP1O00294 542 aaPredicted RBP8.5□□□□□ -1.05
CDC42EP3-202ENST00000422687 GRIN2BQ13224 1484 aa8.5□□□□□ -1.05
CDC42EP3-202ENST00000422687 FGD5Q6ZNL6 1462 aa8.5□□□□□ -1.05
CDC42EP3-202ENST00000422687 SYNJ1O43426 1573 aa8.49□□□□□ -1.05
CDC42EP3-202ENST00000422687 KDM4FA0A1W2PPD8 638 aa8.49□□□□□ -1.05
CDC42EP3-202ENST00000422687 CHMP7Q8WUX9 453 aaPredicted RBP8.49□□□□□ -1.05
CDC42EP3-202ENST00000422687 SYNJ2O15056 1496 aa8.49□□□□□ -1.05
CDC42EP3-202ENST00000422687 ERBB3P21860 1342 aa8.49□□□□□ -1.05
CDC42EP3-202ENST00000422687 SEMA3EO15041 775 aa8.48□□□□□ -1.05
CDC42EP3-202ENST00000422687 ZC3H15Q8WU90 426 aaKnown RBP8.48□□□□□ -1.05
CDC42EP3-202ENST00000422687 KHSRPQ92945 711 aaKnown RBP eCLIP8.48□□□□□ -1.05
CDC42EP3-202ENST00000422687 DDX27Q96GQ7 796 aaKnown RBP8.48□□□□□ -1.05
CDC42EP3-202ENST00000422687 CUX1P39880 1505 aa8.48□□□□□ -1.05
CDC42EP3-202ENST00000422687 ZNF316A6NFI3 1004 aaPredicted RBP8.47□□□□□ -1.05
CDC42EP3-202ENST00000422687 CAMK2BQ13554 666 aa8.47□□□□□ -1.05
CDC42EP3-202ENST00000422687 OXER1Q8TDS5 423 aa8.47□□□□□ -1.05
CDC42EP3-202ENST00000422687 LARP6Q9BRS8 491 aaKnown RBP8.47□□□□□ -1.05
CDC42EP3-202ENST00000422687 KRTAP3-3Q9BYR6 98 aa8.47□□□□□ -1.05
CDC42EP3-202ENST00000422687 KRTAP3-2Q9BYR7 98 aa8.47□□□□□ -1.05
CDC42EP3-202ENST00000422687 GTF3C3Q9Y5Q9 886 aa8.47□□□□□ -1.05
CDC42EP3-202ENST00000422687 NUDT7P0C024 238 aa8.46□□□□□ -1.06
CDC42EP3-202ENST00000422687 VARS2Q5ST30 1063 aaKnown RBP8.46□□□□□ -1.06
CDC42EP3-202ENST00000422687 TIMELESSQ9UNS1 1208 aa8.46□□□□□ -1.06
CDC42EP3-202ENST00000422687 GAPVD1Q14C86 1478 aa8.45□□□□□ -1.06
CDC42EP3-202ENST00000422687 ZNF687Q8N1G0 1237 aa8.44□□□□□ -1.06
CDC42EP3-202ENST00000422687 TBC1D12O60347 775 aa8.43□□□□□ -1.06
CDC42EP3-202ENST00000422687 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
CDC42EP3-202ENST00000422687 ABCA10Q8WWZ4 1543 aa8.43□□□□□ -1.06
CDC42EP3-202ENST00000422687 LHX6Q9UPM6 363 aa8.42□□□□□ -1.06
CDC42EP3-202ENST00000422687 ABCA5Q8WWZ7 1642 aa8.4□□□□□ -1.06
CDC42EP3-202ENST00000422687 PSDA5PKW4 1024 aaPredicted RBP8.4□□□□□ -1.06
CDC42EP3-202ENST00000422687 NUP160Q12769 1436 aa8.39□□□□□ -1.07
CDC42EP3-202ENST00000422687 ZMYND10O75800 440 aa8.39□□□□□ -1.07
CDC42EP3-202ENST00000422687 SMYD5Q6GMV2 418 aa8.39□□□□□ -1.07
CDC42EP3-202ENST00000422687 ERICH6Q7L0X2 663 aa8.39□□□□□ -1.07
CDC42EP3-202ENST00000422687 UPF1Q92900 1129 aaKnown RBP eCLIP8.39□□□□□ -1.07
CDC42EP3-202ENST00000422687 GRIN2AQ12879 1464 aa8.38□□□□□ -1.07
CDC42EP3-202ENST00000422687 PBRM1Q86U86 1689 aa8.38□□□□□ -1.07
CDC42EP3-202ENST00000422687 EMILIN3Q9NT22 766 aa8.38□□□□□ -1.07
CDC42EP3-202ENST00000422687 ERCC6L2Q5T890 1561 aa8.38□□□□□ -1.07
CDC42EP3-202ENST00000422687 PBX2P40425 430 aa8.36□□□□□ -1.07
CDC42EP3-202ENST00000422687 SLC24A3Q9HC58 644 aa8.36□□□□□ -1.07
CDC42EP3-202ENST00000422687 ANO8Q9HCE9 1232 aaPredicted RBP8.36□□□□□ -1.07
CDC42EP3-202ENST00000422687 CEP170Q5SW79 1584 aa8.35□□□□□ -1.07
CDC42EP3-202ENST00000422687 SHROOM2Q13796 1616 aa8.35□□□□□ -1.07
CDC42EP3-202ENST00000422687 ADAMTS12P58397 1594 aa8.35□□□□□ -1.07
CDC42EP3-202ENST00000422687 BARGINQ6ZT62 677 aa8.34□□□□□ -1.07
CDC42EP3-202ENST00000422687 FHAD1B1AJZ9 1412 aa8.34□□□□□ -1.07
CDC42EP3-202ENST00000422687 WRNQ14191 1432 aaPredicted RBP eCLIP8.34□□□□□ -1.07
CDC42EP3-202ENST00000422687 EVI5O60447 810 aa8.32□□□□□ -1.08
CDC42EP3-202ENST00000422687 MAP3K9P80192 1104 aa8.32□□□□□ -1.08
CDC42EP3-202ENST00000422687 PPP4R3BQ5MIZ7 849 aa8.32□□□□□ -1.08
CDC42EP3-202ENST00000422687 POTEEQ6S8J3 1075 aa8.32□□□□□ -1.08
CDC42EP3-202ENST00000422687 ERICH3Q5RHP9 1530 aa8.31□□□□□ -1.08
CDC42EP3-202ENST00000422687 MLLT3P42568 568 aaPredicted RBP8.31□□□□□ -1.08
CDC42EP3-202ENST00000422687 FOSBP53539 338 aa8.31□□□□□ -1.08
CDC42EP3-202ENST00000422687 NEUROD2Q15784 382 aa8.31□□□□□ -1.08
CDC42EP3-202ENST00000422687 JPH4Q96JJ6 628 aa8.31□□□□□ -1.08
CDC42EP3-202ENST00000422687 LSM11P83369 360 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDC42EP3-202ENST00000422687 PDIA6Q15084 440 aa8.3□□□□□ -1.08
CDC42EP3-202ENST00000422687 TOP2BQ02880 1626 aa8.29□□□□□ -1.08
CDC42EP3-202ENST00000422687 SPDYE16A6NNV3 312 aaPredicted RBP8.29□□□□□ -1.08
CDC42EP3-202ENST00000422687 BIVM-ERCC5R4GMW8 1640 aa8.29□□□□□ -1.08
CDC42EP3-202ENST00000422687 PRG4Q92954 1404 aaPredicted RBP8.29□□□□□ -1.08
CDC42EP3-202ENST00000422687 ARHGAP33O14559 1287 aa8.28□□□□□ -1.08
CDC42EP3-202ENST00000422687 RBM26Q5T8P6 1007 aaKnown RBP8.28□□□□□ -1.08
CDC42EP3-202ENST00000422687 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
CDC42EP3-202ENST00000422687 ABCC10Q5T3U5 1492 aa8.27□□□□□ -1.09
CDC42EP3-202ENST00000422687 DPYSL4O14531 572 aa8.27□□□□□ -1.09
CDC42EP3-202ENST00000422687 ZNF454Q8N9F8 522 aa8.27□□□□□ -1.09
CDC42EP3-202ENST00000422687 KIF13AQ9H1H9 1805 aa8.26□□□□□ -1.09
CDC42EP3-202ENST00000422687 MAPKBP1O60336 1514 aa8.26□□□□□ -1.09
CDC42EP3-202ENST00000422687 PTGER2P43116 358 aa8.26□□□□□ -1.09
CDC42EP3-202ENST00000422687 GPIHBP1Q8IV16 184 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms