RNA–Protein interactions for RNA: ENST00000412309.6

MS4A6A-201, Transcript of membrane spanning 4-domains A6A, humanhuman

TSL 2 BASIC

Gene MS4A6A, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-201ENST00000412309 ARHGAP33O14559 1287 aa14.57□□□□□ -0.08
MS4A6A-201ENST00000412309 IFT140Q96RY7 1462 aa14.57□□□□□ -0.08
MS4A6A-201ENST00000412309 PPP4R3BQ5MIZ7 849 aa14.53□□□□□ -0.08
MS4A6A-201ENST00000412309 LARP6Q9BRS8 491 aaKnown RBP14.53□□□□□ -0.08
MS4A6A-201ENST00000412309 PSEN2P49810 448 aa14.52□□□□□ -0.09
MS4A6A-201ENST00000412309 TARBP1Q13395 1621 aaKnown RBP14.51□□□□□ -0.09
MS4A6A-201ENST00000412309 POLA1P09884 1462 aaPredicted RBP14.5□□□□□ -0.09
MS4A6A-201ENST00000412309 MFSD10Q14728 455 aa14.5□□□□□ -0.09
MS4A6A-201ENST00000412309 DMRTA1Q5VZB9 504 aa14.5□□□□□ -0.09
MS4A6A-201ENST00000412309 ADGRD1Q6QNK2 874 aa14.5□□□□□ -0.09
MS4A6A-201ENST00000412309 DDX27Q96GQ7 796 aaKnown RBP14.49□□□□□ -0.09
MS4A6A-201ENST00000412309 EIF4G3O43432 1585 aaKnown RBP14.48□□□□□ -0.09
MS4A6A-201ENST00000412309 CUX1P39880 1505 aa14.48□□□□□ -0.09
MS4A6A-201ENST00000412309 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
MS4A6A-201ENST00000412309 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
MS4A6A-201ENST00000412309 ZNF608Q9ULD9 1512 aaPredicted RBP14.45□□□□□ -0.1
MS4A6A-201ENST00000412309 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
MS4A6A-201ENST00000412309 TK2O00142 265 aa14.44□□□□□ -0.1
MS4A6A-201ENST00000412309 ZNF454Q8N9F8 522 aa14.44□□□□□ -0.1
MS4A6A-201ENST00000412309 KCNK17Q96T54 332 aa14.42□□□□□ -0.1
MS4A6A-201ENST00000412309 ANO8Q9HCE9 1232 aaPredicted RBP14.42□□□□□ -0.1
MS4A6A-201ENST00000412309 HRO43593 1189 aa14.41□□□□□ -0.1
MS4A6A-201ENST00000412309 EVI5O60447 810 aa14.41□□□□□ -0.1
MS4A6A-201ENST00000412309 FOSBP53539 338 aa14.41□□□□□ -0.1
MS4A6A-201ENST00000412309 EMILIN3Q9NT22 766 aa14.4□□□□□ -0.1
MS4A6A-201ENST00000412309 BIVM-ERCC5R4GMW8 1640 aa14.4□□□□□ -0.1
MS4A6A-201ENST00000412309 TOP2BQ02880 1626 aa14.38□□□□□ -0.11
MS4A6A-201ENST00000412309 BBXQ8WY36 941 aaPredicted RBP14.38□□□□□ -0.11
MS4A6A-201ENST00000412309 BCL2L12Q9HB09 334 aa14.37□□□□□ -0.11
MS4A6A-201ENST00000412309 SOGA1O94964 1423 aa14.36□□□□□ -0.11
MS4A6A-201ENST00000412309 MAP3K9P80192 1104 aa14.36□□□□□ -0.11
MS4A6A-201ENST00000412309 RAD54L2Q9Y4B4 1467 aa14.36□□□□□ -0.11
MS4A6A-201ENST00000412309 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
MS4A6A-201ENST00000412309 JPH4Q96JJ6 628 aa14.35□□□□□ -0.11
MS4A6A-201ENST00000412309 KCNH8Q96L42 1107 aa14.35□□□□□ -0.11
MS4A6A-201ENST00000412309 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
MS4A6A-201ENST00000412309 ABCA10Q8WWZ4 1543 aa14.34□□□□□ -0.11
MS4A6A-201ENST00000412309 AQRO60306 1485 aaKnown RBP eCLIP14.32□□□□□ -0.12
MS4A6A-201ENST00000412309 AMER1Q5JTC6 1135 aaPredicted RBP14.32□□□□□ -0.12
MS4A6A-201ENST00000412309 ABCA5Q8WWZ7 1642 aa14.32□□□□□ -0.12
MS4A6A-201ENST00000412309 VPS9D1Q9Y2B5 631 aa14.31□□□□□ -0.12
MS4A6A-201ENST00000412309 PTPREP23469 700 aa14.29□□□□□ -0.12
MS4A6A-201ENST00000412309 ZDHHC16Q969W1 377 aa14.29□□□□□ -0.12
MS4A6A-201ENST00000412309 ADAM33Q9BZ11 813 aa14.29□□□□□ -0.12
MS4A6A-201ENST00000412309 MAGI1Q96QZ7 1491 aaPredicted RBP14.29□□□□□ -0.12
MS4A6A-201ENST00000412309 CHD1O14646 1710 aa14.28□□□□□ -0.12
MS4A6A-201ENST00000412309 CAMK2BQ13554 666 aa14.28□□□□□ -0.12
MS4A6A-201ENST00000412309 PBRM1Q86U86 1689 aa14.28□□□□□ -0.12
MS4A6A-201ENST00000412309 SLC4A5Q9BY07 1137 aa14.28□□□□□ -0.12
MS4A6A-201ENST00000412309 RTN4Q9NQC3 1192 aaKnown RBP14.28□□□□□ -0.12
MS4A6A-201ENST00000412309 GRIN2BQ13224 1484 aa14.27□□□□□ -0.12
MS4A6A-201ENST00000412309 HCSTQ9UBK5 93 aa14.27□□□□□ -0.13
MS4A6A-201ENST00000412309 TDRD9Q8NDG6 1382 aaKnown RBP14.26□□□□□ -0.13
MS4A6A-201ENST00000412309 SNAPC4Q5SXM2 1469 aa14.25□□□□□ -0.13
MS4A6A-201ENST00000412309 ZBED2Q9BTP6 218 aa14.25□□□□□ -0.13
MS4A6A-201ENST00000412309 KCTD12Q96CX2 325 aaKnown RBP14.24□□□□□ -0.13
MS4A6A-201ENST00000412309 STAC3Q96MF2 364 aa14.24□□□□□ -0.13
MS4A6A-201ENST00000412309 PCDHGA10Q9Y5H3 936 aa14.24□□□□□ -0.13
MS4A6A-201ENST00000412309 GAPVD1Q14C86 1478 aa14.24□□□□□ -0.13
MS4A6A-201ENST00000412309 SPRYD3Q8NCJ5 442 aa14.22□□□□□ -0.13
MS4A6A-201ENST00000412309 SYNJ2O15056 1496 aa14.21□□□□□ -0.13
MS4A6A-201ENST00000412309 BHMG1C9JSJ3 638 aaPredicted RBP14.2□□□□□ -0.14
MS4A6A-201ENST00000412309 ADAMTS12P58397 1594 aa14.19□□□□□ -0.14
MS4A6A-201ENST00000412309 DPYSL4O14531 572 aa14.19□□□□□ -0.14
MS4A6A-201ENST00000412309 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.18□□□□□ -0.14
MS4A6A-201ENST00000412309 ERICH3Q5RHP9 1530 aa14.18□□□□□ -0.14
MS4A6A-201ENST00000412309 PHF14O94880 888 aa14.17□□□□□ -0.14
MS4A6A-201ENST00000412309 CLASP1Q7Z460 1538 aa14.16□□□□□ -0.14
MS4A6A-201ENST00000412309 TYW1BQ6NUM6 668 aa14.15□□□□□ -0.14
MS4A6A-201ENST00000412309 PLA2G2EQ9NZK7 142 aa14.15□□□□□ -0.14
MS4A6A-201ENST00000412309 PPP1R3GB7ZBB8 358 aa14.13□□□□□ -0.15
MS4A6A-201ENST00000412309 COL9A1P20849 921 aa14.13□□□□□ -0.15
MS4A6A-201ENST00000412309 FBXW7Q969H0 707 aa14.13□□□□□ -0.15
MS4A6A-201ENST00000412309 ARHGEF11O15085 1522 aa14.13□□□□□ -0.15
MS4A6A-201ENST00000412309 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
MS4A6A-201ENST00000412309 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
MS4A6A-201ENST00000412309 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
MS4A6A-201ENST00000412309 GRIN2AQ12879 1464 aa14.11□□□□□ -0.15
MS4A6A-201ENST00000412309 PAXIP1Q6ZW49 1069 aaPredicted RBP14.1□□□□□ -0.15
MS4A6A-201ENST00000412309 MRPL50Q8N5N7 158 aaKnown RBP14.1□□□□□ -0.15
MS4A6A-201ENST00000412309 CFAP44Q96MT7 982 aa14.1□□□□□ -0.15
MS4A6A-201ENST00000412309 FHAD1B1AJZ9 1412 aa14.09□□□□□ -0.15
MS4A6A-201ENST00000412309 PROX2Q3B8N5 592 aa14.09□□□□□ -0.15
MS4A6A-201ENST00000412309 EPAS1Q99814 870 aa14.09□□□□□ -0.15
MS4A6A-201ENST00000412309 PTPN5P54829 565 aa14.08□□□□□ -0.16
MS4A6A-201ENST00000412309 NBPF3Q9H094 633 aa14.07□□□□□ -0.16
MS4A6A-201ENST00000412309 NUP160Q12769 1436 aa14.07□□□□□ -0.16
MS4A6A-201ENST00000412309 THSD4Q6ZMP0 1018 aa14.06□□□□□ -0.16
MS4A6A-201ENST00000412309 CHMP7Q8WUX9 453 aaPredicted RBP14.06□□□□□ -0.16
MS4A6A-201ENST00000412309 CUL7Q14999 1698 aa14.06□□□□□ -0.16
MS4A6A-201ENST00000412309 GOLGA8CPA6NN73 597 aa14.05□□□□□ -0.16
MS4A6A-201ENST00000412309 C6orf132Q5T0Z8 1188 aa14.05□□□□□ -0.16
MS4A6A-201ENST00000412309 DDX12PQ92771 950 aa14.05□□□□□ -0.16
MS4A6A-201ENST00000412309 RABGEF1Q9UJ41 708 aa14.05□□□□□ -0.16
MS4A6A-201ENST00000412309 KIF27Q86VH2 1401 aa14.05□□□□□ -0.16
MS4A6A-201ENST00000412309 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
MS4A6A-201ENST00000412309 WNT2BQ93097 391 aa14.04□□□□□ -0.16
MS4A6A-201ENST00000412309 PDIA6Q15084 440 aa14.03□□□□□ -0.16
MS4A6A-201ENST00000412309 RBM33Q96EV2 1170 aaKnown RBP14.01□□□□□ -0.17
MS4A6A-201ENST00000412309 SHROOM2Q13796 1616 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms