RNA–Protein interactions for RNA: ENST00000411337.1

RN7SKP53-201, Transcript of RNA, 7SK small nuclear pseudogene 53, humanhuman

BASIC

Gene RN7SKP53, Length 315 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP53-201ENST00000411337 FOXK1P85037 733 aa5.91□□□□□ -1.46
RN7SKP53-201ENST00000411337 POTEGQ6S5H5 508 aa5.91□□□□□ -1.46
RN7SKP53-201ENST00000411337 ZNF710Q8N1W2 664 aa5.91□□□□□ -1.46
RN7SKP53-201ENST00000411337 KIF21BO75037 1637 aa5.9□□□□□ -1.46
RN7SKP53-201ENST00000411337 UBTFP17480 764 aaKnown RBP5.9□□□□□ -1.46
RN7SKP53-201ENST00000411337 NPM2Q86SE8 214 aaKnown RBP5.9□□□□□ -1.46
RN7SKP53-201ENST00000411337 NCKAP5LQ9HCH0 1330 aa5.9□□□□□ -1.47
RN7SKP53-201ENST00000411337 KIF27Q86VH2 1401 aa5.9□□□□□ -1.47
RN7SKP53-201ENST00000411337 EIF4G3O43432 1585 aaKnown RBP5.89□□□□□ -1.47
RN7SKP53-201ENST00000411337 SLC34A2O95436 690 aa5.89□□□□□ -1.47
RN7SKP53-201ENST00000411337 HOXB1P14653 301 aaPredicted RBP5.89□□□□□ -1.47
RN7SKP53-201ENST00000411337 PDE4AP27815 886 aa5.89□□□□□ -1.47
RN7SKP53-201ENST00000411337 DSG2Q14126 1118 aa5.89□□□□□ -1.47
RN7SKP53-201ENST00000411337 ZNF608Q9ULD9 1512 aaPredicted RBP5.89□□□□□ -1.47
RN7SKP53-201ENST00000411337 CUL7Q14999 1698 aa5.88□□□□□ -1.47
RN7SKP53-201ENST00000411337 ERICH3Q5RHP9 1530 aa5.88□□□□□ -1.47
RN7SKP53-201ENST00000411337 GPR153Q6NV75 609 aa5.87□□□□□ -1.47
RN7SKP53-201ENST00000411337 CADPS2Q86UW7 1296 aa5.87□□□□□ -1.47
RN7SKP53-201ENST00000411337 PLPP6Q8IY26 295 aa5.87□□□□□ -1.47
RN7SKP53-201ENST00000411337 MARVELD3Q96A59 401 aa5.87□□□□□ -1.47
RN7SKP53-201ENST00000411337 PRXQ9BXM0 1461 aa5.87□□□□□ -1.47
RN7SKP53-201ENST00000411337 ADAMTS12P58397 1594 aa5.86□□□□□ -1.47
RN7SKP53-201ENST00000411337 GAPVD1Q14C86 1478 aa5.86□□□□□ -1.47
RN7SKP53-201ENST00000411337 EMP3P54852 163 aa5.86□□□□□ -1.47
RN7SKP53-201ENST00000411337 MFSD10Q14728 455 aa5.86□□□□□ -1.47
RN7SKP53-201ENST00000411337 PPP1R15BQ5SWA1 713 aa5.86□□□□□ -1.47
RN7SKP53-201ENST00000411337 IGF1RP08069 1367 aa5.85□□□□□ -1.47
RN7SKP53-201ENST00000411337 TDRD9Q8NDG6 1382 aaKnown RBP5.85□□□□□ -1.47
RN7SKP53-201ENST00000411337 BRPF1P55201 1214 aaPredicted RBP5.85□□□□□ -1.47
RN7SKP53-201ENST00000411337 ARSIQ5FYB1 569 aa5.85□□□□□ -1.47
RN7SKP53-201ENST00000411337 FAM9AQ8IZU1 332 aaPredicted RBP5.85□□□□□ -1.47
RN7SKP53-201ENST00000411337 DDX27Q96GQ7 796 aaKnown RBP5.85□□□□□ -1.47
RN7SKP53-201ENST00000411337 LARP6Q9BRS8 491 aaKnown RBP5.85□□□□□ -1.47
RN7SKP53-201ENST00000411337 AQRO60306 1485 aaKnown RBP eCLIP5.84□□□□□ -1.47
RN7SKP53-201ENST00000411337 GOLGA3Q08378 1498 aa5.84□□□□□ -1.47
RN7SKP53-201ENST00000411337 PTCD2Q8WV60 388 aaKnown RBP5.84□□□□□ -1.47
RN7SKP53-201ENST00000411337 PCDH10Q9P2E7 1040 aa5.84□□□□□ -1.47
RN7SKP53-201ENST00000411337 PCDHGA4Q9Y5G9 962 aa5.84□□□□□ -1.47
RN7SKP53-201ENST00000411337 GRIN2BQ13224 1484 aa5.83□□□□□ -1.48
RN7SKP53-201ENST00000411337 RAPGEF2Q9Y4G8 1499 aa5.83□□□□□ -1.48
RN7SKP53-201ENST00000411337 CTTNBP2Q8WZ74 1663 aa5.82□□□□□ -1.48
RN7SKP53-201ENST00000411337 FAM205CA6NFA0 338 aa5.82□□□□□ -1.48
RN7SKP53-201ENST00000411337 KHSRPQ92945 711 aaKnown RBP eCLIP5.82□□□□□ -1.48
RN7SKP53-201ENST00000411337 SNAPC4Q5SXM2 1469 aa5.82□□□□□ -1.48
RN7SKP53-201ENST00000411337 MAGI1Q96QZ7 1491 aaPredicted RBP5.82□□□□□ -1.48
RN7SKP53-201ENST00000411337 CARMIL1Q5VZK9 1371 aa5.81□□□□□ -1.48
RN7SKP53-201ENST00000411337 ERBB3P21860 1342 aa5.81□□□□□ -1.48
RN7SKP53-201ENST00000411337 LOC105371045A0A1W2PR82 267 aa5.81□□□□□ -1.48
RN7SKP53-201ENST00000411337 TBC1D12O60347 775 aa5.81□□□□□ -1.48
RN7SKP53-201ENST00000411337 CDAN1Q8IWY9 1227 aa5.81□□□□□ -1.48
RN7SKP53-201ENST00000411337 OXER1Q8TDS5 423 aa5.81□□□□□ -1.48
RN7SKP53-201ENST00000411337 HS3ST6Q96QI5 342 aa5.81□□□□□ -1.48
RN7SKP53-201ENST00000411337 FHAD1B1AJZ9 1412 aa5.81□□□□□ -1.48
RN7SKP53-201ENST00000411337 CHD1O14646 1710 aa5.8□□□□□ -1.48
RN7SKP53-201ENST00000411337 KDM4FA0A1W2PPD8 638 aa5.8□□□□□ -1.48
RN7SKP53-201ENST00000411337 POTEB3A0JP26 581 aa5.8□□□□□ -1.48
RN7SKP53-201ENST00000411337 NUDT7P0C024 238 aa5.8□□□□□ -1.48
RN7SKP53-201ENST00000411337 POTEBQ6S5H4 581 aa5.8□□□□□ -1.48
RN7SKP53-201ENST00000411337 TNIKQ9UKE5 1360 aa5.8□□□□□ -1.48
RN7SKP53-201ENST00000411337 ZNF316A6NFI3 1004 aaPredicted RBP5.79□□□□□ -1.48
RN7SKP53-201ENST00000411337 SYNJ2O15056 1496 aa5.78□□□□□ -1.48
RN7SKP53-201ENST00000411337 CAMK2BQ13554 666 aa5.78□□□□□ -1.48
RN7SKP53-201ENST00000411337 VARS2Q5ST30 1063 aaKnown RBP5.78□□□□□ -1.48
RN7SKP53-201ENST00000411337 UPF1Q92900 1129 aaKnown RBP eCLIP5.78□□□□□ -1.48
RN7SKP53-201ENST00000411337 GRIN2AQ12879 1464 aa5.77□□□□□ -1.49
RN7SKP53-201ENST00000411337 CEP170Q5SW79 1584 aa5.76□□□□□ -1.49
RN7SKP53-201ENST00000411337 CEP162Q5TB80 1403 aa5.76□□□□□ -1.49
RN7SKP53-201ENST00000411337 PSDA5PKW4 1024 aaPredicted RBP5.76□□□□□ -1.49
RN7SKP53-201ENST00000411337 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.76□□□□□ -1.49
RN7SKP53-201ENST00000411337 ZNF687Q8N1G0 1237 aa5.76□□□□□ -1.49
RN7SKP53-201ENST00000411337 EMILIN3Q9NT22 766 aa5.76□□□□□ -1.49
RN7SKP53-201ENST00000411337 LHX6Q9UPM6 363 aa5.76□□□□□ -1.49
RN7SKP53-201ENST00000411337 NUP160Q12769 1436 aa5.75□□□□□ -1.49
RN7SKP53-201ENST00000411337 MAP3K9P80192 1104 aa5.75□□□□□ -1.49
RN7SKP53-201ENST00000411337 WDR70Q9NW82 654 aa5.75□□□□□ -1.49
RN7SKP53-201ENST00000411337 IQGAP2Q13576 1575 aa5.75□□□□□ -1.49
RN7SKP53-201ENST00000411337 SAMD9Q5K651 1589 aa5.75□□□□□ -1.49
RN7SKP53-201ENST00000411337 EVI5O60447 810 aa5.74□□□□□ -1.49
RN7SKP53-201ENST00000411337 E2F4Q16254 413 aa5.73□□□□□ -1.49
RN7SKP53-201ENST00000411337 KRTAP3-3Q9BYR6 98 aa5.73□□□□□ -1.49
RN7SKP53-201ENST00000411337 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
RN7SKP53-201ENST00000411337 ANO8Q9HCE9 1232 aaPredicted RBP5.73□□□□□ -1.49
RN7SKP53-201ENST00000411337 EFCAB5A4FU69 1503 aa5.73□□□□□ -1.49
RN7SKP53-201ENST00000411337 KIAA0586Q9BVV6 1533 aa5.73□□□□□ -1.49
RN7SKP53-201ENST00000411337 CLIP1P30622 1438 aa5.73□□□□□ -1.49
RN7SKP53-201ENST00000411337 ARAP1Q96P48 1450 aa5.72□□□□□ -1.49
RN7SKP53-201ENST00000411337 ARHGAP35Q9NRY4 1499 aa5.72□□□□□ -1.49
RN7SKP53-201ENST00000411337 LMOD2Q6P5Q4 547 aa5.72□□□□□ -1.49
RN7SKP53-201ENST00000411337 SHROOM2Q13796 1616 aa5.72□□□□□ -1.49
RN7SKP53-201ENST00000411337 CLASP1Q7Z460 1538 aa5.72□□□□□ -1.49
RN7SKP53-201ENST00000411337 UGGT2Q9NYU1 1516 aa5.72□□□□□ -1.49
RN7SKP53-201ENST00000411337 DPYSL4O14531 572 aa5.71□□□□□ -1.5
RN7SKP53-201ENST00000411337 PBX2P40425 430 aa5.71□□□□□ -1.5
RN7SKP53-201ENST00000411337 PPP4R3BQ5MIZ7 849 aa5.71□□□□□ -1.5
RN7SKP53-201ENST00000411337 ZMYND15Q9H091 742 aa5.71□□□□□ -1.5
RN7SKP53-201ENST00000411337 ARIH1Q9Y4X5 557 aaPredicted RBP5.71□□□□□ -1.5
RN7SKP53-201ENST00000411337 KIAA0556O60303 1618 aa5.7□□□□□ -1.5
RN7SKP53-201ENST00000411337 CHMP7Q8WUX9 453 aaPredicted RBP5.7□□□□□ -1.5
RN7SKP53-201ENST00000411337 DISP1Q96F81 1524 aa5.69□□□□□ -1.5
RN7SKP53-201ENST00000411337 FOSBP53539 338 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms