RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
SFR1-201ENST00000369727 TDRD9Q8NDG6 1382 aaKnown RBP13.15□□□□□ -0.3
SFR1-201ENST00000369727 LARP6Q9BRS8 491 aaKnown RBP13.13□□□□□ -0.31
SFR1-201ENST00000369727 KDM4FA0A1W2PPD8 638 aa13.13□□□□□ -0.31
SFR1-201ENST00000369727 CADPS2Q86UW7 1296 aa13.13□□□□□ -0.31
SFR1-201ENST00000369727 TBC1D12O60347 775 aa13.12□□□□□ -0.31
SFR1-201ENST00000369727 UPF1Q92900 1129 aaKnown RBP eCLIP13.12□□□□□ -0.31
SFR1-201ENST00000369727 CHD1O14646 1710 aa13.11□□□□□ -0.31
SFR1-201ENST00000369727 BIVM-ERCC5R4GMW8 1640 aa13.11□□□□□ -0.31
SFR1-201ENST00000369727 WRNQ14191 1432 aaPredicted RBP eCLIP13.11□□□□□ -0.31
SFR1-201ENST00000369727 TOP2BQ02880 1626 aa13.1□□□□□ -0.31
SFR1-201ENST00000369727 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
SFR1-201ENST00000369727 GRIN2BQ13224 1484 aa13.09□□□□□ -0.31
SFR1-201ENST00000369727 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
SFR1-201ENST00000369727 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
SFR1-201ENST00000369727 MAGI1Q96QZ7 1491 aaPredicted RBP13.09□□□□□ -0.31
SFR1-201ENST00000369727 SNAPC4Q5SXM2 1469 aa13.08□□□□□ -0.32
SFR1-201ENST00000369727 MFSD10Q14728 455 aa13.07□□□□□ -0.32
SFR1-201ENST00000369727 GAPVD1Q14C86 1478 aa13.07□□□□□ -0.32
SFR1-201ENST00000369727 SYNJ1O43426 1573 aa13.07□□□□□ -0.32
SFR1-201ENST00000369727 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
SFR1-201ENST00000369727 PBRM1Q86U86 1689 aa13.06□□□□□ -0.32
SFR1-201ENST00000369727 ABCA5Q8WWZ7 1642 aa13.05□□□□□ -0.32
SFR1-201ENST00000369727 SPRYD3Q8NCJ5 442 aa13.05□□□□□ -0.32
SFR1-201ENST00000369727 RIMBP3CA6NJZ7 1639 aa13.04□□□□□ -0.32
SFR1-201ENST00000369727 RIMBP3BA6NNM3 1639 aa13.04□□□□□ -0.32
SFR1-201ENST00000369727 RIMBP3Q9UFD9 1639 aa13.04□□□□□ -0.32
SFR1-201ENST00000369727 PSDA5PKW4 1024 aaPredicted RBP13.04□□□□□ -0.32
SFR1-201ENST00000369727 POTEEQ6S8J3 1075 aa13.03□□□□□ -0.32
SFR1-201ENST00000369727 SYNJ2O15056 1496 aa13.02□□□□□ -0.32
SFR1-201ENST00000369727 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
SFR1-201ENST00000369727 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.33
SFR1-201ENST00000369727 AXIN2Q9Y2T1 843 aa13.02□□□□□ -0.33
SFR1-201ENST00000369727 ARHGEF11O15085 1522 aa13.02□□□□□ -0.33
SFR1-201ENST00000369727 PBX2P40425 430 aa13.01□□□□□ -0.33
SFR1-201ENST00000369727 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
SFR1-201ENST00000369727 PAXIP1Q6ZW49 1069 aaPredicted RBP12.98□□□□□ -0.33
SFR1-201ENST00000369727 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
SFR1-201ENST00000369727 PPP4R3BQ5MIZ7 849 aa12.97□□□□□ -0.33
SFR1-201ENST00000369727 CLASP1Q7Z460 1538 aa12.97□□□□□ -0.33
SFR1-201ENST00000369727 EMILIN3Q9NT22 766 aa12.96□□□□□ -0.33
SFR1-201ENST00000369727 ARHGAP33O14559 1287 aa12.95□□□□□ -0.34
SFR1-201ENST00000369727 ERICH3Q5RHP9 1530 aa12.94□□□□□ -0.34
SFR1-201ENST00000369727 EVI5O60447 810 aa12.94□□□□□ -0.34
SFR1-201ENST00000369727 MAP3K9P80192 1104 aa12.94□□□□□ -0.34
SFR1-201ENST00000369727 ADAMTS12P58397 1594 aa12.94□□□□□ -0.34
SFR1-201ENST00000369727 FHAD1B1AJZ9 1412 aa12.92□□□□□ -0.34
SFR1-201ENST00000369727 ZNF454Q8N9F8 522 aa12.92□□□□□ -0.34
SFR1-201ENST00000369727 MYT1LQ9UL68 1186 aa12.92□□□□□ -0.34
SFR1-201ENST00000369727 GRIN2AQ12879 1464 aa12.92□□□□□ -0.34
SFR1-201ENST00000369727 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
SFR1-201ENST00000369727 PSEN2P49810 448 aa12.9□□□□□ -0.34
SFR1-201ENST00000369727 RNF166Q96A37 237 aaPredicted RBP12.9□□□□□ -0.34
SFR1-201ENST00000369727 ARAP1Q96P48 1450 aa12.89□□□□□ -0.35
SFR1-201ENST00000369727 PTGER2P43116 358 aa12.88□□□□□ -0.35
SFR1-201ENST00000369727 CAMK2BQ13554 666 aa12.88□□□□□ -0.35
SFR1-201ENST00000369727 DMRTA1Q5VZB9 504 aa12.88□□□□□ -0.35
SFR1-201ENST00000369727 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
SFR1-201ENST00000369727 FOSBP53539 338 aa12.88□□□□□ -0.35
SFR1-201ENST00000369727 NUP160Q12769 1436 aa12.87□□□□□ -0.35
SFR1-201ENST00000369727 KCNK17Q96T54 332 aa12.86□□□□□ -0.35
SFR1-201ENST00000369727 CEP170Q5SW79 1584 aa12.85□□□□□ -0.35
SFR1-201ENST00000369727 KIF27Q86VH2 1401 aa12.85□□□□□ -0.35
SFR1-201ENST00000369727 ADGRD1Q6QNK2 874 aa12.85□□□□□ -0.35
SFR1-201ENST00000369727 JPH4Q96JJ6 628 aa12.84□□□□□ -0.35
SFR1-201ENST00000369727 DPYSL4O14531 572 aa12.82□□□□□ -0.36
SFR1-201ENST00000369727 KCNH8Q96L42 1107 aa12.82□□□□□ -0.36
SFR1-201ENST00000369727 BCL2L12Q9HB09 334 aa12.82□□□□□ -0.36
SFR1-201ENST00000369727 IGF1RP08069 1367 aa12.81□□□□□ -0.36
SFR1-201ENST00000369727 CUL7Q14999 1698 aa12.8□□□□□ -0.36
SFR1-201ENST00000369727 TK2O00142 265 aa12.8□□□□□ -0.36
SFR1-201ENST00000369727 SHROOM2Q13796 1616 aa12.8□□□□□ -0.36
SFR1-201ENST00000369727 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
SFR1-201ENST00000369727 ADAM33Q9BZ11 813 aa12.79□□□□□ -0.36
SFR1-201ENST00000369727 PTPREP23469 700 aa12.77□□□□□ -0.37
SFR1-201ENST00000369727 PCDHGA10Q9Y5H3 936 aa12.77□□□□□ -0.37
SFR1-201ENST00000369727 ERCC6L2Q5T890 1561 aa12.76□□□□□ -0.37
SFR1-201ENST00000369727 HRO43593 1189 aa12.75□□□□□ -0.37
SFR1-201ENST00000369727 WDR70Q9NW82 654 aa12.75□□□□□ -0.37
SFR1-201ENST00000369727 RUSC2Q8N2Y8 1516 aa12.75□□□□□ -0.37
SFR1-201ENST00000369727 CARMIL1Q5VZK9 1371 aa12.74□□□□□ -0.37
SFR1-201ENST00000369727 PHF14O94880 888 aa12.72□□□□□ -0.37
SFR1-201ENST00000369727 E2F4Q16254 413 aa12.72□□□□□ -0.37
SFR1-201ENST00000369727 VPS9D1Q9Y2B5 631 aa12.72□□□□□ -0.37
SFR1-201ENST00000369727 PRG4Q92954 1404 aaPredicted RBP12.72□□□□□ -0.37
SFR1-201ENST00000369727 KIAA0586Q9BVV6 1533 aa12.72□□□□□ -0.37
SFR1-201ENST00000369727 TYW1BQ6NUM6 668 aa12.71□□□□□ -0.38
SFR1-201ENST00000369727 TSHZ2Q9NRE2 1034 aa12.7□□□□□ -0.38
SFR1-201ENST00000369727 FBXW7Q969H0 707 aa12.69□□□□□ -0.38
SFR1-201ENST00000369727 ZBED2Q9BTP6 218 aa12.69□□□□□ -0.38
SFR1-201ENST00000369727 SLC4A5Q9BY07 1137 aa12.69□□□□□ -0.38
SFR1-201ENST00000369727 DDX12PQ92771 950 aa12.68□□□□□ -0.38
SFR1-201ENST00000369727 STAC3Q96MF2 364 aa12.68□□□□□ -0.38
SFR1-201ENST00000369727 PDIA6Q15084 440 aa12.67□□□□□ -0.38
SFR1-201ENST00000369727 EPAS1Q99814 870 aa12.66□□□□□ -0.38
SFR1-201ENST00000369727 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.39
SFR1-201ENST00000369727 SPDYE16A6NNV3 312 aaPredicted RBP12.63□□□□□ -0.39
SFR1-201ENST00000369727 PPP1R3GB7ZBB8 358 aa12.63□□□□□ -0.39
SFR1-201ENST00000369727 COL9A1P20849 921 aa12.63□□□□□ -0.39
SFR1-201ENST00000369727 ARIH1Q9Y4X5 557 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms