RNA–Protein interactions for RNA: ENST00000346279.3

XAGE3-201, Transcript of X antigen family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XAGE3, Length 497 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XAGE3-201ENST00000346279 CHD1O14646 1710 aa11.76□□□□□ -0.53
XAGE3-201ENST00000346279 STK25O00506 426 aa11.75□□□□□ -0.53
XAGE3-201ENST00000346279 TMC2Q8TDI7 906 aa11.75□□□□□ -0.53
XAGE3-201ENST00000346279 SNAPC4Q5SXM2 1469 aa11.74□□□□□ -0.53
XAGE3-201ENST00000346279 GAPVD1Q14C86 1478 aa11.73□□□□□ -0.53
XAGE3-201ENST00000346279 KCTD12Q96CX2 325 aaKnown RBP11.73□□□□□ -0.53
XAGE3-201ENST00000346279 ABCA5Q8WWZ7 1642 aa11.72□□□□□ -0.53
XAGE3-201ENST00000346279 GRIN2BQ13224 1484 aa11.72□□□□□ -0.53
XAGE3-201ENST00000346279 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
XAGE3-201ENST00000346279 DMRTA1Q5VZB9 504 aa11.7□□□□□ -0.54
XAGE3-201ENST00000346279 MAGI1Q96QZ7 1491 aaPredicted RBP11.7□□□□□ -0.54
XAGE3-201ENST00000346279 PBRM1Q86U86 1689 aa11.69□□□□□ -0.54
XAGE3-201ENST00000346279 RIMBP3CA6NJZ7 1639 aa11.68□□□□□ -0.54
XAGE3-201ENST00000346279 RIMBP3BA6NNM3 1639 aa11.68□□□□□ -0.54
XAGE3-201ENST00000346279 RIMBP3Q9UFD9 1639 aa11.68□□□□□ -0.54
XAGE3-201ENST00000346279 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
XAGE3-201ENST00000346279 IFFO2Q5TF58 517 aa11.67□□□□□ -0.54
XAGE3-201ENST00000346279 ARHGEF11O15085 1522 aa11.66□□□□□ -0.54
XAGE3-201ENST00000346279 SYNJ2O15056 1496 aa11.66□□□□□ -0.54
XAGE3-201ENST00000346279 PSEN2P49810 448 aa11.65□□□□□ -0.54
XAGE3-201ENST00000346279 CLASP1Q7Z460 1538 aa11.65□□□□□ -0.55
XAGE3-201ENST00000346279 ECM2O94769 699 aaPredicted RBP11.63□□□□□ -0.55
XAGE3-201ENST00000346279 STAC3Q96MF2 364 aa11.62□□□□□ -0.55
XAGE3-201ENST00000346279 A0A0G2JS52 829 aa11.61□□□□□ -0.55
XAGE3-201ENST00000346279 KDM4FA0A1W2PPD8 638 aa11.6□□□□□ -0.55
XAGE3-201ENST00000346279 PTPN5P54829 565 aa11.6□□□□□ -0.55
XAGE3-201ENST00000346279 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
XAGE3-201ENST00000346279 ADAMTS12P58397 1594 aa11.59□□□□□ -0.55
XAGE3-201ENST00000346279 GRIN2AQ12879 1464 aa11.59□□□□□ -0.55
XAGE3-201ENST00000346279 IGF1RP08069 1367 aa11.59□□□□□ -0.55
XAGE3-201ENST00000346279 CYB5RLQ6IPT4 315 aa11.59□□□□□ -0.55
XAGE3-201ENST00000346279 ARAP1Q96P48 1450 aa11.58□□□□□ -0.56
XAGE3-201ENST00000346279 FHAD1B1AJZ9 1412 aa11.58□□□□□ -0.56
XAGE3-201ENST00000346279 PTCD2Q8WV60 388 aaKnown RBP11.57□□□□□ -0.56
XAGE3-201ENST00000346279 NUP160Q12769 1436 aa11.57□□□□□ -0.56
XAGE3-201ENST00000346279 CEP170Q5SW79 1584 aa11.56□□□□□ -0.56
XAGE3-201ENST00000346279 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
XAGE3-201ENST00000346279 TBC1D12O60347 775 aa11.54□□□□□ -0.56
XAGE3-201ENST00000346279 PPP1R37O75864 691 aa11.54□□□□□ -0.56
XAGE3-201ENST00000346279 ERCC6L2Q5T890 1561 aa11.54□□□□□ -0.56
XAGE3-201ENST00000346279 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
XAGE3-201ENST00000346279 KIF27Q86VH2 1401 aa11.52□□□□□ -0.57
XAGE3-201ENST00000346279 RUSC2Q8N2Y8 1516 aa11.51□□□□□ -0.57
XAGE3-201ENST00000346279 RGL2O15211 777 aa11.5□□□□□ -0.57
XAGE3-201ENST00000346279 FOXK1P85037 733 aa11.5□□□□□ -0.57
XAGE3-201ENST00000346279 PLPP6Q8IY26 295 aa11.5□□□□□ -0.57
XAGE3-201ENST00000346279 VPS9D1Q9Y2B5 631 aa11.49□□□□□ -0.57
XAGE3-201ENST00000346279 SHROOM2Q13796 1616 aa11.49□□□□□ -0.57
XAGE3-201ENST00000346279 Q6ZNB5 142 aa11.48□□□□□ -0.57
XAGE3-201ENST00000346279 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
XAGE3-201ENST00000346279 THSD4Q6ZMP0 1018 aa11.47□□□□□ -0.57
XAGE3-201ENST00000346279 KCNK17Q96T54 332 aa11.47□□□□□ -0.57
XAGE3-201ENST00000346279 CARMIL1Q5VZK9 1371 aa11.46□□□□□ -0.57
XAGE3-201ENST00000346279 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.57
XAGE3-201ENST00000346279 CUL7Q14999 1698 aa11.43□□□□□ -0.58
XAGE3-201ENST00000346279 PKD2Q13563 968 aa11.43□□□□□ -0.58
XAGE3-201ENST00000346279 PRG4Q92954 1404 aaPredicted RBP11.43□□□□□ -0.58
XAGE3-201ENST00000346279 KIAA0586Q9BVV6 1533 aa11.41□□□□□ -0.58
XAGE3-201ENST00000346279 DSG2Q14126 1118 aa11.41□□□□□ -0.58
XAGE3-201ENST00000346279 SLC4A5Q9BY07 1137 aa11.39□□□□□ -0.59
XAGE3-201ENST00000346279 BHMG1C9JSJ3 638 aaPredicted RBP11.38□□□□□ -0.59
XAGE3-201ENST00000346279 WNT2BQ93097 391 aa11.36□□□□□ -0.59
XAGE3-201ENST00000346279 GOLGA8CPA6NN73 597 aa11.35□□□□□ -0.59
XAGE3-201ENST00000346279 ZNF454Q8N9F8 522 aa11.35□□□□□ -0.59
XAGE3-201ENST00000346279 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
XAGE3-201ENST00000346279 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
XAGE3-201ENST00000346279 BCL2L12Q9HB09 334 aa11.33□□□□□ -0.6
XAGE3-201ENST00000346279 OXER1Q8TDS5 423 aa11.32□□□□□ -0.6
XAGE3-201ENST00000346279 UPF1Q92900 1129 aaKnown RBP eCLIP11.32□□□□□ -0.6
XAGE3-201ENST00000346279 LCE2BO14633 110 aa11.3□□□□□ -0.6
XAGE3-201ENST00000346279 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
XAGE3-201ENST00000346279 PTPREP23469 700 aa11.3□□□□□ -0.6
XAGE3-201ENST00000346279 MRPL50Q8N5N7 158 aaKnown RBP11.3□□□□□ -0.6
XAGE3-201ENST00000346279 DISP1Q96F81 1524 aa11.3□□□□□ -0.6
XAGE3-201ENST00000346279 IQGAP2Q13576 1575 aa11.29□□□□□ -0.6
XAGE3-201ENST00000346279 HS6ST3Q8IZP7 471 aa11.29□□□□□ -0.6
XAGE3-201ENST00000346279 ADCY10Q96PN6 1610 aa11.28□□□□□ -0.6
XAGE3-201ENST00000346279 UGGT2Q9NYU1 1516 aa11.27□□□□□ -0.61
XAGE3-201ENST00000346279 PTPRGP23470 1445 aa11.26□□□□□ -0.61
XAGE3-201ENST00000346279 FOSBP53539 338 aa11.26□□□□□ -0.61
XAGE3-201ENST00000346279 ZBED2Q9BTP6 218 aa11.26□□□□□ -0.61
XAGE3-201ENST00000346279 LAPTM4AQ15012 233 aa11.25□□□□□ -0.61
XAGE3-201ENST00000346279 TNIKQ9UKE5 1360 aa11.25□□□□□ -0.61
XAGE3-201ENST00000346279 TTBK1Q5TCY1 1321 aaPredicted RBP11.24□□□□□ -0.61
XAGE3-201ENST00000346279 TRAF7Q6Q0C0 670 aa11.23□□□□□ -0.61
XAGE3-201ENST00000346279 FAM9AQ8IZU1 332 aaPredicted RBP11.23□□□□□ -0.61
XAGE3-201ENST00000346279 NBPF3Q9H094 633 aa11.23□□□□□ -0.61
XAGE3-201ENST00000346279 CARMIL2Q6F5E8 1435 aa11.23□□□□□ -0.61
XAGE3-201ENST00000346279 PPP1R15BQ5SWA1 713 aa11.22□□□□□ -0.61
XAGE3-201ENST00000346279 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
XAGE3-201ENST00000346279 KIF13AQ9H1H9 1805 aa11.22□□□□□ -0.61
XAGE3-201ENST00000346279 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
XAGE3-201ENST00000346279 KIAA0556O60303 1618 aa11.2□□□□□ -0.62
XAGE3-201ENST00000346279 CHGAP10645 457 aaKnown RBP11.2□□□□□ -0.62
XAGE3-201ENST00000346279 ZDHHC16Q969W1 377 aa11.2□□□□□ -0.62
XAGE3-201ENST00000346279 CRISPLD2Q9H0B8 497 aa11.2□□□□□ -0.62
XAGE3-201ENST00000346279 ANO8Q9HCE9 1232 aaPredicted RBP11.2□□□□□ -0.62
XAGE3-201ENST00000346279 MAPKBP1O60336 1514 aa11.19□□□□□ -0.62
XAGE3-201ENST00000346279 EEA1Q15075 1411 aa11.19□□□□□ -0.62
XAGE3-201ENST00000346279 UHRF1BP1LA0JNW5 1464 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms