RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 ARAP1Q96P48 1450 aa10.5□□□□□ -0.73
CAST-204ENST00000341926 IRX5P78411 483 aaPredicted RBP10.49□□□□□ -0.73
CAST-204ENST00000341926 OS9Q13438 667 aaPredicted RBP10.49□□□□□ -0.73
CAST-204ENST00000341926 MAFGO15525 162 aa10.49□□□□□ -0.73
CAST-204ENST00000341926 CERS3Q8IU89 383 aa10.49□□□□□ -0.73
CAST-204ENST00000341926 ANAPC15P60006 121 aa10.48□□□□□ -0.73
CAST-204ENST00000341926 GPATCH11Q8N954 259 aa10.48□□□□□ -0.73
CAST-204ENST00000341926 HSP90AB3PQ58FF7 597 aa10.48□□□□□ -0.73
CAST-204ENST00000341926 NBPF11Q86T75 865 aa10.48□□□□□ -0.73
CAST-204ENST00000341926 URB2Q14146 1524 aaKnown RBP10.47□□□□□ -0.73
CAST-204ENST00000341926 RSF1Q96T23 1441 aaPredicted RBP10.47□□□□□ -0.73
CAST-204ENST00000341926 MROH2BQ7Z745 1585 aa10.47□□□□□ -0.73
CAST-204ENST00000341926 FSD2A1L4K1 749 aa10.47□□□□□ -0.73
CAST-204ENST00000341926 TRHP20396 242 aaPredicted RBP10.47□□□□□ -0.73
CAST-204ENST00000341926 NBPF1Q3BBV0 1214 aa10.47□□□□□ -0.73
CAST-204ENST00000341926 SH3BP1Q9Y3L3 701 aa10.47□□□□□ -0.73
CAST-204ENST00000341926 PRDM2Q13029 1718 aa10.47□□□□□ -0.73
CAST-204ENST00000341926 OFD1O75665 1012 aa10.46□□□□□ -0.73
CAST-204ENST00000341926 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.46□□□□□ -0.73
CAST-204ENST00000341926 MS4A1P11836 297 aa10.46□□□□□ -0.74
CAST-204ENST00000341926 FAM13BQ9NYF5 915 aa10.46□□□□□ -0.74
CAST-204ENST00000341926 TTC36A6NLP5 189 aa10.45□□□□□ -0.74
CAST-204ENST00000341926 DYNC1I1O14576 645 aa10.45□□□□□ -0.74
CAST-204ENST00000341926 XRCC6P12956 609 aaKnown RBP eCLIP10.45□□□□□ -0.74
CAST-204ENST00000341926 TSPYL1Q9H0U9 437 aa10.45□□□□□ -0.74
CAST-204ENST00000341926 IFT140Q96RY7 1462 aa10.45□□□□□ -0.74
CAST-204ENST00000341926 ZBED9Q6R2W3 1325 aa10.44□□□□□ -0.74
CAST-204ENST00000341926 FRAT2O75474 233 aaPredicted RBP10.44□□□□□ -0.74
CAST-204ENST00000341926 CHD1O14646 1710 aa10.44□□□□□ -0.74
CAST-204ENST00000341926 CFTRP13569 1480 aa10.44□□□□□ -0.74
CAST-204ENST00000341926 BACH2Q9BYV9 841 aa10.43□□□□□ -0.74
CAST-204ENST00000341926 EFCC1Q9HA90 598 aa10.43□□□□□ -0.74
CAST-204ENST00000341926 AEBP1Q8IUX7 1158 aa10.42□□□□□ -0.74
CAST-204ENST00000341926 CGNQ9P2M7 1197 aaKnown RBP10.42□□□□□ -0.74
CAST-204ENST00000341926 CYB5RLQ6IPT4 315 aa10.42□□□□□ -0.74
CAST-204ENST00000341926 P3H3Q8IVL6 736 aa10.41□□□□□ -0.74
CAST-204ENST00000341926 PDE4AP27815 886 aa10.41□□□□□ -0.74
CAST-204ENST00000341926 BANK1Q8NDB2 785 aa10.41□□□□□ -0.74
CAST-204ENST00000341926 ISY1Q9ULR0 285 aaKnown RBP10.41□□□□□ -0.74
CAST-204ENST00000341926 ERBB4Q15303 1308 aa10.41□□□□□ -0.74
CAST-204ENST00000341926 EIF4G3O43432 1585 aaKnown RBP10.4□□□□□ -0.74
CAST-204ENST00000341926 IRF6O14896 467 aa10.4□□□□□ -0.74
CAST-204ENST00000341926 SATB1Q01826 763 aa10.4□□□□□ -0.74
CAST-204ENST00000341926 RAI14Q9P0K7 980 aa10.4□□□□□ -0.74
CAST-204ENST00000341926 LMOD3Q0VAK6 560 aa10.4□□□□□ -0.75
CAST-204ENST00000341926 NBPF9Q3BBW0 867 aa10.4□□□□□ -0.75
CAST-204ENST00000341926 POGKQ9P215 609 aa10.39□□□□□ -0.75
CAST-204ENST00000341926 MRE11P49959 708 aa10.39□□□□□ -0.75
CAST-204ENST00000341926 SEMA3FQ13275 785 aa10.39□□□□□ -0.75
CAST-204ENST00000341926 TMC1Q8TDI8 760 aa10.38□□□□□ -0.75
CAST-204ENST00000341926 PHLDB1Q86UU1 1377 aa10.38□□□□□ -0.75
CAST-204ENST00000341926 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
CAST-204ENST00000341926 TULP2O00295 520 aa10.38□□□□□ -0.75
CAST-204ENST00000341926 PRR29P0C7W0 189 aa10.38□□□□□ -0.75
CAST-204ENST00000341926 ANP32CO43423 234 aa10.37□□□□□ -0.75
CAST-204ENST00000341926 MAP2K1Q02750 393 aaPredicted RBP10.37□□□□□ -0.75
CAST-204ENST00000341926 PPP1R15AO75807 674 aaPredicted RBP10.36□□□□□ -0.75
CAST-204ENST00000341926 MYH16Q9H6N6 1097 aa10.36□□□□□ -0.75
CAST-204ENST00000341926 CEP83Q9Y592 693 aa10.35□□□□□ -0.75
CAST-204ENST00000341926 KCNJ4P48050 445 aa10.35□□□□□ -0.75
CAST-204ENST00000341926 CHMP4CQ96CF2 233 aa10.35□□□□□ -0.75
CAST-204ENST00000341926 HOXD11P31277 338 aaPredicted RBP10.34□□□□□ -0.75
CAST-204ENST00000341926 NBPF10Q6P3W6 841 aaKnown RBP10.34□□□□□ -0.75
CAST-204ENST00000341926 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.34□□□□□ -0.75
CAST-204ENST00000341926 BSDC1Q9NW68 430 aaPredicted RBP10.34□□□□□ -0.75
CAST-204ENST00000341926 CCDC66A2RUB6 948 aa10.34□□□□□ -0.75
CAST-204ENST00000341926 ZNF500O60304 480 aaPredicted RBP10.34□□□□□ -0.75
CAST-204ENST00000341926 OTUD6BQ8N6M0 293 aa10.34□□□□□ -0.75
CAST-204ENST00000341926 ZNF526Q8TF50 670 aaPredicted RBP10.34□□□□□ -0.75
CAST-204ENST00000341926 MYCBPQ99417 103 aaPredicted RBP10.34□□□□□ -0.75
CAST-204ENST00000341926 CWC22Q9HCG8 908 aaKnown RBP10.34□□□□□ -0.75
CAST-204ENST00000341926 WIZO95785 1651 aa10.34□□□□□ -0.75
CAST-204ENST00000341926 RNF123Q5XPI4 1314 aa10.34□□□□□ -0.75
CAST-204ENST00000341926 HNRNPUQ00839 825 aaKnown RBP eCLIP10.33□□□□□ -0.76
CAST-204ENST00000341926 ZNF692Q9BU19 519 aaPredicted RBP10.33□□□□□ -0.76
CAST-204ENST00000341926 ATF5Q9Y2D1 282 aaPredicted RBP10.33□□□□□ -0.76
CAST-204ENST00000341926 CLASP1Q7Z460 1538 aa10.33□□□□□ -0.76
CAST-204ENST00000341926 LOC102724159A0A0B4J2E5 919 aa10.33□□□□□ -0.76
CAST-204ENST00000341926 GOLIM4O00461 696 aa10.33□□□□□ -0.76
CAST-204ENST00000341926 PWP2Q15269 919 aaKnown RBP10.33□□□□□ -0.76
CAST-204ENST00000341926 UQCRHLA0A096LP55 91 aa10.32□□□□□ -0.76
CAST-204ENST00000341926 UQCRHP07919 91 aa10.32□□□□□ -0.76
CAST-204ENST00000341926 PANK2Q9BZ23 570 aa10.32□□□□□ -0.76
CAST-204ENST00000341926 PLEKHD1A6NEE1 506 aa10.32□□□□□ -0.76
CAST-204ENST00000341926 BRPF1P55201 1214 aaPredicted RBP10.32□□□□□ -0.76
CAST-204ENST00000341926 TIGD1Q96MW7 591 aa10.32□□□□□ -0.76
CAST-204ENST00000341926 TERF2IPQ9NYB0 399 aa10.32□□□□□ -0.76
CAST-204ENST00000341926 CASC1Q6TDU7 716 aa10.31□□□□□ -0.76
CAST-204ENST00000341926 KIF3AQ9Y496 699 aa10.31□□□□□ -0.76
CAST-204ENST00000341926 NCAPGQ9BPX3 1015 aa10.31□□□□□ -0.76
CAST-204ENST00000341926 RBM28Q9NW13 759 aaKnown RBP10.31□□□□□ -0.76
CAST-204ENST00000341926 TRIM6-TRIM34B2RNG4 842 aa10.3□□□□□ -0.76
CAST-204ENST00000341926 CCDC172P0C7W6 258 aa10.3□□□□□ -0.76
CAST-204ENST00000341926 ATXN8OSP0DMR3 200 aa10.3□□□□□ -0.76
CAST-204ENST00000341926 SSR1P43307 286 aaKnown RBP10.3□□□□□ -0.76
CAST-204ENST00000341926 ZSCAN30Q86W11 494 aa10.3□□□□□ -0.76
CAST-204ENST00000341926 TRIM34Q9BYJ4 488 aa10.3□□□□□ -0.76
CAST-204ENST00000341926 DMRT2Q9Y5R5 561 aa10.3□□□□□ -0.76
CAST-204ENST00000341926 DHX57Q6P158 1386 aaKnown RBP10.3□□□□□ -0.76
CAST-204ENST00000341926 NBPF6Q5VWK0 638 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms