RNA–Protein interactions for RNA: ENST00000336356.3

LRAT-201, Transcript of lecithin retinol acyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRAT, Length 4,928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRAT-201ENST00000336356 LMOD2Q6P5Q4 547 aa14.32□□□□□ -0.12
LRAT-201ENST00000336356 PHF23Q9BUL5 403 aaPredicted RBP14.31□□□□□ -0.12
LRAT-201ENST00000336356 RAPGEF6Q8TEU7 1601 aa14.31□□□□□ -0.12
LRAT-201ENST00000336356 ZNF518AQ6AHZ1 1483 aa14.31□□□□□ -0.12
LRAT-201ENST00000336356 HSP90AA1P07900 732 aaKnown RBP14.31□□□□□ -0.12
LRAT-201ENST00000336356 ARAP1Q96P48 1450 aa14.3□□□□□ -0.12
LRAT-201ENST00000336356 PKD2Q13563 968 aa14.3□□□□□ -0.12
LRAT-201ENST00000336356 MEX3CQ5U5Q3 659 aaKnown RBP14.3□□□□□ -0.12
LRAT-201ENST00000336356 ATP10BO94823 1461 aa14.29□□□□□ -0.12
LRAT-201ENST00000336356 RAB3GAP2Q9H2M9 1393 aa14.29□□□□□ -0.12
LRAT-201ENST00000336356 NCOA2Q15596 1464 aa14.28□□□□□ -0.12
LRAT-201ENST00000336356 A0A0G2JS52 829 aa14.28□□□□□ -0.12
LRAT-201ENST00000336356 TXNDC2Q86VQ3 553 aa14.28□□□□□ -0.12
LRAT-201ENST00000336356 ABCC10Q5T3U5 1492 aa14.28□□□□□ -0.12
LRAT-201ENST00000336356 GSE1Q14687 1217 aa14.27□□□□□ -0.12
LRAT-201ENST00000336356 CFAP74Q9C0B2 1584 aa14.27□□□□□ -0.13
LRAT-201ENST00000336356 TNNT2P45379 298 aaPredicted RBP14.27□□□□□ -0.13
LRAT-201ENST00000336356 CTTNBP2Q8WZ74 1663 aa14.27□□□□□ -0.13
LRAT-201ENST00000336356 PNNQ9H307 717 aaKnown RBP14.26□□□□□ -0.13
LRAT-201ENST00000336356 KANK4Q5T7N3 995 aaPredicted RBP14.26□□□□□ -0.13
LRAT-201ENST00000336356 CCDC141Q6ZP82 1450 aa14.26□□□□□ -0.13
LRAT-201ENST00000336356 MSH5O43196 834 aa14.24□□□□□ -0.13
LRAT-201ENST00000336356 RIMBP3CA6NJZ7 1639 aa14.24□□□□□ -0.13
LRAT-201ENST00000336356 RIMBP3BA6NNM3 1639 aa14.24□□□□□ -0.13
LRAT-201ENST00000336356 RIMBP3Q9UFD9 1639 aa14.24□□□□□ -0.13
LRAT-201ENST00000336356 LRRC9Q6ZRR7 1453 aa14.24□□□□□ -0.13
LRAT-201ENST00000336356 PROSER2Q86WR7 435 aaPredicted RBP14.24□□□□□ -0.13
LRAT-201ENST00000336356 NUDCQ9Y266 331 aa14.24□□□□□ -0.13
LRAT-201ENST00000336356 TOM1O60784 492 aa14.24□□□□□ -0.13
LRAT-201ENST00000336356 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
LRAT-201ENST00000336356 FGD6Q6ZV73 1430 aa14.22□□□□□ -0.13
LRAT-201ENST00000336356 C9orf84Q5VXU9 1444 aa14.21□□□□□ -0.13
LRAT-201ENST00000336356 KIAA1107Q9UPP5 1409 aa14.21□□□□□ -0.13
LRAT-201ENST00000336356 ANKRD50Q9ULJ7 1429 aa14.21□□□□□ -0.14
LRAT-201ENST00000336356 MAGI2Q86UL8 1455 aa14.2□□□□□ -0.14
LRAT-201ENST00000336356 KDM5BQ9UGL1 1544 aa14.2□□□□□ -0.14
LRAT-201ENST00000336356 ZBED9Q6R2W3 1325 aa14.2□□□□□ -0.14
LRAT-201ENST00000336356 CLASP1Q7Z460 1538 aa14.2□□□□□ -0.14
LRAT-201ENST00000336356 SUPT6HQ7KZ85 1726 aaKnown RBP14.2□□□□□ -0.14
LRAT-201ENST00000336356 HSPA5P11021 654 aaKnown RBP14.2□□□□□ -0.14
LRAT-201ENST00000336356 CCDC144AA2RUR9 1427 aa14.2□□□□□ -0.14
LRAT-201ENST00000336356 HMGB2P26583 209 aaKnown RBP14.19□□□□□ -0.14
LRAT-201ENST00000336356 WDR43Q15061 677 aaKnown RBP eCLIP14.19□□□□□ -0.14
LRAT-201ENST00000336356 HSP90AA2PQ14568 343 aaPredicted RBP14.19□□□□□ -0.14
LRAT-201ENST00000336356 UHRF1BP1Q6BDS2 1440 aa14.19□□□□□ -0.14
LRAT-201ENST00000336356 ATP10AO60312 1499 aa14.18□□□□□ -0.14
LRAT-201ENST00000336356 ZBTB7CA1YPR0 619 aa14.18□□□□□ -0.14
LRAT-201ENST00000336356 CDK13Q14004 1512 aaKnown RBP14.18□□□□□ -0.14
LRAT-201ENST00000336356 DISP1Q96F81 1524 aa14.18□□□□□ -0.14
LRAT-201ENST00000336356 GOLGA6L22H0YM25 854 aa14.18□□□□□ -0.14
LRAT-201ENST00000336356 DHX29Q7Z478 1369 aaKnown RBP14.17□□□□□ -0.14
LRAT-201ENST00000336356 HDGFL2Q7Z4V5 671 aaPredicted RBP14.17□□□□□ -0.14
LRAT-201ENST00000336356 RPGRIP1LQ68CZ1 1315 aa14.17□□□□□ -0.14
LRAT-201ENST00000336356 VSIG10Q8N0Z9 540 aa14.17□□□□□ -0.14
LRAT-201ENST00000336356 MS4A1P11836 297 aa14.16□□□□□ -0.14
LRAT-201ENST00000336356 SENP3Q9H4L4 574 aaPredicted RBP14.16□□□□□ -0.14
LRAT-201ENST00000336356 PDE4AP27815 886 aa14.16□□□□□ -0.14
LRAT-201ENST00000336356 IL27Q8NEV9 243 aa14.16□□□□□ -0.14
LRAT-201ENST00000336356 MPHOSPH9Q99550 1183 aa14.16□□□□□ -0.14
LRAT-201ENST00000336356 SRPK2P78362 688 aaKnown RBP14.16□□□□□ -0.14
LRAT-201ENST00000336356 DCAF11Q8TEB1 546 aa14.16□□□□□ -0.14
LRAT-201ENST00000336356 KDM6BO15054 1643 aa14.15□□□□□ -0.14
LRAT-201ENST00000336356 CCDC9Q9Y3X0 531 aaKnown RBP14.15□□□□□ -0.14
LRAT-201ENST00000336356 MAP3K1Q13233 1512 aa14.15□□□□□ -0.14
LRAT-201ENST00000336356 TNRQ92752 1358 aa14.14□□□□□ -0.15
LRAT-201ENST00000336356 PSME1Q06323 249 aa14.14□□□□□ -0.15
LRAT-201ENST00000336356 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
LRAT-201ENST00000336356 FAM135AQ9P2D6 1515 aa14.14□□□□□ -0.15
LRAT-201ENST00000336356 RGS3P49796 1198 aa14.14□□□□□ -0.15
LRAT-201ENST00000336356 NUP153P49790 1475 aaKnown RBP14.14□□□□□ -0.15
LRAT-201ENST00000336356 CARD11Q9BXL7 1154 aa14.14□□□□□ -0.15
LRAT-201ENST00000336356 STK26Q9P289 416 aa14.14□□□□□ -0.15
LRAT-201ENST00000336356 RCAN3Q9UKA8 241 aa14.14□□□□□ -0.15
LRAT-201ENST00000336356 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
LRAT-201ENST00000336356 DCAF8L1A6NGE4 600 aa14.13□□□□□ -0.15
LRAT-201ENST00000336356 PKNOX2Q96KN3 472 aa14.12□□□□□ -0.15
LRAT-201ENST00000336356 ZNF644Q9H582 1327 aaPredicted RBP14.12□□□□□ -0.15
LRAT-201ENST00000336356 PAK3O75914 559 aaPredicted RBP14.12□□□□□ -0.15
LRAT-201ENST00000336356 MAGI3Q5TCQ9 1506 aa14.11□□□□□ -0.15
LRAT-201ENST00000336356 A2MP01023 1474 aa14.11□□□□□ -0.15
LRAT-201ENST00000336356 UBE2Q2Q8WVN8 375 aa14.11□□□□□ -0.15
LRAT-201ENST00000336356 RTEL1-TNFRSF6BF6WH68 1400 aa14.11□□□□□ -0.15
LRAT-201ENST00000336356 MAPKBP1O60336 1514 aa14.11□□□□□ -0.15
LRAT-201ENST00000336356 CFAP53Q96M91 514 aa14.1□□□□□ -0.15
LRAT-201ENST00000336356 SENP3-EIF4A1A0A087X0R7 540 aa14.09□□□□□ -0.15
LRAT-201ENST00000336356 GOLGA6L3A6NEY3 463 aa14.09□□□□□ -0.15
LRAT-201ENST00000336356 TMF1P82094 1093 aa14.09□□□□□ -0.15
LRAT-201ENST00000336356 HFM1A2PYH4 1435 aa14.09□□□□□ -0.15
LRAT-201ENST00000336356 ZFYVE16Q7Z3T8 1539 aa14.08□□□□□ -0.15
LRAT-201ENST00000336356 RRBP1Q9P2E9 1410 aaKnown RBP14.08□□□□□ -0.16
LRAT-201ENST00000336356 PRKRIP1Q9H875 184 aaPredicted RBP14.08□□□□□ -0.16
LRAT-201ENST00000336356 TERF2IPQ9NYB0 399 aa14.08□□□□□ -0.16
LRAT-201ENST00000336356 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.08□□□□□ -0.16
LRAT-201ENST00000336356 PDE3BQ13370 1112 aa14.08□□□□□ -0.16
LRAT-201ENST00000336356 TIAM1Q13009 1591 aa14.07□□□□□ -0.16
LRAT-201ENST00000336356 UBAP1LF5GYI3 381 aa14.07□□□□□ -0.16
LRAT-201ENST00000336356 ITSN2Q9NZM3 1697 aa14.06□□□□□ -0.16
LRAT-201ENST00000336356 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
LRAT-201ENST00000336356 SF3B2Q13435 895 aaKnown RBP14.06□□□□□ -0.16
LRAT-201ENST00000336356 CSB-PGBD3P0DP91 1061 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms