RNA–Protein interactions for RNA: ENST00000299345.10

CDH8-201, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-201ENST00000299345 RALBP1Q15311 655 aa18.36■□□□□ 0.53
CDH8-201ENST00000299345 CHD1O14646 1710 aa18.36■□□□□ 0.53
CDH8-201ENST00000299345 ABCC2Q92887 1545 aa18.36■□□□□ 0.53
CDH8-201ENST00000299345 RBM19Q9Y4C8 960 aaKnown RBP18.36■□□□□ 0.53
CDH8-201ENST00000299345 KDM5DQ9BY66 1539 aa18.35■□□□□ 0.53
CDH8-201ENST00000299345 PREX2Q70Z35 1606 aa18.34■□□□□ 0.53
CDH8-201ENST00000299345 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.33■□□□□ 0.53
CDH8-201ENST00000299345 MYBBP1AQ9BQG0 1328 aaKnown RBP18.32■□□□□ 0.52
CDH8-201ENST00000299345 AFAP1Q8N556 730 aa18.32■□□□□ 0.52
CDH8-201ENST00000299345 SALL2Q9Y467 1007 aaPredicted RBP18.32■□□□□ 0.52
CDH8-201ENST00000299345 TMF1P82094 1093 aa18.31■□□□□ 0.52
CDH8-201ENST00000299345 PLCH2O75038 1416 aa18.31■□□□□ 0.52
CDH8-201ENST00000299345 KDM5CP41229 1560 aa18.31■□□□□ 0.52
CDH8-201ENST00000299345 TTC37Q6PGP7 1564 aa18.31■□□□□ 0.52
CDH8-201ENST00000299345 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
CDH8-201ENST00000299345 PNISRQ8TF01 805 aaKnown RBP18.31■□□□□ 0.52
CDH8-201ENST00000299345 NUDCQ9Y266 331 aa18.31■□□□□ 0.52
CDH8-201ENST00000299345 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
CDH8-201ENST00000299345 ERCC6L2Q5T890 1561 aa18.3■□□□□ 0.52
CDH8-201ENST00000299345 CDC42BPBQ9Y5S2 1711 aa18.3■□□□□ 0.52
CDH8-201ENST00000299345 CC2D1BQ5T0F9 858 aaKnown RBP18.28■□□□□ 0.52
CDH8-201ENST00000299345 PRAG1Q86YV5 1406 aa18.28■□□□□ 0.52
CDH8-201ENST00000299345 NLRP13Q86W25 1043 aa18.27■□□□□ 0.52
CDH8-201ENST00000299345 BCORL1Q5H9F3 1711 aa18.27■□□□□ 0.52
CDH8-201ENST00000299345 DUOX2Q9NRD8 1548 aa18.26■□□□□ 0.51
CDH8-201ENST00000299345 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
CDH8-201ENST00000299345 BRD4O60885 1362 aaPredicted RBP18.25■□□□□ 0.51
CDH8-201ENST00000299345 KIF3BO15066 747 aa18.25■□□□□ 0.51
CDH8-201ENST00000299345 KANK1Q14678 1352 aa18.25■□□□□ 0.51
CDH8-201ENST00000299345 TRAPPC8Q9Y2L5 1435 aa18.24■□□□□ 0.51
CDH8-201ENST00000299345 ERBINQ96RT1 1412 aa18.23■□□□□ 0.51
CDH8-201ENST00000299345 ERICH6Q7L0X2 663 aa18.23■□□□□ 0.51
CDH8-201ENST00000299345 CCDC136Q96JN2 1154 aa18.23■□□□□ 0.51
CDH8-201ENST00000299345 PANK3Q9H999 370 aa18.23■□□□□ 0.51
CDH8-201ENST00000299345 MYO5CQ9NQX4 1742 aa18.23■□□□□ 0.51
CDH8-201ENST00000299345 SHROOM2Q13796 1616 aa18.22■□□□□ 0.51
CDH8-201ENST00000299345 POLR1AO95602 1720 aaPredicted RBP18.22■□□□□ 0.51
CDH8-201ENST00000299345 SMG6Q86US8 1419 aaKnown RBP18.22■□□□□ 0.51
CDH8-201ENST00000299345 PLA2R1Q13018 1463 aa18.22■□□□□ 0.51
CDH8-201ENST00000299345 A2MP01023 1474 aa18.21■□□□□ 0.51
CDH8-201ENST00000299345 MAST1Q9Y2H9 1570 aa18.21■□□□□ 0.51
CDH8-201ENST00000299345 CDCA8Q53HL2 280 aa18.2■□□□□ 0.5
CDH8-201ENST00000299345 KNSTRNQ9Y448 316 aa18.19■□□□□ 0.5
CDH8-201ENST00000299345 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
CDH8-201ENST00000299345 UHRF1BP1LA0JNW5 1464 aa18.17■□□□□ 0.5
CDH8-201ENST00000299345 CHGAP10645 457 aaKnown RBP18.17■□□□□ 0.5
CDH8-201ENST00000299345 TESK2Q96S53 571 aa18.16■□□□□ 0.5
CDH8-201ENST00000299345 GPRASP1Q5JY77 1395 aa18.16■□□□□ 0.5
CDH8-201ENST00000299345 UNC13BO14795 1591 aa18.16■□□□□ 0.5
CDH8-201ENST00000299345 PLXNC1O60486 1568 aa18.16■□□□□ 0.5
CDH8-201ENST00000299345 WASHC2CQ9Y4E1 1318 aa18.15■□□□□ 0.5
CDH8-201ENST00000299345 DISP3Q9P2K9 1392 aa18.15■□□□□ 0.5
CDH8-201ENST00000299345 ZCCHC11Q5TAX3 1644 aaKnown RBP18.15■□□□□ 0.5
CDH8-201ENST00000299345 STAC3Q96MF2 364 aa18.14■□□□□ 0.49
CDH8-201ENST00000299345 SCAPERQ9BY12 1400 aa18.14■□□□□ 0.49
CDH8-201ENST00000299345 PER1O15534 1290 aaPredicted RBP18.12■□□□□ 0.49
CDH8-201ENST00000299345 ABCC1P33527 1531 aa18.12■□□□□ 0.49
CDH8-201ENST00000299345 IQGAP3Q86VI3 1631 aa18.12■□□□□ 0.49
CDH8-201ENST00000299345 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
CDH8-201ENST00000299345 RTEL1-TNFRSF6BF6WH68 1400 aa18.11■□□□□ 0.49
CDH8-201ENST00000299345 FANCAO15360 1455 aa18.11■□□□□ 0.49
CDH8-201ENST00000299345 PDE3BQ13370 1112 aa18.1■□□□□ 0.49
CDH8-201ENST00000299345 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
CDH8-201ENST00000299345 PARD3Q8TEW0 1356 aa18.1■□□□□ 0.49
CDH8-201ENST00000299345 WDR7Q9Y4E6 1490 aa18.1■□□□□ 0.49
CDH8-201ENST00000299345 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
CDH8-201ENST00000299345 ATP10AO60312 1499 aa18.09■□□□□ 0.49
CDH8-201ENST00000299345 COL17A1Q9UMD9 1497 aaPredicted RBP18.09■□□□□ 0.49
CDH8-201ENST00000299345 CLASP1Q7Z460 1538 aa18.09■□□□□ 0.49
CDH8-201ENST00000299345 EIF2AK4Q9P2K8 1649 aaKnown RBP18.08■□□□□ 0.49
CDH8-201ENST00000299345 TRPM1Q7Z4N2 1603 aa18.08■□□□□ 0.49
CDH8-201ENST00000299345 ADGRL1O94910 1474 aa18.07■□□□□ 0.48
CDH8-201ENST00000299345 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
CDH8-201ENST00000299345 GGT6Q6P531 493 aa18.06■□□□□ 0.48
CDH8-201ENST00000299345 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
CDH8-201ENST00000299345 MAGI2Q86UL8 1455 aa18.05■□□□□ 0.48
CDH8-201ENST00000299345 RRP1P56182 461 aaKnown RBP18.04■□□□□ 0.48
CDH8-201ENST00000299345 OSCARQ8IYS5 282 aa18.04■□□□□ 0.48
CDH8-201ENST00000299345 CFAP70Q5T0N1 1121 aa18.03■□□□□ 0.48
CDH8-201ENST00000299345 PRDM15P57071 1507 aaPredicted RBP18.03■□□□□ 0.48
CDH8-201ENST00000299345 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.48
CDH8-201ENST00000299345 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.47
CDH8-201ENST00000299345 ASXL2Q76L83 1435 aa18.02■□□□□ 0.47
CDH8-201ENST00000299345 RNF123Q5XPI4 1314 aa18.01■□□□□ 0.47
CDH8-201ENST00000299345 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
CDH8-201ENST00000299345 ATP7AQ04656 1500 aa18■□□□□ 0.47
CDH8-201ENST00000299345 ZFYVE16Q7Z3T8 1539 aa18■□□□□ 0.47
CDH8-201ENST00000299345 ARAP3Q8WWN8 1544 aa17.99■□□□□ 0.47
CDH8-201ENST00000299345 ADAMTS8Q9UP79 889 aa17.99■□□□□ 0.47
CDH8-201ENST00000299345 PPP2R1AP30153 589 aa17.99■□□□□ 0.47
CDH8-201ENST00000299345 EXOC6Q8TAG9 804 aa17.98■□□□□ 0.47
CDH8-201ENST00000299345 PTPRTO14522 1441 aa17.96■□□□□ 0.47
CDH8-201ENST00000299345 TRPM2O94759 1503 aa17.96■□□□□ 0.47
CDH8-201ENST00000299345 ADGRF5Q8IZF2 1346 aa17.96■□□□□ 0.47
CDH8-201ENST00000299345 LAMC1P11047 1609 aa17.94■□□□□ 0.46
CDH8-201ENST00000299345 ANP32AP39687 249 aaKnown RBP17.94■□□□□ 0.46
CDH8-201ENST00000299345 AMER1Q5JTC6 1135 aaPredicted RBP17.93■□□□□ 0.46
CDH8-201ENST00000299345 TRAK1Q9UPV9 953 aa17.93■□□□□ 0.46
CDH8-201ENST00000299345 E9PCH4 1651 aa17.92■□□□□ 0.46
CDH8-201ENST00000299345 PLIN1O60240 522 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms