RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 DHX29Q7Z478 1369 aaKnown RBP12.75□□□□□ -0.37
SSR3-201ENST00000265044 DENND4BO75064 1496 aaPredicted RBP12.75□□□□□ -0.37
SSR3-201ENST00000265044 PZPP20742 1482 aa12.75□□□□□ -0.37
SSR3-201ENST00000265044 PREX2Q70Z35 1606 aa12.74□□□□□ -0.37
SSR3-201ENST00000265044 NEFLP07196 543 aa12.74□□□□□ -0.37
SSR3-201ENST00000265044 GCC2Q8IWJ2 1684 aa12.74□□□□□ -0.37
SSR3-201ENST00000265044 NBPF1Q3BBV0 1214 aa12.73□□□□□ -0.37
SSR3-201ENST00000265044 DUOX2Q9NRD8 1548 aa12.73□□□□□ -0.37
SSR3-201ENST00000265044 HNRNPUQ00839 825 aaKnown RBP eCLIP12.73□□□□□ -0.37
SSR3-201ENST00000265044 ARHGEF12Q9NZN5 1544 aa12.72□□□□□ -0.37
SSR3-201ENST00000265044 ZNF518AQ6AHZ1 1483 aa12.72□□□□□ -0.37
SSR3-201ENST00000265044 TMF1P82094 1093 aa12.72□□□□□ -0.37
SSR3-201ENST00000265044 ARHGEF5Q12774 1597 aa12.72□□□□□ -0.37
SSR3-201ENST00000265044 TMC1Q8TDI8 760 aa12.71□□□□□ -0.37
SSR3-201ENST00000265044 WASHC2AQ641Q2 1341 aa12.71□□□□□ -0.38
SSR3-201ENST00000265044 SAFB2Q14151 953 aaKnown RBP eCLIP12.71□□□□□ -0.38
SSR3-201ENST00000265044 CDC42BPBQ9Y5S2 1711 aa12.71□□□□□ -0.38
SSR3-201ENST00000265044 ERBINQ96RT1 1412 aa12.7□□□□□ -0.38
SSR3-201ENST00000265044 FAM135AQ9P2D6 1515 aa12.7□□□□□ -0.38
SSR3-201ENST00000265044 STK26Q9P289 416 aa12.7□□□□□ -0.38
SSR3-201ENST00000265044 RTEL1-TNFRSF6BF6WH68 1400 aa12.69□□□□□ -0.38
SSR3-201ENST00000265044 ADGBQ8N7X0 1667 aa12.69□□□□□ -0.38
SSR3-201ENST00000265044 CDCA8Q53HL2 280 aa12.68□□□□□ -0.38
SSR3-201ENST00000265044 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
SSR3-201ENST00000265044 A2MP01023 1474 aa12.67□□□□□ -0.38
SSR3-201ENST00000265044 SENP3-EIF4A1A0A087X0R7 540 aa12.67□□□□□ -0.38
SSR3-201ENST00000265044 TRAK1Q9UPV9 953 aa12.67□□□□□ -0.38
SSR3-201ENST00000265044 ABCC1P33527 1531 aa12.67□□□□□ -0.38
SSR3-201ENST00000265044 CFAP70Q5T0N1 1121 aa12.66□□□□□ -0.38
SSR3-201ENST00000265044 CC2D1BQ5T0F9 858 aaKnown RBP12.66□□□□□ -0.38
SSR3-201ENST00000265044 POGKQ9P215 609 aa12.66□□□□□ -0.38
SSR3-201ENST00000265044 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
SSR3-201ENST00000265044 CCDC7Q96M83 1385 aa12.65□□□□□ -0.38
SSR3-201ENST00000265044 KNSTRNQ9Y448 316 aa12.65□□□□□ -0.38
SSR3-201ENST00000265044 C11orf95C9JLR9 678 aaPredicted RBP12.65□□□□□ -0.38
SSR3-201ENST00000265044 VGFO15240 615 aaPredicted RBP12.65□□□□□ -0.38
SSR3-201ENST00000265044 SALL2Q9Y467 1007 aaPredicted RBP12.64□□□□□ -0.39
SSR3-201ENST00000265044 PELP1Q8IZL8 1130 aaKnown RBP12.63□□□□□ -0.39
SSR3-201ENST00000265044 CCER2I3L3R5 266 aa12.63□□□□□ -0.39
SSR3-201ENST00000265044 TMEM132EQ6IEE7 984 aa12.63□□□□□ -0.39
SSR3-201ENST00000265044 STAC3Q96MF2 364 aa12.62□□□□□ -0.39
SSR3-201ENST00000265044 FBXO31Q5XUX0 539 aaPredicted RBP12.62□□□□□ -0.39
SSR3-201ENST00000265044 POGZQ7Z3K3 1410 aa12.62□□□□□ -0.39
SSR3-201ENST00000265044 TEX14Q8IWB6 1497 aa12.6□□□□□ -0.39
SSR3-201ENST00000265044 HDGFP51858 240 aaKnown RBP12.6□□□□□ -0.39
SSR3-201ENST00000265044 NEO1Q92859 1461 aa12.6□□□□□ -0.39
SSR3-201ENST00000265044 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
SSR3-201ENST00000265044 IDI1Q13907 227 aa12.59□□□□□ -0.39
SSR3-201ENST00000265044 PRKRIP1Q9H875 184 aaPredicted RBP12.59□□□□□ -0.39
SSR3-201ENST00000265044 SLC52A1Q9NWF4 448 aa12.59□□□□□ -0.39
SSR3-201ENST00000265044 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
SSR3-201ENST00000265044 SRPK2P78362 688 aaKnown RBP12.59□□□□□ -0.39
SSR3-201ENST00000265044 CFAP65Q6ZU64 1925 aaKnown RBP12.58□□□□□ -0.39
SSR3-201ENST00000265044 CROCC2H7BZ55 1655 aa12.58□□□□□ -0.39
SSR3-201ENST00000265044 ABCA9Q8IUA7 1624 aa12.58□□□□□ -0.4
SSR3-201ENST00000265044 RIMBP3CA6NJZ7 1639 aa12.58□□□□□ -0.4
SSR3-201ENST00000265044 RIMBP3BA6NNM3 1639 aa12.58□□□□□ -0.4
SSR3-201ENST00000265044 RIMBP3Q9UFD9 1639 aa12.58□□□□□ -0.4
SSR3-201ENST00000265044 ARAP3Q8WWN8 1544 aa12.58□□□□□ -0.4
SSR3-201ENST00000265044 PANK3Q9H999 370 aa12.58□□□□□ -0.4
SSR3-201ENST00000265044 ADGRF5Q8IZF2 1346 aa12.58□□□□□ -0.4
SSR3-201ENST00000265044 SCAF1Q9H7N4 1312 aaKnown RBP12.58□□□□□ -0.4
SSR3-201ENST00000265044 TSPOAP1O95153 1857 aa12.57□□□□□ -0.4
SSR3-201ENST00000265044 YEATS2Q9ULM3 1422 aa12.57□□□□□ -0.4
SSR3-201ENST00000265044 TNNT2P45379 298 aaPredicted RBP12.56□□□□□ -0.4
SSR3-201ENST00000265044 ZFYVE16Q7Z3T8 1539 aa12.55□□□□□ -0.4
SSR3-201ENST00000265044 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
SSR3-201ENST00000265044 MAST1Q9Y2H9 1570 aa12.54□□□□□ -0.4
SSR3-201ENST00000265044 WDR43Q15061 677 aaKnown RBP eCLIP12.53□□□□□ -0.4
SSR3-201ENST00000265044 KTN1Q86UP2 1357 aaKnown RBP12.53□□□□□ -0.4
SSR3-201ENST00000265044 PLXNC1O60486 1568 aa12.52□□□□□ -0.4
SSR3-201ENST00000265044 MLH3Q9UHC1 1453 aa12.52□□□□□ -0.4
SSR3-201ENST00000265044 CENPJQ9HC77 1338 aaPredicted RBP12.52□□□□□ -0.4
SSR3-201ENST00000265044 CEBPAP49715 358 aaPredicted RBP12.52□□□□□ -0.41
SSR3-201ENST00000265044 PRAG1Q86YV5 1406 aa12.51□□□□□ -0.41
SSR3-201ENST00000265044 CFAP74Q9C0B2 1584 aa12.51□□□□□ -0.41
SSR3-201ENST00000265044 EID1Q9Y6B2 187 aa12.51□□□□□ -0.41
SSR3-201ENST00000265044 MINK1Q8N4C8 1332 aaPredicted RBP12.51□□□□□ -0.41
SSR3-201ENST00000265044 RALBP1Q15311 655 aa12.5□□□□□ -0.41
SSR3-201ENST00000265044 NOS1P29475 1434 aa12.5□□□□□ -0.41
SSR3-201ENST00000265044 PLA2R1Q13018 1463 aa12.5□□□□□ -0.41
SSR3-201ENST00000265044 RPGRIP1LQ68CZ1 1315 aa12.5□□□□□ -0.41
SSR3-201ENST00000265044 FKBP8Q14318 412 aa12.5□□□□□ -0.41
SSR3-201ENST00000265044 RALGAPBQ86X10 1494 aa12.49□□□□□ -0.41
SSR3-201ENST00000265044 KDM5DQ9BY66 1539 aa12.49□□□□□ -0.41
SSR3-201ENST00000265044 ATP10AO60312 1499 aa12.48□□□□□ -0.41
SSR3-201ENST00000265044 PPP6R1Q9UPN7 881 aa12.48□□□□□ -0.41
SSR3-201ENST00000265044 NPATQ14207 1427 aa12.47□□□□□ -0.41
SSR3-201ENST00000265044 HECW2Q9P2P5 1572 aa12.47□□□□□ -0.41
SSR3-201ENST00000265044 CCDC184Q52MB2 194 aa12.47□□□□□ -0.41
SSR3-201ENST00000265044 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
SSR3-201ENST00000265044 NUTM2FA1L443 756 aa12.47□□□□□ -0.41
SSR3-201ENST00000265044 EVC2Q86UK5 1308 aa12.46□□□□□ -0.41
SSR3-201ENST00000265044 PPM1GO15355 546 aaPredicted RBP12.46□□□□□ -0.41
SSR3-201ENST00000265044 MORC1Q86VD1 984 aa12.46□□□□□ -0.41
SSR3-201ENST00000265044 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.46□□□□□ -0.41
SSR3-201ENST00000265044 UHRF1BP1Q6BDS2 1440 aa12.46□□□□□ -0.42
SSR3-201ENST00000265044 NLRP13Q86W25 1043 aa12.46□□□□□ -0.42
SSR3-201ENST00000265044 CABP2Q9NPB3 220 aa12.45□□□□□ -0.42
SSR3-201ENST00000265044 IRX6P78412 446 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms