RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Gm6268A2A3U9 297 aa17.25■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Usp40Q8BWR4 1235 aa17.25■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Rwdd1Q9CQK7 243 aa17.24■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Fgd6Q69ZL1 1399 aa17.24■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 BC005561E9Q5E2 1589 aa17.23■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Pla2r1Q62028 1487 aa17.23■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 U2af1Q9D883 239 aaKnown RBP17.23■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Tcerg1Q8CGF7 1100 aaKnown RBP17.23■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Arhgap5P97393 1501 aa17.23■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 1700019A02RikA0A087WPV9 146 aa17.22■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Zscan10Q3URR7 782 aa17.22■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Cd109Q8R422 1442 aa17.22■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Ccdc141E9Q8Q6 1531 aa17.22■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Arid4bA2CG63 1314 aaKnown RBP17.21■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Mapk8ip3Q9ESN9 1337 aa17.21■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Golga2Q921M4 999 aa17.21■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Naip5Q9R016 1403 aa17.21■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Disp1Q3TDN0 1521 aa17.21■□□□□ 0.35
Pdgfra-205ENSMUST00000201711 Fam184bQ0KK56 942 aa17.2■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Il16O54824 1322 aa17.19■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Hsp90aa1P07901 733 aaKnown RBP17.19■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Birc3O08863 600 aa17.18■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Magi1Q6RHR9 1471 aa17.18■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Eif4g1Q6NZJ6 1600 aaKnown RBP17.17■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 PnisrA2AJT4 805 aaKnown RBP17.17■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Chmp5Q9D7S9 219 aa17.17■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 MlecQ6ZQI3 291 aaKnown RBP17.17■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Gm14025A2AP89 1413 aa17.17■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Kcnh8P59111 1102 aa17.16■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Kif7B7ZNG0 1348 aa17.16■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Hsp90ab1P11499 724 aaKnown RBP17.16■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Sall3Q62255 1320 aa17.16■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 WizO88286 1684 aaKnown RBP17.16■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Myom3A2ABU4 1439 aa17.14■□□□□ 0.34
Pdgfra-205ENSMUST00000201711 Utp14aQ640M1 767 aaKnown RBP17.14■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Znf330Q922H9 316 aa17.14■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Mink1Q9JM52 1308 aa17.12■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Rock1P70335 1354 aa17.12■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Txndc2Q6P902 515 aa17.11■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Shq1Q7TMX5 569 aa17.11■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Cluap1Q8R3P7 413 aa17.11■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Prdm16A2A935 1275 aa17.1■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Tmco5bQ80X59 307 aa17.09■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Kif21aQ9QXL2 1672 aa17.09■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Fam135aQ6NS59 1506 aa17.09■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Washc2Q6PGL7 1334 aa17.09■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Fgd1P52734 960 aa17.08■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Ksr2Q3UVC0 959 aa17.08■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 ErbinQ80TH2 1402 aa17.08■□□□□ 0.33
Pdgfra-205ENSMUST00000201711 Sox12Q04890 314 aa17.08■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Zfp444Q3TDV8 331 aaKnown RBP17.07■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 U2surpQ6NV83 1029 aaKnown RBP17.07■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Puf60Q3UEB3 564 aaKnown RBP17.07■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 ChgaP26339 463 aaKnown RBP17.06■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Rprd2Q6NXI6 1469 aaKnown RBP17.06■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Magi3Q9EQJ9 1476 aa17.06■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Vsig10D3YX43 558 aa17.06■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Nsd2Q8BVE8 1365 aa17.05■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Psme1P97371 249 aa17.05■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Tsen2Q6P7W5 460 aa17.05■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Plekhg5Q66T02 1073 aa17.04■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Erich3F6QRE9 1637 aa17.03■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Pak3Q61036 559 aa17.03■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Ipo9Q91YE6 1041 aa17.03■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Arhgef40Q3UPH7 1517 aa17.02■□□□□ 0.32
Pdgfra-205ENSMUST00000201711 Trappc8E9PWG2 1437 aa17.01■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Ncoa1P70365 1447 aa17.01■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Pibf1E9Q6K3 756 aa17.01■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Shroom2A2ALU4 1481 aa17.01■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Adgrb2Q8CGM1 1561 aa17■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 L3mbtl2P59178 703 aa17■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Ppp2r1aQ76MZ3 589 aa17■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Q9D9H8 365 aa17■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Rfx7F8VPJ6 1459 aa17■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 PrxO55103 1391 aa16.98■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Lmo7E9PYF4 1699 aaKnown RBP16.98■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Prex2Q3LAC4 1598 aa16.98■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 GsdmaQ9EST1 446 aa16.97■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 CenpjQ569L8 1344 aa16.97■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Ccdc30Q8BVF4 654 aa16.96■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Stard8Q8K031 1019 aa16.96■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Spryd3E9Q9B3 442 aa16.96■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 EspnQ9ET47 871 aa16.96■□□□□ 0.31
Pdgfra-205ENSMUST00000201711 Irx3P81067 507 aa16.95■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Unc13aQ4KUS2 1712 aa16.95■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 PrkcshO08795 521 aa16.95■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Kdm5bQ80Y84 1544 aa16.94■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Apaf1O88879 1249 aa16.94■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Mbd3Q9Z2D8 285 aaKnown RBP16.94■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Mlh3A0A1Y7VMP7 1443 aa16.93■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Rapgef6Q5NCJ1 1609 aa16.93■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Pik3c2gO70167 1506 aa16.92■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 DekQ7TNV0 380 aaKnown RBP16.92■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Kif16bB1AVY7 1312 aa16.92■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Afap1Q80YS6 731 aa16.91■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Pank1Q8K4K6 548 aa16.91■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 NudcO35685 332 aaKnown RBP16.91■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Atp10dQ8K2X1 1416 aa16.9■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Lmtk2Q3TYD6 1471 aa16.9■□□□□ 0.3
Pdgfra-205ENSMUST00000201711 Ppm1gQ61074 542 aa16.9■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms