RNA–Protein interactions for RNA: ENSMUST00000176745.7

Cux1-211, Transcript of Homeobox protein cut-like 1, mousemouse

TSL 1 (best) BASIC

Gene Cux1, Length 2,831 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-211ENSMUST00000176745 Mia2Q91ZV0 1396 aa13.46□□□□□ -0.25
Cux1-211ENSMUST00000176745 Exoc6Q8R313 802 aa13.46□□□□□ -0.25
Cux1-211ENSMUST00000176745 Abca8bQ8K440 1620 aa13.46□□□□□ -0.25
Cux1-211ENSMUST00000176745 Rnf17Q99MV7 1640 aa13.46□□□□□ -0.26
Cux1-211ENSMUST00000176745 AI481877A2ALV5 1481 aa13.45□□□□□ -0.26
Cux1-211ENSMUST00000176745 Mlh3A0A1Y7VMP7 1443 aa13.45□□□□□ -0.26
Cux1-211ENSMUST00000176745 Vps8Q0P5W1 1427 aa13.45□□□□□ -0.26
Cux1-211ENSMUST00000176745 Zfp91Q62511 572 aa13.45□□□□□ -0.26
Cux1-211ENSMUST00000176745 Adcy10Q8C0T9 1614 aa13.45□□□□□ -0.26
Cux1-211ENSMUST00000176745 PtprtQ99M80 1454 aa13.44□□□□□ -0.26
Cux1-211ENSMUST00000176745 Gm13695A2AK44 830 aa13.44□□□□□ -0.26
Cux1-211ENSMUST00000176745 Caskin1Q6P9K8 1431 aa13.44□□□□□ -0.26
Cux1-211ENSMUST00000176745 AU015836B2RUM3 263 aa13.44□□□□□ -0.26
Cux1-211ENSMUST00000176745 Pprc1Q6NZN1 1644 aa13.43□□□□□ -0.26
Cux1-211ENSMUST00000176745 Pdcd11Q6NS46 1862 aaKnown RBP13.43□□□□□ -0.26
Cux1-211ENSMUST00000176745 ChgaP26339 463 aaKnown RBP13.42□□□□□ -0.26
Cux1-211ENSMUST00000176745 A2mQ6GQT1 1474 aa13.41□□□□□ -0.26
Cux1-211ENSMUST00000176745 Naip2Q9QUK4 1447 aa13.4□□□□□ -0.26
Cux1-211ENSMUST00000176745 Arhgef40Q3UPH7 1517 aa13.39□□□□□ -0.27
Cux1-211ENSMUST00000176745 PnisrA2AJT4 805 aaKnown RBP13.39□□□□□ -0.27
Cux1-211ENSMUST00000176745 Ube2uB1AUC4 352 aa13.39□□□□□ -0.27
Cux1-211ENSMUST00000176745 L3mbtl2P59178 703 aa13.39□□□□□ -0.27
Cux1-211ENSMUST00000176745 Ofd1Q80Z25 1017 aa13.39□□□□□ -0.27
Cux1-211ENSMUST00000176745 Rfx7F8VPJ6 1459 aa13.38□□□□□ -0.27
Cux1-211ENSMUST00000176745 Lrrc9Q8CDN9 1456 aa13.38□□□□□ -0.27
Cux1-211ENSMUST00000176745 Cfap74Q3UY96 1578 aa13.37□□□□□ -0.27
Cux1-211ENSMUST00000176745 Ncoa1P70365 1447 aa13.37□□□□□ -0.27
Cux1-211ENSMUST00000176745 Setbp1Q9Z180 1582 aa13.36□□□□□ -0.27
Cux1-211ENSMUST00000176745 Gm32742A0A1B0GT42 1604 aa13.36□□□□□ -0.27
Cux1-211ENSMUST00000176745 Col17a1Q07563 1470 aa13.36□□□□□ -0.27
Cux1-211ENSMUST00000176745 Atp10dQ8K2X1 1416 aa13.36□□□□□ -0.27
Cux1-211ENSMUST00000176745 Neurl4Q5NCX5 1563 aa13.36□□□□□ -0.27
Cux1-211ENSMUST00000176745 Kdm6bQ5NCY0 1641 aa13.36□□□□□ -0.27
Cux1-211ENSMUST00000176745 Tshz2Q68FE9 1030 aa13.35□□□□□ -0.27
Cux1-211ENSMUST00000176745 Hecw1Q8K4P8 1604 aa13.34□□□□□ -0.27
Cux1-211ENSMUST00000176745 Adgrl3Q80TS3 1537 aa13.34□□□□□ -0.27
Cux1-211ENSMUST00000176745 Abcc5Q9R1X5 1436 aa13.33□□□□□ -0.28
Cux1-211ENSMUST00000176745 Fhod3Q76LL6 1578 aa13.32□□□□□ -0.28
Cux1-211ENSMUST00000176745 Plekhh2Q8C115 1491 aa13.32□□□□□ -0.28
Cux1-211ENSMUST00000176745 Stard8Q8K031 1019 aa13.32□□□□□ -0.28
Cux1-211ENSMUST00000176745 Mast1Q9R1L5 1570 aa13.32□□□□□ -0.28
Cux1-211ENSMUST00000176745 Abcc3B2RX12 1523 aa13.32□□□□□ -0.28
Cux1-211ENSMUST00000176745 Il16O54824 1322 aa13.32□□□□□ -0.28
Cux1-211ENSMUST00000176745 Ak9G3UYQ4 1894 aa13.29□□□□□ -0.28
Cux1-211ENSMUST00000176745 Kdm3bQ6ZPY7 1562 aa13.29□□□□□ -0.28
Cux1-211ENSMUST00000176745 Dennd4bQ3U1Y4 1499 aa13.29□□□□□ -0.28
Cux1-211ENSMUST00000176745 Gm156Q58A37 223 aa13.29□□□□□ -0.28
Cux1-211ENSMUST00000176745 Zfyve16Q80U44 1528 aa13.29□□□□□ -0.28
Cux1-211ENSMUST00000176745 Znf608Q56A10 1511 aa13.28□□□□□ -0.28
Cux1-211ENSMUST00000176745 Fmn2Q9JL04 1578 aa13.28□□□□□ -0.28
Cux1-211ENSMUST00000176745 Arhgap5P97393 1501 aa13.28□□□□□ -0.28
Cux1-211ENSMUST00000176745 IbspQ61711 324 aa13.27□□□□□ -0.28
Cux1-211ENSMUST00000176745 Ythdc1E9Q5K9 736 aaKnown RBP13.27□□□□□ -0.29
Cux1-211ENSMUST00000176745 Chic2Q9D9G3 165 aa13.27□□□□□ -0.29
Cux1-211ENSMUST00000176745 Fkbp15Q6P9Q6 1216 aaKnown RBP13.26□□□□□ -0.29
Cux1-211ENSMUST00000176745 Fam43aQ8BUP8 424 aa13.26□□□□□ -0.29
Cux1-211ENSMUST00000176745 DekQ7TNV0 380 aaKnown RBP13.26□□□□□ -0.29
Cux1-211ENSMUST00000176745 Clasp1Q80TV8 1535 aaKnown RBP13.25□□□□□ -0.29
Cux1-211ENSMUST00000176745 Rsph4aQ8BYM7 716 aa13.25□□□□□ -0.29
Cux1-211ENSMUST00000176745 SphkapQ6NSW3 1687 aa13.25□□□□□ -0.29
Cux1-211ENSMUST00000176745 Mtus2Q3UHD3 1353 aa13.25□□□□□ -0.29
Cux1-211ENSMUST00000176745 Kidins220E9Q9B7 1793 aa13.25□□□□□ -0.29
Cux1-211ENSMUST00000176745 CanxP35564 591 aaKnown RBP13.24□□□□□ -0.29
Cux1-211ENSMUST00000176745 Dusp27Q148W8 1138 aa13.24□□□□□ -0.29
Cux1-211ENSMUST00000176745 Tdrd9Q14BI7 1383 aa13.24□□□□□ -0.29
Cux1-211ENSMUST00000176745 Adgrl2Q8JZZ7 1487 aa13.24□□□□□ -0.29
Cux1-211ENSMUST00000176745 Abca9Q8K449 1623 aa13.24□□□□□ -0.29
Cux1-211ENSMUST00000176745 Erbb3Q61526 1339 aa13.24□□□□□ -0.29
Cux1-211ENSMUST00000176745 Nkx1-2P42580 305 aa13.23□□□□□ -0.29
Cux1-211ENSMUST00000176745 Sart3Q9JLI8 962 aaKnown RBP13.23□□□□□ -0.29
Cux1-211ENSMUST00000176745 Mink1Q9JM52 1308 aa13.22□□□□□ -0.29
Cux1-211ENSMUST00000176745 Mphosph9A6H5Y1 991 aa13.21□□□□□ -0.29
Cux1-211ENSMUST00000176745 AglF8VPN4 1532 aa13.21□□□□□ -0.29
Cux1-211ENSMUST00000176745 Nom1Q3UFM5 854 aaKnown RBP13.21□□□□□ -0.3
Cux1-211ENSMUST00000176745 Cdc42bpbQ7TT50 1713 aa13.2□□□□□ -0.3
Cux1-211ENSMUST00000176745 Lamc1P02468 1607 aaKnown RBP13.2□□□□□ -0.3
Cux1-211ENSMUST00000176745 Kiaa0556Q8C753 1610 aa13.2□□□□□ -0.3
Cux1-211ENSMUST00000176745 Kank1E9Q238 1360 aa13.2□□□□□ -0.3
Cux1-211ENSMUST00000176745 Prkrip1Q9CWV6 186 aaKnown RBP13.2□□□□□ -0.3
Cux1-211ENSMUST00000176745 Ttll13A4Q9F6 804 aa13.19□□□□□ -0.3
Cux1-211ENSMUST00000176745 Kif21bQ9QXL1 1668 aa13.19□□□□□ -0.3
Cux1-211ENSMUST00000176745 Usp47Q8BY87 1376 aa13.19□□□□□ -0.3
Cux1-211ENSMUST00000176745 Trappc8E9PWG2 1437 aa13.18□□□□□ -0.3
Cux1-211ENSMUST00000176745 Tex2Q6ZPJ0 1128 aaKnown RBP13.18□□□□□ -0.3
Cux1-211ENSMUST00000176745 Ttc37F8VPK0 1563 aa13.18□□□□□ -0.3
Cux1-211ENSMUST00000176745 Cabp1Q9JLK7 227 aa13.17□□□□□ -0.3
Cux1-211ENSMUST00000176745 Adgrb2Q8CGM1 1561 aa13.17□□□□□ -0.3
Cux1-211ENSMUST00000176745 Trpm2Q91YD4 1506 aa13.17□□□□□ -0.3
Cux1-211ENSMUST00000176745 Abca17E9PX95 1733 aa13.15□□□□□ -0.3
Cux1-211ENSMUST00000176745 AlkP97793 1621 aa13.15□□□□□ -0.3
Cux1-211ENSMUST00000176745 B4galnt3Q6L8S8 986 aa13.14□□□□□ -0.31
Cux1-211ENSMUST00000176745 Kdm5cP41230 1554 aa13.14□□□□□ -0.31
Cux1-211ENSMUST00000176745 Mre11Q61216 706 aa13.14□□□□□ -0.31
Cux1-211ENSMUST00000176745 Pdlim2Q8R1G6 349 aa13.14□□□□□ -0.31
Cux1-211ENSMUST00000176745 Zbtb7cQ8VCZ7 619 aa13.14□□□□□ -0.31
Cux1-211ENSMUST00000176745 Rprd2Q6NXI6 1469 aaKnown RBP13.14□□□□□ -0.31
Cux1-211ENSMUST00000176745 Cul9Q80TT8 1865 aa13.14□□□□□ -0.31
Cux1-211ENSMUST00000176745 Plekhg5Q66T02 1073 aa13.13□□□□□ -0.31
Cux1-211ENSMUST00000176745 Dnai1Q8C0M8 701 aa13.13□□□□□ -0.31
Cux1-211ENSMUST00000176745 Pkd2O35245 966 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 8.6 ms