RNA–Protein interactions for RNA: ENSMUST00000171404.7

Gtf3c4-204, Transcript of General transcription factor 3C polypeptide 4, mousemouse

TSL 1 (best) BASIC

Gene Gtf3c4, Length 7,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c4-204ENSMUST00000171404 Bcl11bQ99PV8 884 aa19.69■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Fan1Q69ZT1 1020 aa19.69■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Lemd3Q9WU40 921 aa19.69■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Fam193aQ8CGI1 1231 aaKnown RBP19.68■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Chmp4cQ9D7F7 232 aa19.68■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 PtmsQ9D0J8 101 aaKnown RBP19.67■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Kri1Q8VDQ9 704 aaKnown RBP19.67■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Pde3bQ61409 1100 aa19.66■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Ccar1Q8CH18 1146 aaKnown RBP19.66■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Drc7Q6V3W6 876 aa19.66■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 FosbP13346 338 aa19.65■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Eif2s2Q99L45 331 aaKnown RBP19.64■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Nup155Q99P88 1391 aaKnown RBP19.64■□□□□ 0.74
Gtf3c4-204ENSMUST00000171404 Arhgap35Q91YM2 1499 aa19.64■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Ap3b2Q9JME5 1082 aa19.63■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 HdgfP51859 237 aaKnown RBP19.62■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Hdgfl1Q2VPR5 283 aa19.62■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Wdr78E9PYY5 807 aa19.61■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Trim30aP15533 496 aa19.61■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Paf1Q8K2T8 535 aa19.61■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Ccdc47Q9D024 483 aaKnown RBP19.61■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Srcin1Q9QWI6 1250 aa19.6■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Tpm3P21107 285 aaKnown RBP19.6■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Polr3gQ6NXY9 223 aa19.6■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Tsen2Q6P7W5 460 aa19.6■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Cabp4Q8VHC5 271 aa19.59■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 IbspQ61711 324 aa19.59■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Krt82Q99M74 516 aa19.59■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Baz1bQ9Z277 1479 aa19.58■□□□□ 0.73
Gtf3c4-204ENSMUST00000171404 Rrp12Q6P5B0 1295 aaKnown RBP19.58■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Fyco1Q8VDC1 1437 aa19.57■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Sf3a1Q8K4Z5 791 aaKnown RBP19.57■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Dhx16G3X8X0 1044 aaKnown RBP19.56■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Utp14aQ640M1 767 aaKnown RBP19.56■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Pip4k2bQ80XI4 416 aa19.56■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 CenpjQ569L8 1344 aa19.56■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Pank3Q8R2W9 370 aa19.55■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Gm21969J3QJZ1 289 aa19.55■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Ftsj3Q9DBE9 838 aaKnown RBP19.55■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Fnbp4Q6ZQ03 1031 aa19.54■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Kdm5dQ62240 1548 aa19.54■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Ccdc60Q8C4J0 545 aa19.54■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Tpm4Q6IRU2 248 aa19.53■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Gabpb2P81069 414 aa19.53■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Stk31Q99MW1 1018 aa19.53■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Nolc1E9Q5C9 702 aaKnown RBP19.52■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Ylpm1Q9R0I7 1386 aaKnown RBP19.52■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Plekhh2Q8C115 1491 aa19.52■□□□□ 0.72
Gtf3c4-204ENSMUST00000171404 Ccdc88bQ4QRL3 1481 aa19.51■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Rfx1P48377 963 aa19.51■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Znf704Q9ERQ3 566 aa19.5■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Utp3Q9JI13 469 aaKnown RBP19.5■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 A0A0U1RNP2 1173 aa19.49■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Tceal9Q9DD24 104 aa19.49■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 BcanQ61361 883 aa19.49■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Mink1Q9JM52 1308 aa19.48■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Ccdc43Q9CR29 222 aaKnown RBP19.48■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Neurod6P48986 337 aa19.48■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Tpm2P58774 284 aa19.48■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Cep162Q6ZQ06 1403 aa19.48■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Shq1Q7TMX5 569 aa19.47■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Nap1l3Q794H2 544 aa19.46■□□□□ 0.71
Gtf3c4-204ENSMUST00000171404 Becn1O88597 448 aa19.45■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Inpp5dQ9ES52 1191 aa19.45■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Sytl4Q9R0Q1 673 aa19.45■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Ccp110Q7TSH4 1004 aa19.44■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Rsph3aQ3UFY4 516 aa19.44■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Bcl2l13P59017 434 aa19.44■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Filip1lQ6P6L0 1131 aa19.43■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Odf2A3KGV1 830 aaKnown RBP19.43■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Atp6v1dP57746 247 aa19.43■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Usp40Q8BWR4 1235 aa19.42■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Triml2E9PW10 424 aa19.42■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Gm21190A0A0G2JGJ6 266 aa19.41■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Phactr2B1AVP0 632 aa19.41■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 St18Q80TY4 1045 aa19.41■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 G3bp1P97855 465 aaKnown RBP19.4■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 Casq1O09165 405 aa19.4■□□□□ 0.7
Gtf3c4-204ENSMUST00000171404 CntlnA2AM05 1397 aa19.39■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Nutm1Q8BHP2 1126 aa19.39■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Cspp1B2RX88 1205 aa19.38■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Tpm1P58771 284 aa19.38■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Fmn1Q05860 1466 aa19.38■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Hmox1P14901 289 aa19.38■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Nectin2P32507 530 aa19.38■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 VgfQ0VGU4 617 aa19.38■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Sh3bgrQ9WUZ7 214 aa19.38■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Ipo4Q8VI75 1082 aa19.38■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 GsdmaQ9EST1 446 aa19.37■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 AcrbpQ3V140 540 aa19.37■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Ddx11Q6AXC6 880 aa19.37■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Rec8Q8C5S7 591 aa19.37■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Hnrnpul1Q8VDM6 859 aaKnown RBP19.37■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Sart1Q9Z315 806 aaKnown RBP19.36■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Bicd2Q921C5 820 aa19.36■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Kif7B7ZNG0 1348 aa19.36■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Usp47Q8BY87 1376 aa19.36■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Chmp7Q8R1T1 451 aa19.35■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Ccdc96Q9CR92 584 aa19.35■□□□□ 0.69
Gtf3c4-204ENSMUST00000171404 Pabpn1Q8CCS6 302 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 58.1 ms