RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Plekhh2Q8C115 1491 aa21.58■■□□□ 1.05
Ebf3-204ENSMUST00000169486 Calcoco2A2A6M5 331 aa21.58■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Becn1O88597 448 aa21.58■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Rock1P70335 1354 aa21.57■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Pibf1E9Q6K3 756 aa21.57■■□□□ 1.04
Ebf3-204ENSMUST00000169486 CrebrfQ8CDG5 640 aaKnown RBP21.57■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Ylpm1Q9R0I7 1386 aaKnown RBP21.57■■□□□ 1.04
Ebf3-204ENSMUST00000169486 MecomP14404 1042 aa21.56■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Arid3cA6PWV5 409 aa21.56■■□□□ 1.04
Ebf3-204ENSMUST00000169486 RdxP26043 583 aaKnown RBP21.55■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Fan1Q69ZT1 1020 aa21.55■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Pak3Q61036 559 aa21.54■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Iqgap2Q3UQ44 1575 aa21.54■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Rfx1P48377 963 aa21.54■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Tsen2Q6P7W5 460 aa21.54■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Pde3bQ61409 1100 aa21.53■■□□□ 1.04
Ebf3-204ENSMUST00000169486 UacaQ8CGB3 1411 aa21.53■■□□□ 1.04
Ebf3-204ENSMUST00000169486 Trim30aP15533 496 aa21.51■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Ush1cQ9ES64 910 aa21.51■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Ccdc60Q8C4J0 545 aa21.51■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Kif3bQ61771 747 aa21.5■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Dhx29Q6PGC1 1365 aaKnown RBP21.5■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Ppp1r18Q8BQ30 594 aa21.5■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Plcd4Q8K3R3 807 aa21.5■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Brpf1B2RRD7 1212 aa21.5■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Pknox2Q8BG99 474 aa21.5■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Atp6v1dP57746 247 aa21.49■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Lemd3Q9WU40 921 aa21.49■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Smarce1O54941 411 aaKnown RBP21.48■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Dhx57Q6P5D3 1388 aaKnown RBP21.48■■□□□ 1.03
Ebf3-204ENSMUST00000169486 R3hcc1Q8BSI6 488 aa21.47■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Rpgrip1lQ8CG73 1264 aa21.47■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Dapk1Q80YE7 1442 aa21.46■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Cald1E9QA15 768 aaKnown RBP21.46■■□□□ 1.03
Ebf3-204ENSMUST00000169486 Fam184bQ0KK56 942 aa21.45■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Eif4g2Q62448 906 aaKnown RBP21.45■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Spag9Q58A65 1321 aaKnown RBP21.45■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Sart1Q9Z315 806 aaKnown RBP21.44■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Prkrip1Q9CWV6 186 aaKnown RBP21.44■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Kif7B7ZNG0 1348 aa21.44■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Ttll13A4Q9F6 804 aa21.43■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Zscan10Q3URR7 782 aa21.43■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Ralbp1Q62172 648 aa21.43■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Cgnl1Q6AW69 1298 aa21.43■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Cspp1B2RX88 1205 aa21.41■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Casq1O09165 405 aa21.41■■□□□ 1.02
Ebf3-204ENSMUST00000169486 GsdmaQ9EST1 446 aa21.41■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Trim58Q5NCC9 485 aa21.41■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Stard8Q8K031 1019 aa21.41■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Sf3a1Q8K4Z5 791 aaKnown RBP21.41■■□□□ 1.02
Ebf3-204ENSMUST00000169486 MyclP10166 368 aa21.4■■□□□ 1.02
Ebf3-204ENSMUST00000169486 Slc4a2P13808 1237 aaKnown RBP21.4■■□□□ 1.02
Ebf3-204ENSMUST00000169486 G3bp1P97855 465 aaKnown RBP21.4■■□□□ 1.02
Ebf3-204ENSMUST00000169486 KarsQ99MN1 595 aaKnown RBP21.4■■□□□ 1.02
Ebf3-204ENSMUST00000169486 St18Q80TY4 1045 aa21.38■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Rabep1O35551 862 aa21.38■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Filip1lQ6P6L0 1131 aa21.38■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Sox12Q04890 314 aa21.37■■□□□ 1.01
Ebf3-204ENSMUST00000169486 IbspQ61711 324 aa21.37■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Fbxo2Q80UW2 297 aa21.37■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Ccdc30Q8BVF4 654 aa21.37■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Ccdc183A2AJB1 534 aa21.35■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Kif16bB1AVY7 1312 aa21.35■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Pank1Q8K4K6 548 aa21.35■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Cc2d1aQ8K1A6 943 aa21.34■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Usp40Q8BWR4 1235 aa21.34■■□□□ 1.01
Ebf3-204ENSMUST00000169486 CenpjQ569L8 1344 aa21.33■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Ankrd36D3Z4K0 1415 aa21.33■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Ccer1Q9CQL2 403 aa21.33■■□□□ 1.01
Ebf3-204ENSMUST00000169486 Tpm3-rs7D3Z2H9 248 aa21.32■■□□□ 1
Ebf3-204ENSMUST00000169486 Slc4a10Q5DTL9 1118 aa21.32■■□□□ 1
Ebf3-204ENSMUST00000169486 Utp14aQ640M1 767 aaKnown RBP21.32■■□□□ 1
Ebf3-204ENSMUST00000169486 Glipr1l2Q9CQ35 332 aa21.31■■□□□ 1
Ebf3-204ENSMUST00000169486 Mical1Q8VDP3 1048 aa21.3■■□□□ 1
Ebf3-204ENSMUST00000169486 PnisrA2AJT4 805 aaKnown RBP21.3■■□□□ 1
Ebf3-204ENSMUST00000169486 Psme1P97371 249 aa21.3■■□□□ 1
Ebf3-204ENSMUST00000169486 Stk31Q99MW1 1018 aa21.29■■□□□ 1
Ebf3-204ENSMUST00000169486 Utp3Q9JI13 469 aaKnown RBP21.29■■□□□ 1
Ebf3-204ENSMUST00000169486 Nol10Q5RJG1 687 aaKnown RBP21.29■■□□□ 1
Ebf3-204ENSMUST00000169486 Pdcl3Q8BVF2 240 aa21.29■■□□□ 1
Ebf3-204ENSMUST00000169486 Txndc2Q6P902 515 aa21.29■■□□□ 1
Ebf3-204ENSMUST00000169486 Q7TT23 1179 aa21.29■■□□□ 1
Ebf3-204ENSMUST00000169486 Sh3bgrQ9WUZ7 214 aa21.28■■□□□ 1
Ebf3-204ENSMUST00000169486 Chmp3Q9CQ10 224 aa21.28■■□□□ 1
Ebf3-204ENSMUST00000169486 Triml2E9PW10 424 aa21.27■■□□□ 1
Ebf3-204ENSMUST00000169486 Washc2Q6PGL7 1334 aa21.27■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Atl3Q91YH5 541 aa21.26■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Samd1D3YXK1 519 aa21.26■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Nap1l3Q794H2 544 aa21.25■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Zfp444Q3TDV8 331 aaKnown RBP21.25■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Gripap1Q8VD04 806 aa21.25■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Tomm22Q9CPQ3 142 aa21.25■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Efcab5A0JP43 1406 aa21.25■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Phactr2B1AVP0 632 aa21.25■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Kcnh8P59111 1102 aa21.25■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Chmp4cQ9D7F7 232 aa21.24■□□□□ 0.99
Ebf3-204ENSMUST00000169486 WrnO09053 1401 aa21.24■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Polr3gQ6NXY9 223 aa21.24■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Zfp644E9QA22 1323 aa21.23■□□□□ 0.99
Ebf3-204ENSMUST00000169486 Kif4P33174 1231 aa21.22■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 9.5 ms