RNA–Protein interactions for RNA: ENSMUST00000160422.7

Cpsf4-202, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Cpsf4, Length 1,756 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-202ENSMUST00000160422 Trak1Q6PD31 939 aa28.7■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 Pik3c2gO70167 1506 aa28.69■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 Naip5Q9R016 1403 aa28.68■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 Ptch1Q61115 1434 aa28.67■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 ShprhQ7TPQ3 1674 aa28.67■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 Dhx9O70133 1380 aaKnown RBP28.65■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 Pde4cQ3UEI1 686 aa28.65■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 DroshaQ5HZJ0 1373 aaKnown RBP28.64■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 Synj2Q9D2G5 1434 aa28.64■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 Dip2cE9PWR4 1557 aa28.64■■■□□ 2.18
Cpsf4-202ENSMUST00000160422 Dnajc5gQ8C632 165 aa28.63■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 Hecw2Q6I6G8 1578 aa28.63■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 RereQ80TZ9 1558 aa28.63■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 Usp47Q8BY87 1376 aa28.62■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 Topbp1Q6ZQF0 1515 aa28.62■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 Cdc42bpgQ80UW5 1551 aa28.62■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 Plch2A2AP18 1501 aa28.6■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 Cul9Q80TT8 1865 aa28.6■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 Pcgf6Q99NA9 353 aa28.6■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 Cd109Q8R422 1442 aa28.59■■■□□ 2.17
Cpsf4-202ENSMUST00000160422 Kif1bQ60575 1816 aaKnown RBP28.57■■■□□ 2.16
Cpsf4-202ENSMUST00000160422 Plppr3Q7TPB0 716 aa28.57■■■□□ 2.16
Cpsf4-202ENSMUST00000160422 Kif3bQ61771 747 aa28.56■■■□□ 2.16
Cpsf4-202ENSMUST00000160422 Zbtb7cQ8VCZ7 619 aa28.55■■■□□ 2.16
Cpsf4-202ENSMUST00000160422 Camsap2Q8C1B1 1461 aa28.55■■■□□ 2.16
Cpsf4-202ENSMUST00000160422 Kif14L0N7N1 1674 aaKnown RBP28.54■■■□□ 2.16
Cpsf4-202ENSMUST00000160422 Uggt2E9Q4X2 1504 aa28.53■■■□□ 2.16
Cpsf4-202ENSMUST00000160422 Myom3A2ABU4 1439 aa28.52■■■□□ 2.16
Cpsf4-202ENSMUST00000160422 Naip6Q9JIB6 1403 aa28.52■■■□□ 2.16
Cpsf4-202ENSMUST00000160422 Atp7aQ64430 1491 aa28.51■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Myo5cE9Q1F5 1742 aa28.51■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Gli2Q0VGT2 1544 aa28.51■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Yeats2Q3TUF7 1407 aa28.5■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Nsd2Q8BVE8 1365 aa28.5■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Qser1A2BIE1 1698 aa28.49■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Aebp2Q9Z248 504 aaKnown RBP28.48■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Dot1lQ6XZL8 1540 aa28.47■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Ylpm1Q9R0I7 1386 aaKnown RBP28.47■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Tmem131lQ3U3D7 1597 aa28.46■■■□□ 2.15
Cpsf4-202ENSMUST00000160422 Trpm1Q2TV84 1622 aa28.45■■■□□ 2.14
Cpsf4-202ENSMUST00000160422 Hnrnpul2Q00PI9 745 aaKnown RBP28.45■■■□□ 2.14
Cpsf4-202ENSMUST00000160422 Alpk3Q924C5 1678 aa28.44■■■□□ 2.14
Cpsf4-202ENSMUST00000160422 Rock1P70335 1354 aa28.43■■■□□ 2.14
Cpsf4-202ENSMUST00000160422 Ppip5k1A2ARP1 1436 aa28.43■■■□□ 2.14
Cpsf4-202ENSMUST00000160422 AnkarA2RT91 1465 aa28.41■■■□□ 2.14
Cpsf4-202ENSMUST00000160422 Abca6Q8K441 1624 aa28.41■■■□□ 2.14
Cpsf4-202ENSMUST00000160422 Zmym4A2A791 1549 aaKnown RBP28.39■■■□□ 2.14
Cpsf4-202ENSMUST00000160422 Edc4Q3UJB9 1406 aaKnown RBP28.39■■■□□ 2.13
Cpsf4-202ENSMUST00000160422 Tarbp1E9Q368 1579 aa28.38■■■□□ 2.13
Cpsf4-202ENSMUST00000160422 Prex1Q69ZK0 1650 aa28.36■■■□□ 2.13
Cpsf4-202ENSMUST00000160422 Ttc21bQ0HA38 1315 aa28.35■■■□□ 2.13
Cpsf4-202ENSMUST00000160422 Ppargc1bQ8VHJ7 1014 aa28.34■■■□□ 2.13
Cpsf4-202ENSMUST00000160422 Hdac5Q9Z2V6 1113 aa28.32■■■□□ 2.12
Cpsf4-202ENSMUST00000160422 Mbd5B1AYB6 1498 aa28.31■■■□□ 2.12
Cpsf4-202ENSMUST00000160422 Supt5hO55201 1082 aaKnown RBP28.31■■■□□ 2.12
Cpsf4-202ENSMUST00000160422 Rgl3Q3UYI5 709 aa28.29■■■□□ 2.12
Cpsf4-202ENSMUST00000160422 Cfap65Q3V0B4 1847 aa28.28■■■□□ 2.12
Cpsf4-202ENSMUST00000160422 NpatQ8BMA5 1420 aa28.27■■■□□ 2.12
Cpsf4-202ENSMUST00000160422 Wdr66E9Q743 1299 aa28.27■■■□□ 2.12
Cpsf4-202ENSMUST00000160422 Washc2Q6PGL7 1334 aa28.26■■■□□ 2.12
Cpsf4-202ENSMUST00000160422 Adamtsl3G3UXC7 1706 aa28.24■■■□□ 2.11
Cpsf4-202ENSMUST00000160422 ClspnQ80YR7 1315 aa28.24■■■□□ 2.11
Cpsf4-202ENSMUST00000160422 Gm13697A2AK42 830 aa28.22■■■□□ 2.11
Cpsf4-202ENSMUST00000160422 Sall2Q9QX96 1004 aa28.22■■■□□ 2.11
Cpsf4-202ENSMUST00000160422 Iqgap3F8VQ29 1632 aa28.21■■■□□ 2.11
Cpsf4-202ENSMUST00000160422 Tecpr2Q3UH45 1423 aa28.21■■■□□ 2.11
Cpsf4-202ENSMUST00000160422 Cpsf1Q9EPU4 1441 aaKnown RBP28.21■■■□□ 2.11
Cpsf4-202ENSMUST00000160422 Adamts7Q68SA9 1657 aa28.2■■■□□ 2.11
Cpsf4-202ENSMUST00000160422 Iqgap1Q9JKF1 1657 aaKnown RBP28.19■■■□□ 2.1
Cpsf4-202ENSMUST00000160422 Akap12Q9WTQ5 1684 aa28.19■■■□□ 2.1
Cpsf4-202ENSMUST00000160422 Mug2P28666 1451 aa28.18■■■□□ 2.1
Cpsf4-202ENSMUST00000160422 Polr3aB2RXC6 1390 aa28.17■■■□□ 2.1
Cpsf4-202ENSMUST00000160422 Adamts13Q769J6 1426 aa28.16■■■□□ 2.1
Cpsf4-202ENSMUST00000160422 Neurod1Q60867 357 aa28.15■■■□□ 2.1
Cpsf4-202ENSMUST00000160422 Talpid3E9PV87 1520 aa28.15■■■□□ 2.1
Cpsf4-202ENSMUST00000160422 Rsph4aQ8BYM7 716 aa28.14■■■□□ 2.09
Cpsf4-202ENSMUST00000160422 Abca8aQ8K442 1620 aa28.13■■■□□ 2.09
Cpsf4-202ENSMUST00000160422 Ino80Q6ZPV2 1559 aa28.13■■■□□ 2.09
Cpsf4-202ENSMUST00000160422 MlecQ6ZQI3 291 aaKnown RBP28.11■■■□□ 2.09
Cpsf4-202ENSMUST00000160422 Abcc6Q9R1S7 1498 aa28.1■■■□□ 2.09
Cpsf4-202ENSMUST00000160422 ErbinQ80TH2 1402 aa28.09■■■□□ 2.09
Cpsf4-202ENSMUST00000160422 Adgrb3Q80ZF8 1522 aa28.08■■■□□ 2.09
Cpsf4-202ENSMUST00000160422 Dapk1Q80YE7 1442 aa28.07■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Erich6D3Z6S9 713 aa28.07■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Myom2Q14BI5 1463 aa28.07■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Efcab6Q6P1E8 1516 aa28.06■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Tulp4Q9JIL5 1547 aa28.06■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Cdk13Q69ZA1 1511 aaKnown RBP28.06■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Sall3Q62255 1320 aa28.06■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Arhgap23Q69ZH9 1483 aa28.05■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Mroh3A0A1D5RM54 893 aa28.05■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Afap1Q80YS6 731 aa28.05■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Grwd1Q810D6 446 aaKnown RBP28.04■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 AatkQ80YE4 1365 aa28.03■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Knl1Q66JQ7 1612 aa28.03■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 Hfm1D3Z4R1 1434 aa28.02■■■□□ 2.08
Cpsf4-202ENSMUST00000160422 RalgapbQ8BQZ4 1484 aa28.01■■■□□ 2.07
Cpsf4-202ENSMUST00000160422 Uggt1Q6P5E4 1551 aa28■■■□□ 2.07
Cpsf4-202ENSMUST00000160422 Prdm2A2A7B5 1709 aaKnown RBP27.99■■■□□ 2.07
Cpsf4-202ENSMUST00000160422 Ehbp1l1Q99MS7 1716 aa27.98■■■□□ 2.07
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms