RNA–Protein interactions for RNA: ENSMUST00000160422.7

Cpsf4-202, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Cpsf4, Length 1,756 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-202ENSMUST00000160422 Gm35339A0A140LHH9 1649 aa42.08■■■■■ 4.33
Cpsf4-202ENSMUST00000160422 NischQ80TM9 1593 aa42■■■■■ 4.31
Cpsf4-202ENSMUST00000160422 Abcc9P70170 1546 aa40.81■■■■■ 4.12
Cpsf4-202ENSMUST00000160422 Abcc8B2RUS7 1588 aa40.32■■■■■ 4.05
Cpsf4-202ENSMUST00000160422 ScribQ80U72 1612 aa38.23■■■■□ 3.71
Cpsf4-202ENSMUST00000160422 Dcaf1Q80TR8 1506 aa37.51■■■■□ 3.6
Cpsf4-202ENSMUST00000160422 Rhox8Q6VSS7 320 aa37.28■■■■□ 3.56
Cpsf4-202ENSMUST00000160422 Kdm5dQ62240 1548 aa37.17■■■■□ 3.54
Cpsf4-202ENSMUST00000160422 NacadQ5SWP3 1504 aa37.11■■■■□ 3.53
Cpsf4-202ENSMUST00000160422 Rb1cc1Q9ESK9 1588 aa36.67■■■■□ 3.46
Cpsf4-202ENSMUST00000160422 Ccdc180J3QNE4 1664 aa36.42■■■■□ 3.42
Cpsf4-202ENSMUST00000160422 Sycp2Q9CUU3 1500 aa36.36■■■■□ 3.41
Cpsf4-202ENSMUST00000160422 Baz1aO88379 1555 aa36.28■■■■□ 3.4
Cpsf4-202ENSMUST00000160422 Crybg2B7ZCC2 1516 aa36.03■■■■□ 3.36
Cpsf4-202ENSMUST00000160422 Rtl1Q7M732 1744 aa35.9■■■■□ 3.34
Cpsf4-202ENSMUST00000160422 BicraF8VPZ9 1578 aa35.73■■■■□ 3.31
Cpsf4-202ENSMUST00000160422 Zcchc6Q5BLK4 1491 aaKnown RBP35.48■■■■□ 3.27
Cpsf4-202ENSMUST00000160422 Smarca2Q6DIC0 1577 aa35.36■■■■□ 3.25
Cpsf4-202ENSMUST00000160422 Cecr2E9Q2Z1 1453 aa34.76■■■■□ 3.16
Cpsf4-202ENSMUST00000160422 Ccdc136Q3TVA9 1136 aa34.73■■■■□ 3.15
Cpsf4-202ENSMUST00000160422 Pds5bQ4VA53 1446 aaKnown RBP34.52■■■■□ 3.12
Cpsf4-202ENSMUST00000160422 Smarca4Q3TKT4 1613 aaKnown RBP34.47■■■■□ 3.11
Cpsf4-202ENSMUST00000160422 Brd4Q9ESU6 1400 aaKnown RBP34.4■■■■□ 3.1
Cpsf4-202ENSMUST00000160422 Atad2bE9Q166 1460 aaKnown RBP34.33■■■■□ 3.09
Cpsf4-202ENSMUST00000160422 Trim41Q5NCC3 630 aa34.31■■■■□ 3.08
Cpsf4-202ENSMUST00000160422 Thoc2B1AZI6 1594 aaKnown RBP34.24■■■■□ 3.07
Cpsf4-202ENSMUST00000160422 Dnajc5bQ9CQ94 199 aa34.22■■■■□ 3.07
Cpsf4-202ENSMUST00000160422 Synj1Q8CHC4 1574 aa34.21■■■■□ 3.07
Cpsf4-202ENSMUST00000160422 CftrP26361 1476 aa34.21■■■■□ 3.07
Cpsf4-202ENSMUST00000160422 Iqgap2Q3UQ44 1575 aa34.11■■■■□ 3.05
Cpsf4-202ENSMUST00000160422 Cttnbp2B9EJA2 1648 aa34.07■■■■□ 3.04
Cpsf4-202ENSMUST00000160422 Ercc6F8VPZ5 1481 aa33.86■■■■□ 3.01
Cpsf4-202ENSMUST00000160422 Cc2d2aQ8CFW7 1633 aa33.71■■■□□ 2.99
Cpsf4-202ENSMUST00000160422 Wdr62Q3U3T8 1523 aa33.67■■■□□ 2.98
Cpsf4-202ENSMUST00000160422 Frmpd1A2AKB4 1549 aa33.63■■■□□ 2.97
Cpsf4-202ENSMUST00000160422 Golga3P55937 1487 aa33.62■■■□□ 2.97
Cpsf4-202ENSMUST00000160422 HrcG5E8J6 738 aa33.55■■■□□ 2.96
Cpsf4-202ENSMUST00000160422 Esf1Q3V1V3 845 aaKnown RBP33.51■■■□□ 2.95
Cpsf4-202ENSMUST00000160422 Fam135aQ6NS59 1506 aa33.5■■■□□ 2.95
Cpsf4-202ENSMUST00000160422 Top2bQ64511 1612 aa33.44■■■□□ 2.94
Cpsf4-202ENSMUST00000160422 Cngb1E1AZ71 1325 aa33.33■■■□□ 2.93
Cpsf4-202ENSMUST00000160422 Unc13aQ4KUS2 1712 aa33.31■■■□□ 2.92
Cpsf4-202ENSMUST00000160422 Phldb1Q6PDH0 1371 aaKnown RBP33.22■■■□□ 2.91
Cpsf4-202ENSMUST00000160422 Rsf1E9PWW9 1441 aaKnown RBP33.09■■■□□ 2.89
Cpsf4-202ENSMUST00000160422 Ccdc88bQ4QRL3 1481 aa33.03■■■□□ 2.88
Cpsf4-202ENSMUST00000160422 Fmn1Q05860 1466 aa33.01■■■□□ 2.87
Cpsf4-202ENSMUST00000160422 Cep164Q5DU05 1446 aa32.97■■■□□ 2.87
Cpsf4-202ENSMUST00000160422 Baz1bQ9Z277 1479 aa32.95■■■□□ 2.86
Cpsf4-202ENSMUST00000160422 Lamc3Q9R0B6 1581 aa32.92■■■□□ 2.86
Cpsf4-202ENSMUST00000160422 TnnQ80Z71 1560 aa32.92■■■□□ 2.86
Cpsf4-202ENSMUST00000160422 Chic1Q8CBW7 227 aa32.91■■■□□ 2.86
Cpsf4-202ENSMUST00000160422 Ubl4bQ9CQ84 188 aa32.89■■■□□ 2.86
Cpsf4-202ENSMUST00000160422 Kif15Q6P9L6 1387 aa32.76■■■□□ 2.84
Cpsf4-202ENSMUST00000160422 Mrc2Q64449 1479 aa32.68■■■□□ 2.82
Cpsf4-202ENSMUST00000160422 Top2aQ01320 1528 aaKnown RBP32.62■■■□□ 2.81
Cpsf4-202ENSMUST00000160422 Cux2P70298 1426 aa32.49■■■□□ 2.79
Cpsf4-202ENSMUST00000160422 Camsap1A2AHC3 1581 aa32.44■■■□□ 2.78
Cpsf4-202ENSMUST00000160422 Ccdc18Q640L5 1455 aa32.36■■■□□ 2.77
Cpsf4-202ENSMUST00000160422 Gab3Q8BSM5 595 aa32.19■■■□□ 2.74
Cpsf4-202ENSMUST00000160422 Kif21aQ9QXL2 1672 aa32.17■■■□□ 2.74
Cpsf4-202ENSMUST00000160422 Npm1Q61937 292 aaKnown RBP32.17■■■□□ 2.74
Cpsf4-202ENSMUST00000160422 Il27Q8K3I6 234 aa32.15■■■□□ 2.74
Cpsf4-202ENSMUST00000160422 Rapgef2Q8CHG7 1496 aa32.14■■■□□ 2.74
Cpsf4-202ENSMUST00000160422 Grin2bQ01097 1482 aa32.13■■■□□ 2.73
Cpsf4-202ENSMUST00000160422 NrkQ9R0G8 1455 aa32.09■■■□□ 2.73
Cpsf4-202ENSMUST00000160422 LrpprcQ6PB66 1392 aaKnown RBP32.07■■■□□ 2.72
Cpsf4-202ENSMUST00000160422 Lrriq1Q0P5X1 1673 aa32.05■■■□□ 2.72
Cpsf4-202ENSMUST00000160422 PogzQ8BZH4 1409 aaKnown RBP31.99■■■□□ 2.71
Cpsf4-202ENSMUST00000160422 PtprkP35822 1457 aa31.98■■■□□ 2.71
Cpsf4-202ENSMUST00000160422 Shroom4Q1W617 1475 aa31.97■■■□□ 2.71
Cpsf4-202ENSMUST00000160422 Dhx29Q6PGC1 1365 aaKnown RBP31.9■■■□□ 2.7
Cpsf4-202ENSMUST00000160422 Efcab5A0JP43 1406 aa31.88■■■□□ 2.69
Cpsf4-202ENSMUST00000160422 Cep162Q6ZQ06 1403 aa31.87■■■□□ 2.69
Cpsf4-202ENSMUST00000160422 Eif4g1Q6NZJ6 1600 aaKnown RBP31.85■■■□□ 2.69
Cpsf4-202ENSMUST00000160422 Duox2A2AQ99 1517 aa31.85■■■□□ 2.69
Cpsf4-202ENSMUST00000160422 Npm2Q80W85 207 aa31.74■■■□□ 2.67
Cpsf4-202ENSMUST00000160422 Crocc2F6XLV1 1638 aa31.72■■■□□ 2.67
Cpsf4-202ENSMUST00000160422 Arhgap35Q91YM2 1499 aa31.7■■■□□ 2.67
Cpsf4-202ENSMUST00000160422 Map3k1P53349 1493 aa31.65■■■□□ 2.66
Cpsf4-202ENSMUST00000160422 Samd9lQ69Z37 1561 aa31.61■■■□□ 2.65
Cpsf4-202ENSMUST00000160422 Mroh2bQ7M6Y6 1581 aa31.61■■■□□ 2.65
Cpsf4-202ENSMUST00000160422 Urb2E9Q7L1 1524 aaKnown RBP31.61■■■□□ 2.65
Cpsf4-202ENSMUST00000160422 Plb1Q3TTY0 1478 aa31.57■■■□□ 2.64
Cpsf4-202ENSMUST00000160422 Eif4g3Q80XI3 1579 aaKnown RBP31.57■■■□□ 2.64
Cpsf4-202ENSMUST00000160422 AqrQ8CFQ3 1481 aaKnown RBP31.45■■■□□ 2.63
Cpsf4-202ENSMUST00000160422 SynmQ70IV5 1561 aa31.44■■■□□ 2.62
Cpsf4-202ENSMUST00000160422 Myt1lP97500 1187 aa31.38■■■□□ 2.61
Cpsf4-202ENSMUST00000160422 Ift140E9PY46 1464 aa31.37■■■□□ 2.61
Cpsf4-202ENSMUST00000160422 Rad54l2Q99NG0 1466 aa31.36■■■□□ 2.61
Cpsf4-202ENSMUST00000160422 Disp1Q3TDN0 1521 aa31.36■■■□□ 2.61
Cpsf4-202ENSMUST00000160422 Clip1Q922J3 1391 aa31.35■■■□□ 2.61
Cpsf4-202ENSMUST00000160422 Zeb1Q64318 1117 aa31.33■■■□□ 2.61
Cpsf4-202ENSMUST00000160422 Carmil1Q6EDY6 1374 aa31.33■■■□□ 2.61
Cpsf4-202ENSMUST00000160422 Magi3Q9EQJ9 1476 aa31.29■■■□□ 2.6
Cpsf4-202ENSMUST00000160422 Pla2r1Q62028 1487 aa31.23■■■□□ 2.59
Cpsf4-202ENSMUST00000160422 Gpatch8A2A6A1 1505 aa31.22■■■□□ 2.59
Cpsf4-202ENSMUST00000160422 Nup160Q9Z0W3 1402 aaKnown RBP31.21■■■□□ 2.59
Cpsf4-202ENSMUST00000160422 Grin2aP35436 1464 aa31.21■■■□□ 2.59
Cpsf4-202ENSMUST00000160422 Pbrm1Q8BSQ9 1634 aaKnown RBP31.19■■■□□ 2.58
Cpsf4-202ENSMUST00000160422 Rusc2Q80U22 1514 aa31.16■■■□□ 2.58
Retrieved 100 of 22,080 RNA–protein pairs in 7.9 ms