RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Scaf11E9PZM7 1456 aaKnown RBP28,63■■■□□ 2,17
Sqstm1-205ENSMUST00000143379 Kif7B7ZNG0 1348 aa28,63■■■□□ 2,17
Sqstm1-205ENSMUST00000143379 Arhgap23Q69ZH9 1483 aa28,59■■■□□ 2,17
Sqstm1-205ENSMUST00000143379 Xrn1P97789 1719 aaKnown RBP28,59■■■□□ 2,17
Sqstm1-205ENSMUST00000143379 Rapgef3Q8VCC8 918 aa28,58■■■□□ 2,17
Sqstm1-205ENSMUST00000143379 Bcl11bQ99PV8 884 aa28,57■■■□□ 2,16
Sqstm1-205ENSMUST00000143379 GphnQ8BUV3 769 aaKnown RBP28,56■■■□□ 2,16
Sqstm1-205ENSMUST00000143379 Rims2Q9EQZ7 1530 aa28,53■■■□□ 2,16
Sqstm1-205ENSMUST00000143379 Znf518aB2RRF6 1478 aaKnown RBP28,5■■■□□ 2,15
Sqstm1-205ENSMUST00000143379 PzpQ61838 1495 aa28,49■■■□□ 2,15
Sqstm1-205ENSMUST00000143379 Gm13697A2AK42 830 aa28,49■■■□□ 2,15
Sqstm1-205ENSMUST00000143379 Naip5Q9R016 1403 aa28,49■■■□□ 2,15
Sqstm1-205ENSMUST00000143379 Zc3h13E9Q784 1729 aaKnown RBP28,46■■■□□ 2,15
Sqstm1-205ENSMUST00000143379 Uggt2E9Q4X2 1504 aa28,44■■■□□ 2,14
Sqstm1-205ENSMUST00000143379 Naip1Q9QWK5 1403 aa28,43■■■□□ 2,14
Sqstm1-205ENSMUST00000143379 Kif3bQ61771 747 aa28,42■■■□□ 2,14
Sqstm1-205ENSMUST00000143379 Ccnb3Q810T2 1396 aa28,41■■■□□ 2,14
Sqstm1-205ENSMUST00000143379 Abcc6Q9R1S7 1498 aa28,4■■■□□ 2,14
Sqstm1-205ENSMUST00000143379 DroshaQ5HZJ0 1373 aaKnown RBP28,39■■■□□ 2,14
Sqstm1-205ENSMUST00000143379 Topbp1Q6ZQF0 1515 aa28,37■■■□□ 2,13
Sqstm1-205ENSMUST00000143379 Lmtk2Q3TYD6 1471 aa28,36■■■□□ 2,13
Sqstm1-205ENSMUST00000143379 Tubgcp6G5E8P0 1769 aa28,35■■■□□ 2,13
Sqstm1-205ENSMUST00000143379 Rrp7aQ9D1C9 280 aaKnown RBP28,35■■■□□ 2,13
Sqstm1-205ENSMUST00000143379 Fmn2Q9JL04 1578 aa28,34■■■□□ 2,13
Sqstm1-205ENSMUST00000143379 Iqgap1Q9JKF1 1657 aaKnown RBP28,29■■■□□ 2,12
Sqstm1-205ENSMUST00000143379 Rsph4aQ8BYM7 716 aa28,28■■■□□ 2,12
Sqstm1-205ENSMUST00000143379 Adgrb2Q8CGM1 1561 aa28,27■■■□□ 2,12
Sqstm1-205ENSMUST00000143379 Plch2A2AP18 1501 aa28,26■■■□□ 2,11
Sqstm1-205ENSMUST00000143379 Nrxn3Q6P9K9 1571 aa28,24■■■□□ 2,11
Sqstm1-205ENSMUST00000143379 Cdk11bP24788 784 aaKnown RBP28,23■■■□□ 2,11
Sqstm1-205ENSMUST00000143379 Fbln2P37889 1221 aa28,23■■■□□ 2,11
Sqstm1-205ENSMUST00000143379 Hfm1D3Z4R1 1434 aa28,22■■■□□ 2,11
Sqstm1-205ENSMUST00000143379 Chd2E9PZM4 1827 aaKnown RBP28,21■■■□□ 2,11
Sqstm1-205ENSMUST00000143379 Prdm16A2A935 1275 aa28,21■■■□□ 2,11
Sqstm1-205ENSMUST00000143379 Asxl1P59598 1514 aa28,2■■■□□ 2,1
Sqstm1-205ENSMUST00000143379 Mast1Q9R1L5 1570 aa28,2■■■□□ 2,1
Sqstm1-205ENSMUST00000143379 Arid4bA2CG63 1314 aaKnown RBP28,18■■■□□ 2,1
Sqstm1-205ENSMUST00000143379 Abca17E9PX95 1733 aa28,17■■■□□ 2,1
Sqstm1-205ENSMUST00000143379 Amigo3Q8C2S7 508 aa28,16■■■□□ 2,1
Sqstm1-205ENSMUST00000143379 Robo2Q7TPD3 1470 aa28,15■■■□□ 2,1
Sqstm1-205ENSMUST00000143379 Zbtb7cQ8VCZ7 619 aa28,13■■■□□ 2,09
Sqstm1-205ENSMUST00000143379 DnmbpQ6TXD4 1580 aa28,11■■■□□ 2,09
Sqstm1-205ENSMUST00000143379 Usp54Q8BL06 1588 aaKnown RBP28,11■■■□□ 2,09
Sqstm1-205ENSMUST00000143379 Cypt2Q6P924 180 aa28,09■■■□□ 2,09
Sqstm1-205ENSMUST00000143379 Spag9Q58A65 1321 aaKnown RBP28,07■■■□□ 2,08
Sqstm1-205ENSMUST00000143379 Slit2Q9R1B9 1521 aa28,06■■■□□ 2,08
Sqstm1-205ENSMUST00000143379 Prex1Q69ZK0 1650 aa28,06■■■□□ 2,08
Sqstm1-205ENSMUST00000143379 Nyap1Q6PFX7 833 aa28,05■■■□□ 2,08
Sqstm1-205ENSMUST00000143379 Myo5cE9Q1F5 1742 aa28,04■■■□□ 2,08
Sqstm1-205ENSMUST00000143379 Adamts7Q68SA9 1657 aa28,02■■■□□ 2,08
Sqstm1-205ENSMUST00000143379 Med1Q925J9 1575 aa28,02■■■□□ 2,08
Sqstm1-205ENSMUST00000143379 Cdk13Q69ZA1 1511 aaKnown RBP28,02■■■□□ 2,08
Sqstm1-205ENSMUST00000143379 Abcc5Q9R1X5 1436 aa28,01■■■□□ 2,07
Sqstm1-205ENSMUST00000143379 Tom1O88746 492 aa28■■■□□ 2,07
Sqstm1-205ENSMUST00000143379 Adgrb3Q80ZF8 1522 aa28■■■□□ 2,07
Sqstm1-205ENSMUST00000143379 Mtus2Q3UHD3 1353 aa27,96■■■□□ 2,07
Sqstm1-205ENSMUST00000143379 ShprhQ7TPQ3 1674 aa27,95■■■□□ 2,07
Sqstm1-205ENSMUST00000143379 Ssh2Q5SW75 1423 aa27,93■■■□□ 2,06
Sqstm1-205ENSMUST00000143379 Akap12Q9WTQ5 1684 aa27,93■■■□□ 2,06
Sqstm1-205ENSMUST00000143379 Vps8Q0P5W1 1427 aa27,92■■■□□ 2,06
Sqstm1-205ENSMUST00000143379 Kdm5aQ3UXZ9 1690 aa27,91■■■□□ 2,06
Sqstm1-205ENSMUST00000143379 Mbd5B1AYB6 1498 aa27,91■■■□□ 2,06
Sqstm1-205ENSMUST00000143379 Kif13aQ9EQW7 1749 aa27,88■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Eif2ak4Q9QZ05 1648 aa27,88■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Thsd7aQ69ZU6 1645 aa27,86■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Brinp3Q499E0 766 aa27,86■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Plekhh2Q8C115 1491 aa27,85■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Adgrl2Q8JZZ7 1487 aa27,85■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Setd1aE9PYH6 1716 aa27,85■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Itsn1Q9Z0R4 1714 aa27,84■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Hnrnpul2Q00PI9 745 aaKnown RBP27,84■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Pik3c2aQ61194 1686 aa27,83■■■□□ 2,05
Sqstm1-205ENSMUST00000143379 Cabp1Q9JLK7 227 aa27,81■■■□□ 2,04
Sqstm1-205ENSMUST00000143379 Fhad1A6PWD2 1420 aa27,81■■■□□ 2,04
Sqstm1-205ENSMUST00000143379 Txndc2Q6P902 515 aa27,8■■■□□ 2,04
Sqstm1-205ENSMUST00000143379 Gimap5Q8BWF2 308 aa27,8■■■□□ 2,04
Sqstm1-205ENSMUST00000143379 Col18a1P39061 1774 aa27,8■■■□□ 2,04
Sqstm1-205ENSMUST00000143379 3425401B19RikD3Z1D3 1412 aa27,79■■■□□ 2,04
Sqstm1-205ENSMUST00000143379 Ildr2B5TVM2 661 aa27,79■■■□□ 2,04
Sqstm1-205ENSMUST00000143379 Kif21bQ9QXL1 1668 aa27,78■■■□□ 2,04
Sqstm1-205ENSMUST00000143379 IghaA0A0A6YXW6 389 aa27,76■■■□□ 2,03
Sqstm1-205ENSMUST00000143379 Pde4cQ3UEI1 686 aa27,74■■■□□ 2,03
Sqstm1-205ENSMUST00000143379 Kif1bQ60575 1816 aaKnown RBP27,74■■■□□ 2,03
Sqstm1-205ENSMUST00000143379 Sema6bO54951 886 aa27,71■■■□□ 2,03
Sqstm1-205ENSMUST00000143379 Fnbp4Q6ZQ03 1031 aa27,71■■■□□ 2,03
Sqstm1-205ENSMUST00000143379 Myo3aQ8K3H5 1613 aa27,7■■■□□ 2,03
Sqstm1-205ENSMUST00000143379 Skint5A7XUY5 1461 aa27,7■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Naip7Q9JIB3 1402 aa27,68■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Slc5a4bQ91ZP4 660 aa27,68■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Nhsl1Q8CAF4 1587 aa27,68■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Lamc1P02468 1607 aaKnown RBP27,67■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Tmem131lQ3U3D7 1597 aa27,67■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Chic2Q9D9G3 165 aa27,66■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 NinlQ6ZQ12 1394 aa27,65■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Ttll13A4Q9F6 804 aa27,65■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Zranb1Q7M760 708 aa27,65■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Cntnap1O54991 1385 aa27,64■■■□□ 2,02
Sqstm1-205ENSMUST00000143379 Qtrt2B8ZXI1 415 aa27,62■■■□□ 2,01
Sqstm1-205ENSMUST00000143379 Adgrl1Q80TR1 1466 aa27,62■■■□□ 2,01
Sqstm1-205ENSMUST00000143379 Il16O54824 1322 aa27,62■■■□□ 2,01
Retrieved 100 of 22,080 RNA–protein pairs in 18,1 ms