RNA–Protein interactions for RNA: ENSMUST00000143379.1

Sqstm1-205, Transcript of Sequestosome-1, mousemouse

TSL 5 BASIC

Gene Sqstm1, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1-205ENSMUST00000143379 Gm35339A0A140LHH9 1649 aa42,99■■■■■ 4,47
Sqstm1-205ENSMUST00000143379 NischQ80TM9 1593 aa41,93■■■■■ 4,3
Sqstm1-205ENSMUST00000143379 Abcc9P70170 1546 aa41,34■■■■■ 4,21
Sqstm1-205ENSMUST00000143379 Abcc8B2RUS7 1588 aa40,92■■■■■ 4,14
Sqstm1-205ENSMUST00000143379 ScribQ80U72 1612 aa40,25■■■■■ 4,03
Sqstm1-205ENSMUST00000143379 NacadQ5SWP3 1504 aa38,61■■■■□ 3,77
Sqstm1-205ENSMUST00000143379 Kdm5dQ62240 1548 aa38,58■■■■□ 3,77
Sqstm1-205ENSMUST00000143379 Dnajc5bQ9CQ94 199 aa38,54■■■■□ 3,76
Sqstm1-205ENSMUST00000143379 Sycp2Q9CUU3 1500 aa37,97■■■■□ 3,67
Sqstm1-205ENSMUST00000143379 BicraF8VPZ9 1578 aa37,76■■■■□ 3,64
Sqstm1-205ENSMUST00000143379 Dcaf1Q80TR8 1506 aa37,36■■■■□ 3,57
Sqstm1-205ENSMUST00000143379 Thoc2B1AZI6 1594 aaKnown RBP36,99■■■■□ 3,51
Sqstm1-205ENSMUST00000143379 Pds5bQ4VA53 1446 aaKnown RBP36,69■■■■□ 3,46
Sqstm1-205ENSMUST00000143379 Rb1cc1Q9ESK9 1588 aa36,48■■■■□ 3,43
Sqstm1-205ENSMUST00000143379 Cc2d2aQ8CFW7 1633 aa36,34■■■■□ 3,41
Sqstm1-205ENSMUST00000143379 Atad2bE9Q166 1460 aaKnown RBP36,17■■■■□ 3,38
Sqstm1-205ENSMUST00000143379 Ercc6F8VPZ5 1481 aa35,9■■■■□ 3,34
Sqstm1-205ENSMUST00000143379 Fam135aQ6NS59 1506 aa35,86■■■■□ 3,33
Sqstm1-205ENSMUST00000143379 Baz1aO88379 1555 aa35,82■■■■□ 3,32
Sqstm1-205ENSMUST00000143379 Dnajc5P60904 198 aa35,75■■■■□ 3,31
Sqstm1-205ENSMUST00000143379 Crybg2B7ZCC2 1516 aa35,72■■■■□ 3,31
Sqstm1-205ENSMUST00000143379 Smarca2Q6DIC0 1577 aa35,68■■■■□ 3,3
Sqstm1-205ENSMUST00000143379 Zcchc6Q5BLK4 1491 aaKnown RBP35,55■■■■□ 3,28
Sqstm1-205ENSMUST00000143379 Ccdc180J3QNE4 1664 aa35,49■■■■□ 3,27
Sqstm1-205ENSMUST00000143379 Iqgap2Q3UQ44 1575 aa35,48■■■■□ 3,27
Sqstm1-205ENSMUST00000143379 Smarca4Q3TKT4 1613 aaKnown RBP35,46■■■■□ 3,27
Sqstm1-205ENSMUST00000143379 Wdr62Q3U3T8 1523 aa35,36■■■■□ 3,25
Sqstm1-205ENSMUST00000143379 Frmpd1A2AKB4 1549 aa35,35■■■■□ 3,25
Sqstm1-205ENSMUST00000143379 Phldb1Q6PDH0 1371 aaKnown RBP35,27■■■■□ 3,24
Sqstm1-205ENSMUST00000143379 Trim41Q5NCC3 630 aa35,23■■■■□ 3,23
Sqstm1-205ENSMUST00000143379 Cecr2E9Q2Z1 1453 aa35,21■■■■□ 3,23
Sqstm1-205ENSMUST00000143379 Baz1bQ9Z277 1479 aa35,11■■■■□ 3,21
Sqstm1-205ENSMUST00000143379 Rhox8Q6VSS7 320 aa35,07■■■■□ 3,2
Sqstm1-205ENSMUST00000143379 Ubl4bQ9CQ84 188 aa35,03■■■■□ 3,2
Sqstm1-205ENSMUST00000143379 Mrc2Q64449 1479 aa34,98■■■■□ 3,19
Sqstm1-205ENSMUST00000143379 Unc13aQ4KUS2 1712 aa34,88■■■■□ 3,17
Sqstm1-205ENSMUST00000143379 Lrriq1Q0P5X1 1673 aa34,4■■■■□ 3,1
Sqstm1-205ENSMUST00000143379 Rsf1E9PWW9 1441 aaKnown RBP34,14■■■■□ 3,06
Sqstm1-205ENSMUST00000143379 CftrP26361 1476 aa34,07■■■■□ 3,04
Sqstm1-205ENSMUST00000143379 Shroom2A2ALU4 1481 aa34,03■■■■□ 3,04
Sqstm1-205ENSMUST00000143379 Cttnbp2B9EJA2 1648 aa34,01■■■■□ 3,03
Sqstm1-205ENSMUST00000143379 Kif21aQ9QXL2 1672 aa33,96■■■■□ 3,03
Sqstm1-205ENSMUST00000143379 Synj1Q8CHC4 1574 aa33,94■■■■□ 3,02
Sqstm1-205ENSMUST00000143379 Cux2P70298 1426 aa33,88■■■■□ 3,01
Sqstm1-205ENSMUST00000143379 Col17a1Q07563 1470 aa33,87■■■■□ 3,01
Sqstm1-205ENSMUST00000143379 Eif4g3Q80XI3 1579 aaKnown RBP33,83■■■■□ 3,01
Sqstm1-205ENSMUST00000143379 Kif15Q6P9L6 1387 aa33,64■■■□□ 2,98
Sqstm1-205ENSMUST00000143379 Brd4Q9ESU6 1400 aaKnown RBP33,51■■■□□ 2,95
Sqstm1-205ENSMUST00000143379 Pabpn1Q8CCS6 302 aaKnown RBP33,42■■■□□ 2,94
Sqstm1-205ENSMUST00000143379 Top2bQ64511 1612 aa33,4■■■□□ 2,94
Sqstm1-205ENSMUST00000143379 Urb2E9Q7L1 1524 aaKnown RBP33,38■■■□□ 2,93
Sqstm1-205ENSMUST00000143379 Npm1Q61937 292 aaKnown RBP33,32■■■□□ 2,92
Sqstm1-205ENSMUST00000143379 Lamc3Q9R0B6 1581 aa33,3■■■□□ 2,92
Sqstm1-205ENSMUST00000143379 Esf1Q3V1V3 845 aaKnown RBP33,26■■■□□ 2,91
Sqstm1-205ENSMUST00000143379 Plb1Q3TTY0 1478 aa33,25■■■□□ 2,91
Sqstm1-205ENSMUST00000143379 Pelp1Q9DBD5 1123 aaKnown RBP33,16■■■□□ 2,9
Sqstm1-205ENSMUST00000143379 Cep164Q5DU05 1446 aa33,14■■■□□ 2,9
Sqstm1-205ENSMUST00000143379 Ccdc136Q3TVA9 1136 aa33,13■■■□□ 2,89
Sqstm1-205ENSMUST00000143379 Pcdh10E9PXQ7 1057 aa33,11■■■□□ 2,89
Sqstm1-205ENSMUST00000143379 Dhx29Q6PGC1 1365 aaKnown RBP33,09■■■□□ 2,89
Sqstm1-205ENSMUST00000143379 Zcchc11B2RX14 1644 aaKnown RBP33,08■■■□□ 2,89
Sqstm1-205ENSMUST00000143379 Rtl1Q7M732 1744 aa33,02■■■□□ 2,88
Sqstm1-205ENSMUST00000143379 Rusc2Q80U22 1514 aa32,97■■■□□ 2,87
Sqstm1-205ENSMUST00000143379 Crocc2F6XLV1 1638 aa32,91■■■□□ 2,86
Sqstm1-205ENSMUST00000143379 Il27Q8K3I6 234 aa32,84■■■□□ 2,85
Sqstm1-205ENSMUST00000143379 LrpprcQ6PB66 1392 aaKnown RBP32,79■■■□□ 2,84
Sqstm1-205ENSMUST00000143379 Arhgef5E9Q7D5 1581 aa32,76■■■□□ 2,84
Sqstm1-205ENSMUST00000143379 Ift140E9PY46 1464 aa32,74■■■□□ 2,83
Sqstm1-205ENSMUST00000143379 Ccdc18Q640L5 1455 aa32,69■■■□□ 2,82
Sqstm1-205ENSMUST00000143379 Adgrl3Q80TS3 1537 aa32,64■■■□□ 2,82
Sqstm1-205ENSMUST00000143379 TnnQ80Z71 1560 aa32,62■■■□□ 2,81
Sqstm1-205ENSMUST00000143379 Camsap1A2AHC3 1581 aa32,61■■■□□ 2,81
Sqstm1-205ENSMUST00000143379 PogzQ8BZH4 1409 aaKnown RBP32,54■■■□□ 2,8
Sqstm1-205ENSMUST00000143379 Ttbk1Q6PCN3 1308 aa32,5■■■□□ 2,79
Sqstm1-205ENSMUST00000143379 Disp1Q3TDN0 1521 aa32,48■■■□□ 2,79
Sqstm1-205ENSMUST00000143379 Cep170Q6A065 1588 aa32,42■■■□□ 2,78
Sqstm1-205ENSMUST00000143379 PtprkP35822 1457 aa32,42■■■□□ 2,78
Sqstm1-205ENSMUST00000143379 PtprtQ99M80 1454 aa32,42■■■□□ 2,78
Sqstm1-205ENSMUST00000143379 Setd1bQ8CFT2 1985 aa32,38■■■□□ 2,77
Sqstm1-205ENSMUST00000143379 Gm156Q58A37 223 aa32,38■■■□□ 2,77
Sqstm1-205ENSMUST00000143379 Duox2A2AQ99 1517 aa32,37■■■□□ 2,77
Sqstm1-205ENSMUST00000143379 Nup160Q9Z0W3 1402 aaKnown RBP32,32■■■□□ 2,76
Sqstm1-205ENSMUST00000143379 Gapvd1Q6PAR5 1458 aa32,31■■■□□ 2,76
Sqstm1-205ENSMUST00000143379 Golga3P55937 1487 aa32,28■■■□□ 2,76
Sqstm1-205ENSMUST00000143379 Cc2d2bA0A286YDU8 1405 aa32,24■■■□□ 2,75
Sqstm1-205ENSMUST00000143379 Samd9lQ69Z37 1561 aa32,2■■■□□ 2,75
Sqstm1-205ENSMUST00000143379 Pprc1Q6NZN1 1644 aa32,18■■■□□ 2,74
Sqstm1-205ENSMUST00000143379 Pbrm1Q8BSQ9 1634 aaKnown RBP32,15■■■□□ 2,74
Sqstm1-205ENSMUST00000143379 Fgd6Q69ZL1 1399 aa32,1■■■□□ 2,73
Sqstm1-205ENSMUST00000143379 Grin2bQ01097 1482 aa32,04■■■□□ 2,72
Sqstm1-205ENSMUST00000143379 AqrQ8CFQ3 1481 aaKnown RBP32,02■■■□□ 2,72
Sqstm1-205ENSMUST00000143379 Rad54l2Q99NG0 1466 aa32,01■■■□□ 2,71
Sqstm1-205ENSMUST00000143379 Rapgef2Q8CHG7 1496 aa31,96■■■□□ 2,71
Sqstm1-205ENSMUST00000143379 Abcc1O35379 1528 aa31,95■■■□□ 2,71
Sqstm1-205ENSMUST00000143379 Ythdc2B2RR83 1445 aaKnown RBP31,93■■■□□ 2,7
Sqstm1-205ENSMUST00000143379 Grin2aP35436 1464 aa31,93■■■□□ 2,7
Sqstm1-205ENSMUST00000143379 Magi3Q9EQJ9 1476 aa31,93■■■□□ 2,7
Sqstm1-205ENSMUST00000143379 Cngb1E1AZ71 1325 aa31,92■■■□□ 2,7
Sqstm1-205ENSMUST00000143379 AknaQ80VW7 1404 aa31,92■■■□□ 2,7
Sqstm1-205ENSMUST00000143379 Fmn1Q05860 1466 aa31,84■■■□□ 2,69
Retrieved 100 of 22,080 RNA–protein pairs in 21,7 ms