RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Cgnl1Q6AW69 1298 aa21.63■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Ccar1Q8CH18 1146 aaKnown RBP21.63■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Drc7Q6V3W6 876 aa21.62■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Pak3Q61036 559 aa21.61■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Nap1l3Q794H2 544 aa21.61■■□□□ 1.05
Pcf11-201ENSMUST00000119954 CntlnA2AM05 1397 aa21.61■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Sh3bgrQ9WUZ7 214 aa21.61■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Zrsr2Q62377 462 aaKnown RBP21.61■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Pibf1E9Q6K3 756 aa21.61■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Arid4aF8VPQ2 1261 aaKnown RBP21.61■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Ksr2Q3UVC0 959 aa21.6■■□□□ 1.05
Pcf11-201ENSMUST00000119954 PrkcshO08795 521 aa21.6■■□□□ 1.05
Pcf11-201ENSMUST00000119954 CrbnQ8C7D2 445 aa21.6■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Ralbp1Q62172 648 aa21.59■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Utp3Q9JI13 469 aaKnown RBP21.59■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Golga3P55937 1487 aa21.59■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Filip1lQ6P6L0 1131 aa21.58■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Casq1O09165 405 aa21.58■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Ipo7Q9EPL8 1038 aaKnown RBP21.58■■□□□ 1.05
Pcf11-201ENSMUST00000119954 Spag9Q58A65 1321 aaKnown RBP21.57■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Rsf1E9PWW9 1441 aaKnown RBP21.57■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Tpm2P58774 284 aa21.57■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Rb1cc1Q9ESK9 1588 aa21.57■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Pdcl3Q8BVF2 240 aa21.57■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Dcaf11Q91VU6 549 aa21.57■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Map4P27546 1125 aaKnown RBP21.56■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Ccdc146E9Q9F7 977 aa21.56■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Tpm4Q6IRU2 248 aa21.56■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Ipo4Q8VI75 1082 aa21.55■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Ifit1bl1D3Z6F0 470 aa21.55■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Ccdc47Q9D024 483 aaKnown RBP21.55■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Gabpb2P81069 414 aa21.54■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Anp32eP97822 260 aaKnown RBP21.54■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Ercc6F8VPZ5 1481 aa21.53■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Ccdc18Q640L5 1455 aa21.52■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Samd1D3YXK1 519 aa21.52■■□□□ 1.04
Pcf11-201ENSMUST00000119954 Kif4P33174 1231 aa21.51■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Ncbp3Q8BZR9 615 aaKnown RBP21.51■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Gripap1Q8VD04 806 aa21.51■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Znhit6Q3UFB2 460 aaKnown RBP21.51■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Pnmal2G3X9N3 661 aa21.51■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Gm21969J3QJZ1 289 aa21.5■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Srek1Q8BZX4 494 aaKnown RBP21.49■■□□□ 1.03
Pcf11-201ENSMUST00000119954 AknaQ80VW7 1404 aa21.49■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Paf1Q8K2T8 535 aa21.49■■□□□ 1.03
Pcf11-201ENSMUST00000119954 CalrP14211 416 aaKnown RBP21.49■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Rufy1Q8BIJ7 712 aa21.48■■□□□ 1.03
Pcf11-201ENSMUST00000119954 A0A1L1SQF0 893 aa21.47■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Kri1Q8VDQ9 704 aaKnown RBP21.47■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Cwc15Q9JHS9 229 aaKnown RBP21.46■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Rfx1P48377 963 aa21.46■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Fam193aQ8CGI1 1231 aaKnown RBP21.46■■□□□ 1.03
Pcf11-201ENSMUST00000119954 Bcl11bQ99PV8 884 aa21.45■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Hmgn5Q9JL35 406 aa21.45■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Plcd4Q8K3R3 807 aa21.45■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Ccdc173A0JLY1 547 aa21.45■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Dixdc1Q80Y83 711 aa21.44■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Polr3gQ6NXY9 223 aa21.44■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Rock2P70336 1388 aa21.43■■□□□ 1.02
Pcf11-201ENSMUST00000119954 KinQ8K339 391 aa21.42■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Kif3aP28741 701 aa21.41■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Znf771Q8BJ90 317 aa21.41■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Bicd2Q921C5 820 aa21.41■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Krt82Q99M74 516 aa21.4■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Chaf1aQ9QWF0 911 aa21.4■■□□□ 1.02
Pcf11-201ENSMUST00000119954 EzrP26040 586 aaKnown RBP21.39■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Cplx2P84086 134 aa21.39■■□□□ 1.02
Pcf11-201ENSMUST00000119954 NaspQ99MD9 773 aaKnown RBP21.39■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Mphosph9A6H5Y1 991 aa21.39■■□□□ 1.02
Pcf11-201ENSMUST00000119954 Slc4a10Q5DTL9 1118 aa21.39■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Evc2Q8K1G2 1220 aa21.39■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Eif2s2Q99L45 331 aaKnown RBP21.39■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Ak7Q9D2H2 614 aa21.39■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Trak1Q6PD31 939 aa21.38■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Gcom1E9PZ54 550 aa21.38■■□□□ 1.01
Pcf11-201ENSMUST00000119954 MyzapQ3UIJ9 466 aa21.38■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Rec8Q8C5S7 591 aa21.38■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Lemd3Q9WU40 921 aa21.37■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Rrp9Q91WM3 475 aaKnown RBP21.37■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Rabep1O35551 862 aa21.36■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Hook1Q8BIL5 728 aa21.36■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Fam13bQ8K2H3 851 aa21.36■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Odf2A3KGV1 830 aaKnown RBP21.36■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Dctn1O08788 1281 aa21.35■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Kif3cO35066 796 aa21.35■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Srcin1Q9QWI6 1250 aa21.35■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Dhx16G3X8X0 1044 aaKnown RBP21.34■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Ap3b2Q9JME5 1082 aa21.34■■□□□ 1.01
Pcf11-201ENSMUST00000119954 AppP12023 770 aa21.34■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Kif16bB1AVY7 1312 aa21.33■■□□□ 1.01
Pcf11-201ENSMUST00000119954 Ccdc60Q8C4J0 545 aa21.32■■□□□ 1
Pcf11-201ENSMUST00000119954 AampJ3QN89 436 aa21.32■■□□□ 1
Pcf11-201ENSMUST00000119954 A0A0U1RNP2 1173 aa21.31■■□□□ 1
Pcf11-201ENSMUST00000119954 Mns1Q61884 491 aa21.31■■□□□ 1
Pcf11-201ENSMUST00000119954 Smg6P61406 1418 aaKnown RBP21.29■■□□□ 1
Pcf11-201ENSMUST00000119954 Cplx1P63040 134 aa21.29■■□□□ 1
Pcf11-201ENSMUST00000119954 Def6Q8C2K1 630 aa21.29■■□□□ 1
Pcf11-201ENSMUST00000119954 Smc3Q9CW03 1217 aaKnown RBP21.29■■□□□ 1
Pcf11-201ENSMUST00000119954 Tsen2Q6P7W5 460 aa21.28■■□□□ 1
Pcf11-201ENSMUST00000119954 Kif27Q7M6Z4 1394 aa21.28■■□□□ 1
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms