RNA–Protein interactions for RNA: ENSMUST00000116522.7

Nck1-202, Transcript of Cytoplasmic protein NCK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nck1, Length 4,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-202ENSMUST00000116522 Kif7B7ZNG0 1348 aa18.49■□□□□ 0.55
Nck1-202ENSMUST00000116522 Mfap1aC0HKD8 439 aaKnown RBP18.49■□□□□ 0.55
Nck1-202ENSMUST00000116522 Mfap1bC0HKD9 439 aaKnown RBP18.49■□□□□ 0.55
Nck1-202ENSMUST00000116522 Ttll5Q8CHB8 1328 aa18.48■□□□□ 0.55
Nck1-202ENSMUST00000116522 Znf316Q6PGE4 1016 aa18.48■□□□□ 0.55
Nck1-202ENSMUST00000116522 Usp40Q8BWR4 1235 aa18.47■□□□□ 0.55
Nck1-202ENSMUST00000116522 KnstrnQ9D9Z1 312 aaKnown RBP18.47■□□□□ 0.55
Nck1-202ENSMUST00000116522 Gm7298A0A0N4SVU1 1476 aa18.46■□□□□ 0.55
Nck1-202ENSMUST00000116522 Camsap1A2AHC3 1581 aa18.45■□□□□ 0.54
Nck1-202ENSMUST00000116522 Pcf11G3X9Z4 1553 aa18.45■□□□□ 0.54
Nck1-202ENSMUST00000116522 Washc2Q6PGL7 1334 aa18.43■□□□□ 0.54
Nck1-202ENSMUST00000116522 Tsen2Q6P7W5 460 aa18.43■□□□□ 0.54
Nck1-202ENSMUST00000116522 Dnttip2Q8R2M2 758 aaKnown RBP18.43■□□□□ 0.54
Nck1-202ENSMUST00000116522 Iqcf3Q9D498 203 aa18.43■□□□□ 0.54
Nck1-202ENSMUST00000116522 Naip2Q9QUK4 1447 aa18.43■□□□□ 0.54
Nck1-202ENSMUST00000116522 Zfp444Q3TDV8 331 aaKnown RBP18.43■□□□□ 0.54
Nck1-202ENSMUST00000116522 Lmod3E9QA62 571 aa18.42■□□□□ 0.54
Nck1-202ENSMUST00000116522 Chmp4bQ9D8B3 224 aaKnown RBP18.42■□□□□ 0.54
Nck1-202ENSMUST00000116522 Sart3Q9JLI8 962 aaKnown RBP18.42■□□□□ 0.54
Nck1-202ENSMUST00000116522 CadpsQ80TJ1 1355 aa18.41■□□□□ 0.54
Nck1-202ENSMUST00000116522 GorabQ8BRM2 368 aa18.41■□□□□ 0.54
Nck1-202ENSMUST00000116522 Arhgap31A6X8Z5 1425 aa18.4■□□□□ 0.54
Nck1-202ENSMUST00000116522 Urb2E9Q7L1 1524 aaKnown RBP18.4■□□□□ 0.54
Nck1-202ENSMUST00000116522 EprsQ8CGC7 1512 aaKnown RBP18.39■□□□□ 0.54
Nck1-202ENSMUST00000116522 Ccar1Q8CH18 1146 aaKnown RBP18.39■□□□□ 0.53
Nck1-202ENSMUST00000116522 Hsp90b1P08113 802 aaKnown RBP18.38■□□□□ 0.53
Nck1-202ENSMUST00000116522 A2mQ6GQT1 1474 aa18.38■□□□□ 0.53
Nck1-202ENSMUST00000116522 Pde4cQ3UEI1 686 aa18.37■□□□□ 0.53
Nck1-202ENSMUST00000116522 Ccdc30Q8BVF4 654 aa18.37■□□□□ 0.53
Nck1-202ENSMUST00000116522 TchhA0A0B4J1F9 1599 aa18.37■□□□□ 0.53
Nck1-202ENSMUST00000116522 Eif2s2Q99L45 331 aaKnown RBP18.37■□□□□ 0.53
Nck1-202ENSMUST00000116522 Ncoa2Q61026 1462 aa18.36■□□□□ 0.53
Nck1-202ENSMUST00000116522 Stard8Q8K031 1019 aa18.36■□□□□ 0.53
Nck1-202ENSMUST00000116522 Prkrip1Q9CWV6 186 aaKnown RBP18.36■□□□□ 0.53
Nck1-202ENSMUST00000116522 GsdmaQ9EST1 446 aa18.36■□□□□ 0.53
Nck1-202ENSMUST00000116522 Ttll13A4Q9F6 804 aa18.36■□□□□ 0.53
Nck1-202ENSMUST00000116522 Pibf1E9Q6K3 756 aa18.35■□□□□ 0.53
Nck1-202ENSMUST00000116522 Ppp1r18Q8BQ30 594 aa18.35■□□□□ 0.53
Nck1-202ENSMUST00000116522 Utp14aQ640M1 767 aaKnown RBP18.35■□□□□ 0.53
Nck1-202ENSMUST00000116522 Wdr62Q3U3T8 1523 aa18.33■□□□□ 0.53
Nck1-202ENSMUST00000116522 Ak7Q9D2H2 614 aa18.33■□□□□ 0.53
Nck1-202ENSMUST00000116522 Plekhg5Q66T02 1073 aa18.33■□□□□ 0.52
Nck1-202ENSMUST00000116522 Map3k5O35099 1380 aa18.33■□□□□ 0.52
Nck1-202ENSMUST00000116522 Ccdc60Q8C4J0 545 aa18.32■□□□□ 0.52
Nck1-202ENSMUST00000116522 Pank1Q8K4K6 548 aa18.32■□□□□ 0.52
Nck1-202ENSMUST00000116522 Myom3A2ABU4 1439 aa18.32■□□□□ 0.52
Nck1-202ENSMUST00000116522 Ralbp1Q62172 648 aa18.32■□□□□ 0.52
Nck1-202ENSMUST00000116522 AU015836B2RUM3 263 aa18.32■□□□□ 0.52
Nck1-202ENSMUST00000116522 Soga1E1U8D0 1418 aa18.32■□□□□ 0.52
Nck1-202ENSMUST00000116522 L3mbtl2P59178 703 aa18.31■□□□□ 0.52
Nck1-202ENSMUST00000116522 HnrnpuQ8VEK3 800 aaKnown RBP18.31■□□□□ 0.52
Nck1-202ENSMUST00000116522 Kif16bB1AVY7 1312 aa18.31■□□□□ 0.52
Nck1-202ENSMUST00000116522 Slx4Q6P1D7 1565 aa18.31■□□□□ 0.52
Nck1-202ENSMUST00000116522 3425401B19RikD3Z1D3 1412 aa18.3■□□□□ 0.52
Nck1-202ENSMUST00000116522 Cd109Q8R422 1442 aa18.3■□□□□ 0.52
Nck1-202ENSMUST00000116522 CenpjQ569L8 1344 aa18.3■□□□□ 0.52
Nck1-202ENSMUST00000116522 Lamc3Q9R0B6 1581 aa18.29■□□□□ 0.52
Nck1-202ENSMUST00000116522 Mink1Q9JM52 1308 aa18.29■□□□□ 0.52
Nck1-202ENSMUST00000116522 Ppp2r1aQ76MZ3 589 aa18.29■□□□□ 0.52
Nck1-202ENSMUST00000116522 Rtf1A2AQ19 715 aaKnown RBP18.28■□□□□ 0.52
Nck1-202ENSMUST00000116522 Naip5Q9R016 1403 aa18.28■□□□□ 0.52
Nck1-202ENSMUST00000116522 NexmifQ5DTT1 1515 aa18.28■□□□□ 0.52
Nck1-202ENSMUST00000116522 Sox12Q04890 314 aa18.27■□□□□ 0.52
Nck1-202ENSMUST00000116522 Txndc2Q6P902 515 aa18.27■□□□□ 0.52
Nck1-202ENSMUST00000116522 Ankrd26Q811D2 1581 aa18.27■□□□□ 0.51
Nck1-202ENSMUST00000116522 Abcc5Q9R1X5 1436 aa18.27■□□□□ 0.51
Nck1-202ENSMUST00000116522 Tnnt1O88346 262 aa18.26■□□□□ 0.51
Nck1-202ENSMUST00000116522 Gtf3c3Q3TMP1 882 aa18.26■□□□□ 0.51
Nck1-202ENSMUST00000116522 Trim58Q5NCC9 485 aa18.25■□□□□ 0.51
Nck1-202ENSMUST00000116522 Shq1Q7TMX5 569 aa18.25■□□□□ 0.51
Nck1-202ENSMUST00000116522 Rtn4Q99P72 1162 aaKnown RBP18.25■□□□□ 0.51
Nck1-202ENSMUST00000116522 ErbinQ80TH2 1402 aa18.25■□□□□ 0.51
Nck1-202ENSMUST00000116522 Ccdc146E9Q9F7 977 aa18.25■□□□□ 0.51
Nck1-202ENSMUST00000116522 Psme1P97371 249 aa18.25■□□□□ 0.51
Nck1-202ENSMUST00000116522 KarsQ99MN1 595 aaKnown RBP18.25■□□□□ 0.51
Nck1-202ENSMUST00000116522 PrkcshO08795 521 aa18.24■□□□□ 0.51
Nck1-202ENSMUST00000116522 MyclP10166 368 aa18.24■□□□□ 0.51
Nck1-202ENSMUST00000116522 Erich6bQ9D4S6 220 aa18.24■□□□□ 0.51
Nck1-202ENSMUST00000116522 Il16O54824 1322 aa18.24■□□□□ 0.51
Nck1-202ENSMUST00000116522 Mre11Q61216 706 aa18.23■□□□□ 0.51
Nck1-202ENSMUST00000116522 Casc1Q6TDU8 730 aa18.23■□□□□ 0.51
Nck1-202ENSMUST00000116522 Nsd2Q8BVE8 1365 aa18.23■□□□□ 0.51
Nck1-202ENSMUST00000116522 Plb1Q3TTY0 1478 aa18.23■□□□□ 0.51
Nck1-202ENSMUST00000116522 Q3TQI7 289 aaKnown RBP18.22■□□□□ 0.51
Nck1-202ENSMUST00000116522 Puf60Q3UEB3 564 aaKnown RBP18.22■□□□□ 0.51
Nck1-202ENSMUST00000116522 Ylpm1Q9R0I7 1386 aaKnown RBP18.22■□□□□ 0.51
Nck1-202ENSMUST00000116522 Mug1P28665 1476 aa18.22■□□□□ 0.51
Nck1-202ENSMUST00000116522 G3bp1P97855 465 aaKnown RBP18.21■□□□□ 0.51
Nck1-202ENSMUST00000116522 SynmQ70IV5 1561 aa18.21■□□□□ 0.51
Nck1-202ENSMUST00000116522 Fam163aQ8CAA5 168 aa18.21■□□□□ 0.51
Nck1-202ENSMUST00000116522 Plekhh1Q80TI1 1356 aa18.2■□□□□ 0.5
Nck1-202ENSMUST00000116522 SlkO54988 1233 aa18.19■□□□□ 0.5
Nck1-202ENSMUST00000116522 Prdm16A2A935 1275 aa18.19■□□□□ 0.5
Nck1-202ENSMUST00000116522 Ncoa1P70365 1447 aa18.18■□□□□ 0.5
Nck1-202ENSMUST00000116522 Apaf1O88879 1249 aa18.18■□□□□ 0.5
Nck1-202ENSMUST00000116522 Arhgap5P97393 1501 aa18.18■□□□□ 0.5
Nck1-202ENSMUST00000116522 Rfx1P48377 963 aa18.17■□□□□ 0.5
Nck1-202ENSMUST00000116522 Rab3gap2Q8BMG7 1366 aa18.17■□□□□ 0.5
Nck1-202ENSMUST00000116522 MccE9PWI3 1003 aa18.17■□□□□ 0.5
Nck1-202ENSMUST00000116522 Ccdc183A2AJB1 534 aa18.17■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms