RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Tsen2Q6P7W5 460 aa26,92■■□□□ 1,9
Smarcc1-201ENSMUST00000088716 Pank3Q8R2W9 370 aa26,9■■□□□ 1,9
Smarcc1-201ENSMUST00000088716 Usp47Q8BY87 1376 aa26,89■■□□□ 1,89
Smarcc1-201ENSMUST00000088716 Stk31Q99MW1 1018 aa26,88■■□□□ 1,89
Smarcc1-201ENSMUST00000088716 MsnP26041 577 aaKnown RBP26,87■■□□□ 1,89
Smarcc1-201ENSMUST00000088716 CrebrfQ8CDG5 640 aaKnown RBP26,85■■□□□ 1,89
Smarcc1-201ENSMUST00000088716 Atp6v1dP57746 247 aa26,84■■□□□ 1,89
Smarcc1-201ENSMUST00000088716 Crybg2B7ZCC2 1516 aa26,84■■□□□ 1,89
Smarcc1-201ENSMUST00000088716 Cgnl1Q6AW69 1298 aa26,84■■□□□ 1,89
Smarcc1-201ENSMUST00000088716 Ccdc146E9Q9F7 977 aa26,81■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Pak3Q61036 559 aa26,81■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Cecr2E9Q2Z1 1453 aa26,81■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Cald1E9QA15 768 aaKnown RBP26,8■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Slc4a10Q5DTL9 1118 aa26,79■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Synj1Q8CHC4 1574 aa26,79■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Tnnt2P50752 301 aa26,78■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Cabp4Q8VHC5 271 aa26,78■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 RdxP26043 583 aaKnown RBP26,77■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Usp40Q8BWR4 1235 aa26,77■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Smg6P61406 1418 aaKnown RBP26,77■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 LrpprcQ6PB66 1392 aaKnown RBP26,77■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Ccdc60Q8C4J0 545 aa26,77■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Inpp5dQ9ES52 1191 aa26,77■■□□□ 1,88
Smarcc1-201ENSMUST00000088716 Ylpm1Q9R0I7 1386 aaKnown RBP26,76■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 Shq1Q7TMX5 569 aa26,74■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 Atad2bE9Q166 1460 aaKnown RBP26,74■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 GsdmaQ9EST1 446 aa26,73■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 Rock1P70335 1354 aa26,73■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 Bcl11aQ9QYE3 773 aa26,72■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 Ccer1Q9CQL2 403 aa26,71■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 Ccdc47Q9D024 483 aaKnown RBP26,71■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 Fam184bQ0KK56 942 aa26,7■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 Kif7B7ZNG0 1348 aa26,7■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 WrnO09053 1401 aa26,7■■□□□ 1,87
Smarcc1-201ENSMUST00000088716 Rab11fip3Q8CHD8 1047 aa26,69■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 G3bp1P97855 465 aaKnown RBP26,67■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 Tpd52l1O54818 204 aa26,67■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 ChgaP26339 463 aaKnown RBP26,66■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 Mink1Q9JM52 1308 aa26,66■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 Rrp12Q6P5B0 1295 aaKnown RBP26,65■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 SlkO54988 1233 aa26,64■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 Rsph3aQ3UFY4 516 aa26,64■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 Dhx29Q6PGC1 1365 aaKnown RBP26,64■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 Cc2d2bA0A286YDU8 1405 aa26,64■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 Smarca2Q6DIC0 1577 aa26,64■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 Smarca4Q3TKT4 1613 aaKnown RBP26,64■■□□□ 1,86
Smarcc1-201ENSMUST00000088716 Ncoa2Q61026 1462 aa26,62■■□□□ 1,85
Smarcc1-201ENSMUST00000088716 Cspp1B2RX88 1205 aa26,62■■□□□ 1,85
Smarcc1-201ENSMUST00000088716 AppP12023 770 aa26,62■■□□□ 1,85
Smarcc1-201ENSMUST00000088716 Kiaa0754Q69ZZ9 979 aa26,61■■□□□ 1,85
Smarcc1-201ENSMUST00000088716 Smc4Q8CG47 1286 aa26,61■■□□□ 1,85
Smarcc1-201ENSMUST00000088716 Mical1Q8VDP3 1048 aa26,6■■□□□ 1,85
Smarcc1-201ENSMUST00000088716 Dapk1Q80YE7 1442 aa26,59■■□□□ 1,85
Smarcc1-201ENSMUST00000088716 Ralbp1Q62172 648 aa26,59■■□□□ 1,85
Smarcc1-201ENSMUST00000088716 St18Q80TY4 1045 aa26,59■■□□□ 1,85
Smarcc1-201ENSMUST00000088716 Sf3a1Q8K4Z5 791 aaKnown RBP26,58■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Nolc1E9Q5C9 702 aaKnown RBP26,57■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Zscan10Q3URR7 782 aa26,57■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 ErbinQ80TH2 1402 aa26,57■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Tpm3P21107 285 aaKnown RBP26,56■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Filip1lQ6P6L0 1131 aa26,56■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Soga1E1U8D0 1418 aa26,56■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Cc2d1aQ8K1A6 943 aa26,55■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Gpatch11Q3UFS4 262 aa26,54■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Tdrd9Q14BI7 1383 aa26,54■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Gm21190A0A0G2JGJ6 266 aa26,54■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Cttnbp2B9EJA2 1648 aa26,53■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Pabpn1Q8CCS6 302 aaKnown RBP26,53■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Chmp7Q8R1T1 451 aa26,53■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Nap1l3Q794H2 544 aa26,53■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Trim30aP15533 496 aa26,52■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Ddrgk1Q80WW9 315 aa26,52■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Isy1Q69ZQ2 285 aaKnown RBP26,52■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Vps53Q8CCB4 832 aa26,52■■□□□ 1,84
Smarcc1-201ENSMUST00000088716 Jph4Q80WT0 628 aa26,51■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 4933402E13RikQ9D4D2 429 aa26,51■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Esx1O88933 382 aa26,5■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Gm21969J3QJZ1 289 aa26,5■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Becn1O88597 448 aa26,5■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Casq1O09165 405 aa26,49■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Tceal9Q9DD24 104 aa26,48■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Triml2E9PW10 424 aa26,48■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 AampJ3QN89 436 aa26,48■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Cux1P53564 1515 aa26,47■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Eif2s2Q99L45 331 aaKnown RBP26,47■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Trim58Q5NCC9 485 aa26,47■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Srek1Q8BZX4 494 aaKnown RBP26,46■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Tomm22Q9CPQ3 142 aa26,46■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Nsd2Q8BVE8 1365 aa26,46■■□□□ 1,83
Smarcc1-201ENSMUST00000088716 Fyb1O35601 819 aa26,45■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 Cplx2P84086 134 aa26,44■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 Ciz1Q8VEH2 845 aa26,44■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 Kri1Q8VDQ9 704 aaKnown RBP26,44■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 KinQ8K339 391 aa26,44■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 Glipr1l2Q9CQ35 332 aa26,44■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 Ubap1lG3UW59 384 aa26,43■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 SetQ9EQU5 289 aaKnown RBP26,43■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 Ppm1fQ8CGA0 452 aa26,43■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 Gsto1O09131 240 aa26,42■■□□□ 1,82
Smarcc1-201ENSMUST00000088716 Ddx11Q6AXC6 880 aa26,42■■□□□ 1,82
Retrieved 100 of 22,080 RNA–protein pairs in 6,9 ms