RNA–Protein interactions for RNA: ENSMUST00000075666.7

Upf1-201, Transcript of Regulator of nonsense transcripts 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Upf1, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1-201ENSMUST00000075666 Cux1P53564 1515 aa23,67■■□□□ 1,38
Upf1-201ENSMUST00000075666 1700019A02RikA0A087WPV9 146 aa23,67■■□□□ 1,38
Upf1-201ENSMUST00000075666 Hsp90b1P08113 802 aaKnown RBP23,67■■□□□ 1,38
Upf1-201ENSMUST00000075666 Plekhg5Q66T02 1073 aa23,66■■□□□ 1,38
Upf1-201ENSMUST00000075666 Top2bQ64511 1612 aa23,66■■□□□ 1,38
Upf1-201ENSMUST00000075666 LrpprcQ6PB66 1392 aaKnown RBP23,65■■□□□ 1,38
Upf1-201ENSMUST00000075666 Rabep1O35551 862 aa23,64■■□□□ 1,37
Upf1-201ENSMUST00000075666 Ralbp1Q62172 648 aa23,64■■□□□ 1,37
Upf1-201ENSMUST00000075666 Ccdc30Q8BVF4 654 aa23,64■■□□□ 1,37
Upf1-201ENSMUST00000075666 Fam184bQ0KK56 942 aa23,63■■□□□ 1,37
Upf1-201ENSMUST00000075666 Trim58Q5NCC9 485 aa23,63■■□□□ 1,37
Upf1-201ENSMUST00000075666 KarsQ99MN1 595 aaKnown RBP23,63■■□□□ 1,37
Upf1-201ENSMUST00000075666 PtprkP35822 1457 aa23,62■■□□□ 1,37
Upf1-201ENSMUST00000075666 Map3k1P53349 1493 aa23,61■■□□□ 1,37
Upf1-201ENSMUST00000075666 Kif16bB1AVY7 1312 aa23,61■■□□□ 1,37
Upf1-201ENSMUST00000075666 Becn1O88597 448 aa23,61■■□□□ 1,37
Upf1-201ENSMUST00000075666 MccE9PWI3 1003 aa23,6■■□□□ 1,37
Upf1-201ENSMUST00000075666 Rfx1P48377 963 aa23,6■■□□□ 1,37
Upf1-201ENSMUST00000075666 Ush1cQ9ES64 910 aa23,59■■□□□ 1,37
Upf1-201ENSMUST00000075666 Dhx57Q6P5D3 1388 aaKnown RBP23,58■■□□□ 1,37
Upf1-201ENSMUST00000075666 Rrp9Q91WM3 475 aaKnown RBP23,58■■□□□ 1,37
Upf1-201ENSMUST00000075666 Irx6Q9ER75 438 aa23,58■■□□□ 1,36
Upf1-201ENSMUST00000075666 Plekhh1Q80TI1 1356 aa23,57■■□□□ 1,36
Upf1-201ENSMUST00000075666 Efcab5A0JP43 1406 aa23,57■■□□□ 1,36
Upf1-201ENSMUST00000075666 Ecm2Q5FW85 670 aa23,57■■□□□ 1,36
Upf1-201ENSMUST00000075666 Kif7B7ZNG0 1348 aa23,57■■□□□ 1,36
Upf1-201ENSMUST00000075666 Ift140E9PY46 1464 aa23,57■■□□□ 1,36
Upf1-201ENSMUST00000075666 Pank1Q8K4K6 548 aa23,56■■□□□ 1,36
Upf1-201ENSMUST00000075666 NrkQ9R0G8 1455 aa23,56■■□□□ 1,36
Upf1-201ENSMUST00000075666 Iqgap2Q3UQ44 1575 aa23,56■■□□□ 1,36
Upf1-201ENSMUST00000075666 Gtf2a1Q99PM3 378 aa23,56■■□□□ 1,36
Upf1-201ENSMUST00000075666 Pcmtd1P59913 357 aa23,55■■□□□ 1,36
Upf1-201ENSMUST00000075666 U2surpQ6NV83 1029 aaKnown RBP23,54■■□□□ 1,36
Upf1-201ENSMUST00000075666 TchhA0A0B4J1F9 1599 aa23,53■■□□□ 1,36
Upf1-201ENSMUST00000075666 AampJ3QN89 436 aa23,53■■□□□ 1,36
Upf1-201ENSMUST00000075666 Tnpo1Q8BFY9 898 aaKnown RBP23,5■■□□□ 1,35
Upf1-201ENSMUST00000075666 Atl3Q91YH5 541 aa23,5■■□□□ 1,35
Upf1-201ENSMUST00000075666 Phf14Q9D4H9 881 aa23,49■■□□□ 1,35
Upf1-201ENSMUST00000075666 Tsen2Q6P7W5 460 aa23,49■■□□□ 1,35
Upf1-201ENSMUST00000075666 Fan1Q69ZT1 1020 aa23,48■■□□□ 1,35
Upf1-201ENSMUST00000075666 GsdmaQ9EST1 446 aa23,47■■□□□ 1,35
Upf1-201ENSMUST00000075666 Stard8Q8K031 1019 aa23,47■■□□□ 1,35
Upf1-201ENSMUST00000075666 Mroh2bQ7M6Y6 1581 aa23,47■■□□□ 1,35
Upf1-201ENSMUST00000075666 Sart1Q9Z315 806 aaKnown RBP23,47■■□□□ 1,35
Upf1-201ENSMUST00000075666 Naip2Q9QUK4 1447 aa23,46■■□□□ 1,35
Upf1-201ENSMUST00000075666 Ccdc60Q8C4J0 545 aa23,46■■□□□ 1,35
Upf1-201ENSMUST00000075666 WrnO09053 1401 aa23,45■■□□□ 1,35
Upf1-201ENSMUST00000075666 Naip5Q9R016 1403 aa23,45■■□□□ 1,35
Upf1-201ENSMUST00000075666 Casq1O09165 405 aa23,45■■□□□ 1,34
Upf1-201ENSMUST00000075666 Ccdc146E9Q9F7 977 aa23,45■■□□□ 1,34
Upf1-201ENSMUST00000075666 Ncoa1P70365 1447 aa23,44■■□□□ 1,34
Upf1-201ENSMUST00000075666 Senp3Q9EP97 568 aaKnown RBP23,44■■□□□ 1,34
Upf1-201ENSMUST00000075666 Ppp2r3aB2RXC8 1150 aa23,43■■□□□ 1,34
Upf1-201ENSMUST00000075666 Stk26Q99JT2 416 aa23,42■■□□□ 1,34
Upf1-201ENSMUST00000075666 IbspQ61711 324 aa23,42■■□□□ 1,34
Upf1-201ENSMUST00000075666 Ppp2r1aQ76MZ3 589 aa23,42■■□□□ 1,34
Upf1-201ENSMUST00000075666 Tdrd9Q14BI7 1383 aa23,42■■□□□ 1,34
Upf1-201ENSMUST00000075666 Plin1Q8CGN5 517 aa23,41■■□□□ 1,34
Upf1-201ENSMUST00000075666 Phldb1Q6PDH0 1371 aaKnown RBP23,41■■□□□ 1,34
Upf1-201ENSMUST00000075666 Gm973E9Q295 1059 aa23,41■■□□□ 1,34
Upf1-201ENSMUST00000075666 Dhx9O70133 1380 aaKnown RBP23,41■■□□□ 1,34
Upf1-201ENSMUST00000075666 Fbxo2Q80UW2 297 aa23,4■■□□□ 1,34
Upf1-201ENSMUST00000075666 Kiaa0754Q69ZZ9 979 aa23,39■■□□□ 1,33
Upf1-201ENSMUST00000075666 Cgnl1Q6AW69 1298 aa23,39■■□□□ 1,33
Upf1-201ENSMUST00000075666 G3bp1P97855 465 aaKnown RBP23,38■■□□□ 1,33
Upf1-201ENSMUST00000075666 Cc2d2bA0A286YDU8 1405 aa23,38■■□□□ 1,33
Upf1-201ENSMUST00000075666 Gpatch11Q3UFS4 262 aa23,37■■□□□ 1,33
Upf1-201ENSMUST00000075666 Znf316Q6PGE4 1016 aa23,37■■□□□ 1,33
Upf1-201ENSMUST00000075666 Egfem1Q8C088 590 aa23,37■■□□□ 1,33
Upf1-201ENSMUST00000075666 AqrQ8CFQ3 1481 aaKnown RBP23,36■■□□□ 1,33
Upf1-201ENSMUST00000075666 Znf692Q3U381 531 aa23,36■■□□□ 1,33
Upf1-201ENSMUST00000075666 Usp40Q8BWR4 1235 aa23,36■■□□□ 1,33
Upf1-201ENSMUST00000075666 Gm7298A0A0N4SVU1 1476 aa23,36■■□□□ 1,33
Upf1-201ENSMUST00000075666 Eif4g2Q62448 906 aaKnown RBP23,36■■□□□ 1,33
Upf1-201ENSMUST00000075666 Ttll5Q8CHB8 1328 aa23,35■■□□□ 1,33
Upf1-201ENSMUST00000075666 Myom3A2ABU4 1439 aa23,35■■□□□ 1,33
Upf1-201ENSMUST00000075666 Sptbn5F6UCX4 1208 aa23,34■■□□□ 1,33
Upf1-201ENSMUST00000075666 Kif3bQ61771 747 aa23,34■■□□□ 1,33
Upf1-201ENSMUST00000075666 Birc3O08863 600 aa23,34■■□□□ 1,33
Upf1-201ENSMUST00000075666 Atp6v1dP57746 247 aa23,34■■□□□ 1,33
Upf1-201ENSMUST00000075666 Trim30aP15533 496 aa23,34■■□□□ 1,33
Upf1-201ENSMUST00000075666 RdxP26043 583 aaKnown RBP23,33■■□□□ 1,32
Upf1-201ENSMUST00000075666 Tpm2P58774 284 aa23,32■■□□□ 1,32
Upf1-201ENSMUST00000075666 Rab3gap2Q8BMG7 1366 aa23,32■■□□□ 1,32
Upf1-201ENSMUST00000075666 CgnP59242 1191 aa23,32■■□□□ 1,32
Upf1-201ENSMUST00000075666 Polr1aO35134 1717 aaKnown RBP23,31■■□□□ 1,32
Upf1-201ENSMUST00000075666 Glipr1l2Q9CQ35 332 aa23,31■■□□□ 1,32
Upf1-201ENSMUST00000075666 Kank1E9Q238 1360 aa23,31■■□□□ 1,32
Upf1-201ENSMUST00000075666 Grin2bQ01097 1482 aa23,31■■□□□ 1,32
Upf1-201ENSMUST00000075666 Ssh1Q76I79 1042 aa23,3■■□□□ 1,32
Upf1-201ENSMUST00000075666 Paxip1Q6NZQ4 1056 aa23,3■■□□□ 1,32
Upf1-201ENSMUST00000075666 Ncoa2Q61026 1462 aa23,29■■□□□ 1,32
Upf1-201ENSMUST00000075666 Smarce1O54941 411 aaKnown RBP23,29■■□□□ 1,32
Upf1-201ENSMUST00000075666 Smc5Q8CG46 1101 aaKnown RBP23,29■■□□□ 1,32
Upf1-201ENSMUST00000075666 A2mQ6GQT1 1474 aa23,29■■□□□ 1,32
Upf1-201ENSMUST00000075666 Isy1Q69ZQ2 285 aaKnown RBP23,28■■□□□ 1,32
Upf1-201ENSMUST00000075666 Zfp777B9EKF4 885 aa23,28■■□□□ 1,32
Upf1-201ENSMUST00000075666 Pcf11G3X9Z4 1553 aa23,27■■□□□ 1,32
Upf1-201ENSMUST00000075666 Spag9Q58A65 1321 aaKnown RBP23,27■■□□□ 1,32
Upf1-201ENSMUST00000075666 Pes1Q9EQ61 584 aaKnown RBP23,27■■□□□ 1,32
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms