RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Kif3bQ61771 747 aa15.64■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Tomm22Q9CPQ3 142 aa15.63■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Chmp4cQ9D7F7 232 aa15.63■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Tpd52l1O54818 204 aa15.63■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Lemd3Q9WU40 921 aa15.62■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Smarce1O54941 411 aaKnown RBP15.62■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Dnai2A2AC93 623 aa15.62■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Pak3Q61036 559 aa15.62■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 IbspQ61711 324 aa15.6■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Tsen2Q6P7W5 460 aa15.6■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 SetQ9EQU5 289 aaKnown RBP15.6■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Sf3a1Q8K4Z5 791 aaKnown RBP15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Rfx1P48377 963 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Drc7Q6V3W6 876 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Ccdc88bQ4QRL3 1481 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 AppP12023 770 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Polr3gQ6NXY9 223 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Pank3Q8R2W9 370 aa15.58■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Ccdc60Q8C4J0 545 aa15.58■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Tpm3P21107 285 aaKnown RBP15.58■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Nup155Q99P88 1391 aaKnown RBP15.57■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Wdr78E9PYY5 807 aa15.56■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Fam193aQ8CGI1 1231 aaKnown RBP15.56■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Cep162Q6ZQ06 1403 aa15.55■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Utp14aQ640M1 767 aaKnown RBP15.55■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Becn1O88597 448 aa15.55■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Eif2s2Q99L45 331 aaKnown RBP15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Fyco1Q8VDC1 1437 aa15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Cabp4Q8VHC5 271 aa15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 VgfQ0VGU4 617 aa15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Bcl11bQ99PV8 884 aa15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Ripply1Q2WG77 201 aa15.53■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Arhgap35Q91YM2 1499 aa15.53■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 FosbP13346 338 aa15.53■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Inpp5dQ9ES52 1191 aa15.53■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 HdgfP51859 237 aaKnown RBP15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Utp3Q9JI13 469 aaKnown RBP15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 CntlnA2AM05 1397 aa15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Krt82Q99M74 516 aa15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Rsph3aQ3UFY4 516 aa15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Kri1Q8VDQ9 704 aaKnown RBP15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Ylpm1Q9R0I7 1386 aaKnown RBP15.52■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Gtf3c3Q3TMP1 882 aa15.52■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Paf1Q8K2T8 535 aa15.51■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Stk31Q99MW1 1018 aa15.51■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Ftsj3Q9DBE9 838 aaKnown RBP15.51■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Atp6v1dP57746 247 aa15.51■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Fnbp4Q6ZQ03 1031 aa15.5■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Ap3b2Q9JME5 1082 aa15.5■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Ddrgk1Q80WW9 315 aa15.5■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Filip1lQ6P6L0 1131 aa15.49■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Gm21969J3QJZ1 289 aa15.49■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Baz1bQ9Z277 1479 aa15.49■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 A0A0U1RNP2 1173 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Cspp1B2RX88 1205 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Nap1l3Q794H2 544 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Sh3bgrQ9WUZ7 214 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 St18Q80TY4 1045 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Gabpb2P81069 414 aa15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 CenpjQ569L8 1344 aa15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Ccdc47Q9D024 483 aaKnown RBP15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Phactr2B1AVP0 632 aa15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Triml2E9PW10 424 aa15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 G3bp1P97855 465 aaKnown RBP15.46■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Esx1O88933 382 aa15.46■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 AcrbpQ3V140 540 aa15.46■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Casq1O09165 405 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Znf704Q9ERQ3 566 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Ush1cQ9ES64 910 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Mink1Q9JM52 1308 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Ipo4Q8VI75 1082 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Klf15Q9EPW2 415 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Hdgfl1Q2VPR5 283 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Nol12Q8BG17 217 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Ak7Q9D2H2 614 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Tceal9Q9DD24 104 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Dhx16G3X8X0 1044 aaKnown RBP15.43■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Sart1Q9Z315 806 aaKnown RBP15.43■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 GsdmaQ9EST1 446 aa15.43■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Usp40Q8BWR4 1235 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Neurod6P48986 337 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Plekhh2Q8C115 1491 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Shq1Q7TMX5 569 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Nutm1Q8BHP2 1126 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Kif7B7ZNG0 1348 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Nectin2P32507 530 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Cgnl1Q6AW69 1298 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Fbxo2Q80UW2 297 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Bicd2Q921C5 820 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Usp47Q8BY87 1376 aa15.41■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Smg6P61406 1418 aaKnown RBP15.41■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Ccdc96Q9CR92 584 aa15.41■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Tpm4Q6IRU2 248 aa15.4■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Tpm1P58771 284 aa15.39■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Pip4k2bQ80XI4 416 aa15.39■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Tpm2P58774 284 aa15.38■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Podxl2Q8CAE9 603 aa15.38■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Bcl2l13P59017 434 aa15.38■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 BcanQ61361 883 aa15.38■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Ccp110Q7TSH4 1004 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 11 ms