RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Evc2Q8K1G2 1220 aa15.24■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Polr1aO35134 1717 aaKnown RBP15.24■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Casq1O09165 405 aa15.23■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Smg6P61406 1418 aaKnown RBP15.23■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Cluap1Q8R3P7 413 aa15.23■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Dhx57Q6P5D3 1388 aaKnown RBP15.23■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Gm21969J3QJZ1 289 aa15.23■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Ksr2Q3UVC0 959 aa15.22■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Sh3bgrQ9WUZ7 214 aa15.22■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Kdm5dQ62240 1548 aa15.22■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Ralbp1Q62172 648 aa15.22■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Anp32eP97822 260 aaKnown RBP15.22■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Hmgn5Q9JL35 406 aa15.22■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Chaf1aQ9QWF0 911 aa15.22■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Gabpb2P81069 414 aa15.21■□□□□ 0.03
Vcpip1-201ENSMUST00000057438 Kif7B7ZNG0 1348 aa15.2■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Znhit6Q3UFB2 460 aaKnown RBP15.2■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Rsph4aQ8BYM7 716 aa15.2■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 UacaQ8CGB3 1411 aa15.19■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Cwc15Q9JHS9 229 aaKnown RBP15.19■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Mphosph9A6H5Y1 991 aa15.19■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Rab11fip3Q8CHD8 1047 aa15.19■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Dcaf11Q91VU6 549 aa15.19■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Gcom1E9PZ54 550 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 CalrP14211 416 aaKnown RBP15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Kif3aP28741 701 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 MyzapQ3UIJ9 466 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Gripap1Q8VD04 806 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Utp3Q9JI13 469 aaKnown RBP15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Chmp3Q9CQ10 224 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Gprasp1Q5U4C1 1347 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Isy1Q69ZQ2 285 aaKnown RBP15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 KinQ8K339 391 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 EzrP26040 586 aaKnown RBP15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Cux1P53564 1515 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Ddx11Q6AXC6 880 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Ccdc173A0JLY1 547 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Hap1O35668 628 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Kif4P33174 1231 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Rufy1Q8BIJ7 712 aa15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Kri1Q8VDQ9 704 aaKnown RBP15.18■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Cplx2P84086 134 aa15.17■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Srcin1Q9QWI6 1250 aa15.17■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Znf330Q922H9 316 aa15.16■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Kif16bB1AVY7 1312 aa15.16■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Rock1P70335 1354 aa15.16■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Trak1Q6PD31 939 aa15.15■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Cttnbp2B9EJA2 1648 aa15.15■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Pdcl3Q8BVF2 240 aa15.15■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 CenpjQ569L8 1344 aa15.15■□□□□ 0.02
Vcpip1-201ENSMUST00000057438 Vps53Q8CCB4 832 aa15.14■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Odf2A3KGV1 830 aaKnown RBP15.14■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Kif3cO35066 796 aa15.14■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Birc3O08863 600 aa15.14■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Plin1Q8CGN5 517 aa15.14■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 CrbnQ8C7D2 445 aa15.14■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Pknox2Q8BG99 474 aa15.14■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Nup155Q99P88 1391 aaKnown RBP15.13■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Dctn1O08788 1281 aa15.13■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Rnf20Q5DTM8 973 aa15.12■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Stk26Q99JT2 416 aa15.12■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Krt82Q99M74 516 aa15.12■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 NaspQ99MD9 773 aaKnown RBP15.12■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Chmp4cQ9D7F7 232 aa15.12■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 ChgaP26339 463 aaKnown RBP15.12■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 PhaxQ9JJT9 385 aaKnown RBP15.12■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Ppp1r18Q8BQ30 594 aa15.11■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Tnnt1O88346 262 aa15.1■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Psme1P97371 249 aa15.1■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Smc4Q8CG47 1286 aa15.1■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Rpap1Q80TE0 1409 aa15.1■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Rabep1O35551 862 aa15.1■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 BccipQ9CWI3 316 aa15.1■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Gpatch3Q8BIY1 525 aa15.1■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Ciz1Q8VEH2 845 aa15.09■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Mical1Q8VDP3 1048 aa15.09■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Aebp1Q640N1 1128 aa15.08■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Dhx8A2A4P0 1244 aaKnown RBP15.08■□□□□ 0.01
Vcpip1-201ENSMUST00000057438 Rec8Q8C5S7 591 aa15.07■□□□□ 0
Vcpip1-201ENSMUST00000057438 Ppm1eQ80TL0 749 aa15.07■□□□□ 0
Vcpip1-201ENSMUST00000057438 Cplx1P63040 134 aa15.07■□□□□ 0
Vcpip1-201ENSMUST00000057438 Lemd3Q9WU40 921 aa15.07■□□□□ 0
Vcpip1-201ENSMUST00000057438 Slc4a10Q5DTL9 1118 aa15.06■□□□□ 0
Vcpip1-201ENSMUST00000057438 Pnmal2G3X9N3 661 aa15.06■□□□□ 0
Vcpip1-201ENSMUST00000057438 HmmrQ00547 794 aaKnown RBP15.06■□□□□ 0
Vcpip1-201ENSMUST00000057438 Drc7Q6V3W6 876 aa15.06■□□□□ 0
Vcpip1-201ENSMUST00000057438 Ccdc146E9Q9F7 977 aa15.05■□□□□ 0
Vcpip1-201ENSMUST00000057438 Mns1Q61884 491 aa15.05■□□□□ 0
Vcpip1-201ENSMUST00000057438 Q8BT18 775 aa15.05■□□□□ 0
Vcpip1-201ENSMUST00000057438 Atl3Q91YH5 541 aa15.05■□□□□ 0
Vcpip1-201ENSMUST00000057438 Necab1Q8BG18 352 aa15.05■□□□□ -0
Vcpip1-201ENSMUST00000057438 Usp47Q8BY87 1376 aa15.05■□□□□ -0
Vcpip1-201ENSMUST00000057438 Cchcr1Q8K2I2 770 aa15.05■□□□□ -0
Vcpip1-201ENSMUST00000057438 Bicd2Q921C5 820 aa15.05■□□□□ -0
Vcpip1-201ENSMUST00000057438 Dixdc1Q80Y83 711 aa15.04■□□□□ -0
Vcpip1-201ENSMUST00000057438 Stk31Q99MW1 1018 aa15.04■□□□□ -0
Vcpip1-201ENSMUST00000057438 Ubxn4Q8VCH8 506 aa15.04■□□□□ -0
Vcpip1-201ENSMUST00000057438 Pds5bQ4VA53 1446 aaKnown RBP15.04■□□□□ -0
Vcpip1-201ENSMUST00000057438 Tceal9Q9DD24 104 aa15.03■□□□□ -0
Vcpip1-201ENSMUST00000057438 AknaQ80VW7 1404 aa15.03■□□□□ -0
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms