RNA–Protein interactions for RNA: ENSMUST00000040159.5

C1galt1-201, Transcript of Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene C1galt1, Length 6,092 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1galt1-201ENSMUST00000040159 AppP12023 770 aa26.63■■□□□ 1.85
C1galt1-201ENSMUST00000040159 Ccdc146E9Q9F7 977 aa26.63■■□□□ 1.85
C1galt1-201ENSMUST00000040159 PtmsQ9D0J8 101 aaKnown RBP26.63■■□□□ 1.85
C1galt1-201ENSMUST00000040159 Rsph4aQ8BYM7 716 aa26.63■■□□□ 1.85
C1galt1-201ENSMUST00000040159 Ipo8Q7TMY7 1010 aa26.59■■□□□ 1.85
C1galt1-201ENSMUST00000040159 Mink1Q9JM52 1308 aa26.58■■□□□ 1.85
C1galt1-201ENSMUST00000040159 Pank3Q8R2W9 370 aa26.56■■□□□ 1.84
C1galt1-201ENSMUST00000040159 Cc2d1aQ8K1A6 943 aa26.55■■□□□ 1.84
C1galt1-201ENSMUST00000040159 Smarce1O54941 411 aaKnown RBP26.55■■□□□ 1.84
C1galt1-201ENSMUST00000040159 Pip4k2bQ80XI4 416 aa26.55■■□□□ 1.84
C1galt1-201ENSMUST00000040159 Tpd52l1O54818 204 aa26.54■■□□□ 1.84
C1galt1-201ENSMUST00000040159 Ccnb3Q810T2 1396 aa26.54■■□□□ 1.84
C1galt1-201ENSMUST00000040159 Pabpn1Q8CCS6 302 aaKnown RBP26.53■■□□□ 1.84
C1galt1-201ENSMUST00000040159 Ccer1Q9CQL2 403 aa26.52■■□□□ 1.84
C1galt1-201ENSMUST00000040159 Gm21190A0A0G2JGJ6 266 aa26.51■■□□□ 1.83
C1galt1-201ENSMUST00000040159 Usp40Q8BWR4 1235 aa26.51■■□□□ 1.83
C1galt1-201ENSMUST00000040159 Noc3lQ8VI84 807 aaKnown RBP26.51■■□□□ 1.83
C1galt1-201ENSMUST00000040159 Ccdc60Q8C4J0 545 aa26.5■■□□□ 1.83
C1galt1-201ENSMUST00000040159 Ccdc47Q9D024 483 aaKnown RBP26.49■■□□□ 1.83
C1galt1-201ENSMUST00000040159 Dhx16G3X8X0 1044 aaKnown RBP26.48■■□□□ 1.83
C1galt1-201ENSMUST00000040159 Calcoco2A2A6M5 331 aa26.47■■□□□ 1.83
C1galt1-201ENSMUST00000040159 Stard8Q8K031 1019 aa26.46■■□□□ 1.83
C1galt1-201ENSMUST00000040159 Kri1Q8VDQ9 704 aaKnown RBP26.46■■□□□ 1.83
C1galt1-201ENSMUST00000040159 Chmp7Q8R1T1 451 aa26.45■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Fyb1O35601 819 aa26.44■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Inpp5dQ9ES52 1191 aa26.44■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Phldb1Q6PDH0 1371 aaKnown RBP26.43■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Cald1E9QA15 768 aaKnown RBP26.43■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Eif2s2Q99L45 331 aaKnown RBP26.43■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Gpatch11Q3UFS4 262 aa26.42■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Carmil1Q6EDY6 1374 aa26.41■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Shroom4Q1W617 1475 aa26.41■■□□□ 1.82
C1galt1-201ENSMUST00000040159 MsnP26041 577 aaKnown RBP26.41■■□□□ 1.82
C1galt1-201ENSMUST00000040159 BccipQ9CWI3 316 aa26.4■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Smc4Q8CG47 1286 aa26.4■■□□□ 1.82
C1galt1-201ENSMUST00000040159 Usp47Q8BY87 1376 aa26.37■■□□□ 1.81
C1galt1-201ENSMUST00000040159 Gm21969J3QJZ1 289 aa26.37■■□□□ 1.81
C1galt1-201ENSMUST00000040159 Krt82Q99M74 516 aa26.37■■□□□ 1.81
C1galt1-201ENSMUST00000040159 GsdmaQ9EST1 446 aa26.36■■□□□ 1.81
C1galt1-201ENSMUST00000040159 Kif7B7ZNG0 1348 aa26.36■■□□□ 1.81
C1galt1-201ENSMUST00000040159 RdxP26043 583 aaKnown RBP26.34■■□□□ 1.81
C1galt1-201ENSMUST00000040159 Ipo9Q91YE6 1041 aa26.34■■□□□ 1.81
C1galt1-201ENSMUST00000040159 WrnO09053 1401 aa26.34■■□□□ 1.81
C1galt1-201ENSMUST00000040159 Irx3P81067 507 aa26.34■■□□□ 1.81
C1galt1-201ENSMUST00000040159 Soga1E1U8D0 1418 aa26.33■■□□□ 1.81
C1galt1-201ENSMUST00000040159 AU015836B2RUM3 263 aa26.33■■□□□ 1.81
C1galt1-201ENSMUST00000040159 G3bp1P97855 465 aaKnown RBP26.33■■□□□ 1.81
C1galt1-201ENSMUST00000040159 BcanQ61361 883 aa26.32■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Prm3Q62100 101 aa26.32■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Atp6v1dP57746 247 aa26.32■■□□□ 1.8
C1galt1-201ENSMUST00000040159 SlkO54988 1233 aa26.32■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Tpm3P21107 285 aaKnown RBP26.32■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Kiaa0754Q69ZZ9 979 aa26.3■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Rapgef2Q8CHG7 1496 aa26.3■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Cgnl1Q6AW69 1298 aa26.3■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Tnnt2P50752 301 aa26.29■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Eva1cP58659 440 aa26.29■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Tceal9Q9DD24 104 aa26.28■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Neurod6P48986 337 aa26.28■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Triml2E9PW10 424 aa26.28■■□□□ 1.8
C1galt1-201ENSMUST00000040159 ChgaP26339 463 aaKnown RBP26.28■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Rab11fip3Q8CHD8 1047 aa26.27■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Bcl2l13P59017 434 aa26.27■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Ylpm1Q9R0I7 1386 aaKnown RBP26.27■■□□□ 1.8
C1galt1-201ENSMUST00000040159 Atf3Q60765 181 aa26.26■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Sf3a1Q8K4Z5 791 aaKnown RBP26.26■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Cc2d2bA0A286YDU8 1405 aa26.25■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Sirt1Q923E4 737 aa26.25■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Ddx11Q6AXC6 880 aa26.25■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Fam184bQ0KK56 942 aa26.25■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Ccp110Q7TSH4 1004 aa26.25■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Sycp2Q9CUU3 1500 aa26.24■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Arid4aF8VPQ2 1261 aaKnown RBP26.22■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Zpr1Q62384 459 aa26.22■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Ttll5Q8CHB8 1328 aa26.22■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Tpm4Q6IRU2 248 aa26.21■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Paf1Q8K2T8 535 aa26.21■■□□□ 1.79
C1galt1-201ENSMUST00000040159 ErbinQ80TH2 1402 aa26.21■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Sytl4Q9R0Q1 673 aa26.21■■□□□ 1.79
C1galt1-201ENSMUST00000040159 UacaQ8CGB3 1411 aa26.21■■□□□ 1.79
C1galt1-201ENSMUST00000040159 FosbP13346 338 aa26.21■■□□□ 1.79
C1galt1-201ENSMUST00000040159 Chmp4cQ9D7F7 232 aa26.2■■□□□ 1.79
C1galt1-201ENSMUST00000040159 CftrP26361 1476 aa26.2■■□□□ 1.79
C1galt1-201ENSMUST00000040159 LrpprcQ6PB66 1392 aaKnown RBP26.2■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Nap1l3Q794H2 544 aa26.19■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Usp16Q99LG0 825 aa26.19■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Odf2A3KGV1 830 aaKnown RBP26.19■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Ncbp3Q8BZR9 615 aaKnown RBP26.19■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Tdrd9Q14BI7 1383 aa26.19■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Sf3b2Q3UJB0 878 aaKnown RBP26.19■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Filip1lQ6P6L0 1131 aa26.18■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Ccdc43Q9CR29 222 aaKnown RBP26.18■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Q8C5K5 320 aa26.18■■□□□ 1.78
C1galt1-201ENSMUST00000040159 CrcpO35427 148 aa26.17■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Tpm2P58774 284 aa26.17■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Dhx29Q6PGC1 1365 aaKnown RBP26.17■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Cecr2E9Q2Z1 1453 aa26.17■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Wdr78E9PYY5 807 aa26.17■■□□□ 1.78
C1galt1-201ENSMUST00000040159 Rock1P70335 1354 aa26.17■■□□□ 1.78
C1galt1-201ENSMUST00000040159 St18Q80TY4 1045 aa26.17■■□□□ 1.78
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms