RNA–Protein interactions for RNA: YPR124W

CTR1, Transcript of High-affinity copper transporter of the plasma membrane, yeast

Gene CTR1, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR1	YPR124W	MLC1	P53141	149 aa		4.21	□□□□□ -1.74
CTR1	YPR124W	TRM112	P53738	135 aa	Predicted RBP	4.21	□□□□□ -1.74
CTR1	YPR124W	ERP3	Q12403	225 aa		4.21	□□□□□ -1.74
CTR1	YPR124W	YDR524C-B	Q3E6R4	66 aa		4.21	□□□□□ -1.74
CTR1	YPR124W	NCB2	Q92317	146 aa		4.21	□□□□□ -1.74
CTR1	YPR124W	TUS1	Q06412	1307 aa		4.21	□□□□□ -1.74
CTR1	YPR124W	CDC50	P25656	391 aa		4.2	□□□□□ -1.74
CTR1	YPR124W	PHO88	P38264	188 aa	Predicted RBP	4.2	□□□□□ -1.74
CTR1	YPR124W	ALD5	P40047	520 aa	Known RBP	4.2	□□□□□ -1.74
CTR1	YPR124W	ABM1	P47146	123 aa		4.2	□□□□□ -1.74
CTR1	YPR124W	IPK1	Q06667	281 aa		4.2	□□□□□ -1.74
CTR1	YPR124W	FCY22	Q12119	530 aa		4.2	□□□□□ -1.74
CTR1	YPR124W	MYO1	P08964	1928 aa		4.2	□□□□□ -1.74
CTR1	YPR124W	RNA1	P11745	407 aa	Known RBP	4.19	□□□□□ -1.74
CTR1	YPR124W	MNE1	P24720	663 aa		4.19	□□□□□ -1.74
CTR1	YPR124W	IME2	P32581	645 aa		4.19	□□□□□ -1.74
CTR1	YPR124W	TIR2	P33890	251 aa		4.19	□□□□□ -1.74
CTR1	YPR124W	GEP4	P38812	185 aa		4.19	□□□□□ -1.74
CTR1	YPR124W	MNL1	P38888	796 aa		4.19	□□□□□ -1.74
CTR1	YPR124W	LDS2	Q08218	356 aa		4.19	□□□□□ -1.74
CTR1	YPR124W	DNL4	Q08387	944 aa	Predicted RBP	4.19	□□□□□ -1.74
CTR1	YPR124W	PCL9	Q12477	304 aa		4.19	□□□□□ -1.74
CTR1	YPR124W	SRN2	Q99176	213 aa		4.19	□□□□□ -1.74
CTR1	YPR124W	COX4	P04037	155 aa		4.18	□□□□□ -1.74
CTR1	YPR124W	POX1	P13711	748 aa		4.18	□□□□□ -1.74
CTR1	YPR124W	MDL1	P33310	695 aa		4.18	□□□□□ -1.74
CTR1	YPR124W	MYO3	P36006	1272 aa		4.18	□□□□□ -1.74
CTR1	YPR124W	KAP104	P38217	918 aa	Known RBP	4.18	□□□□□ -1.74
CTR1	YPR124W	YNL208W	P40159	199 aa	Known RBP	4.18	□□□□□ -1.74
CTR1	YPR124W	YDL199C	Q12407	687 aa		4.18	□□□□□ -1.74
CTR1	YPR124W	PUP2	P32379	260 aa		4.17	□□□□□ -1.74
CTR1	YPR124W	ANP1	P32629	500 aa		4.17	□□□□□ -1.74
CTR1	YPR124W	SPO23	P33757	523 aa		4.17	□□□□□ -1.74
CTR1	YPR124W	OPY1	P38271	328 aa		4.17	□□□□□ -1.74
CTR1	YPR124W	TVP23	P38962	199 aa		4.17	□□□□□ -1.74
CTR1	YPR124W	GDI1	P39958	451 aa	Known RBP	4.17	□□□□□ -1.74
CTR1	YPR124W	SPH1	Q06160	661 aa		4.17	□□□□□ -1.74
CTR1	YPR124W	NKP2	Q06162	153 aa		4.17	□□□□□ -1.74
CTR1	YPR124W	MEX67	Q99257	599 aa	Known RBP	4.17	□□□□□ -1.74
CTR1	YPR124W	PRB1	P09232	635 aa		4.16	□□□□□ -1.74
CTR1	YPR124W	MAS2	P11914	482 aa		4.16	□□□□□ -1.74
CTR1	YPR124W	RRP7	P25368	297 aa	Predicted RBP	4.16	□□□□□ -1.74
CTR1	YPR124W	IES6	P32617	166 aa		4.16	□□□□□ -1.74
CTR1	YPR124W	MID2	P36027	376 aa		4.16	□□□□□ -1.74
CTR1	YPR124W	SEC28	P40509	296 aa	Known RBP	4.16	□□□□□ -1.74
CTR1	YPR124W	AIP1	P46680	615 aa	Known RBP	4.16	□□□□□ -1.74
CTR1	YPR124W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
CTR1	YPR124W	LSM12	P38828	187 aa	Known RBP	4.15	□□□□□ -1.75
CTR1	YPR124W	YHR177W	P38867	453 aa		4.15	□□□□□ -1.75
CTR1	YPR124W	TIM17	P39515	158 aa		4.15	□□□□□ -1.75
CTR1	YPR124W	JEM1	P40358	645 aa		4.15	□□□□□ -1.75
CTR1	YPR124W	YIP5	P53108	310 aa		4.15	□□□□□ -1.75
CTR1	YPR124W	MRPS16	Q02608	121 aa		4.15	□□□□□ -1.75
CTR1	YPR124W	MYO5	Q04439	1219 aa	Known RBP	4.15	□□□□□ -1.75
CTR1	YPR124W	FKS1	P38631	1876 aa	Known RBP	4.14	□□□□□ -1.75
CTR1	YPR124W	ZRC1	P20107	442 aa		4.14	□□□□□ -1.75
CTR1	YPR124W	DEP1	P31385	405 aa		4.14	□□□□□ -1.75
CTR1	YPR124W	ECM8	P38246	354 aa		4.14	□□□□□ -1.75
CTR1	YPR124W	SPP381	P38282	291 aa	Predicted RBP	4.14	□□□□□ -1.75
CTR1	YPR124W	PGU1	P47180	361 aa		4.14	□□□□□ -1.75
CTR1	YPR124W	YHC1	Q05900	231 aa	Known RBP	4.14	□□□□□ -1.75
CTR1	YPR124W	RAD50	P12753	1312 aa		4.14	□□□□□ -1.75
CTR1	YPR124W	OPI1	P21957	404 aa		4.13	□□□□□ -1.75
CTR1	YPR124W	CHA1	P25379	360 aa	Known RBP	4.13	□□□□□ -1.75
CTR1	YPR124W	CAB3	P36076	571 aa		4.13	□□□□□ -1.75
CTR1	YPR124W	VPS45	P38932	577 aa		4.13	□□□□□ -1.75
CTR1	YPR124W	SEC27	P41811	889 aa	Known RBP	4.13	□□□□□ -1.75
CTR1	YPR124W	KEG1	P43614	200 aa		4.13	□□□□□ -1.75
CTR1	YPR124W	YPS5	P53057	165 aa		4.13	□□□□□ -1.75
CTR1	YPR124W	REX2	P54964	269 aa	Known RBP	4.13	□□□□□ -1.75
CTR1	YPR124W	YFH1	Q07540	174 aa		4.13	□□□□□ -1.75
CTR1	YPR124W	MAK31	P23059	88 aa		4.12	□□□□□ -1.75
CTR1	YPR124W	PFS1	P38872	237 aa		4.12	□□□□□ -1.75
CTR1	YPR124W	YFL040W	P43562	540 aa		4.12	□□□□□ -1.75
CTR1	YPR124W	TRF5	P48561	642 aa	Known RBP	4.12	□□□□□ -1.75
CTR1	YPR124W	YDL012C	Q12489	107 aa		4.12	□□□□□ -1.75
CTR1	YPR124W	GIT1	P25346	518 aa		4.11	□□□□□ -1.75
CTR1	YPR124W	GPI18	P38211	433 aa		4.11	□□□□□ -1.75
CTR1	YPR124W	SEO1	P39709	593 aa		4.11	□□□□□ -1.75
CTR1	YPR124W	IGD1	P43598	195 aa		4.11	□□□□□ -1.75
CTR1	YPR124W	VHS1	Q03785	461 aa		4.11	□□□□□ -1.75
CTR1	YPR124W	YPR078C	Q06813	372 aa		4.11	□□□□□ -1.75
CTR1	YPR124W	MCT1	Q12283	360 aa		4.11	□□□□□ -1.75
CTR1	YPR124W	RIF1	P29539	1916 aa		4.11	□□□□□ -1.75
CTR1	YPR124W	HSP82	P02829	709 aa	Known RBP	4.1	□□□□□ -1.75
CTR1	YPR124W	STE7	P06784	515 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	CBP6	P07253	162 aa	Predicted RBP	4.1	□□□□□ -1.75
CTR1	YPR124W	MRPL8	P22353	238 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	MSP1	P28737	362 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	MRPS9	P38120	278 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	EPL1	P43572	832 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	CIN2	P46670	268 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	LIF1	P53150	421 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	VHT1	P53241	593 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	MKC7	P53379	596 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	GAT3	Q07928	141 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	YBL111C	Q3E7Y5	667 aa		4.1	□□□□□ -1.75
CTR1	YPR124W	RPS18A	P0CX55	146 aa	Known RBP	4.09	□□□□□ -1.75
CTR1	YPR124W	RPS18B	P0CX56	146 aa	Predicted RBP	4.09	□□□□□ -1.75
CTR1	YPR124W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms