RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	AIM23	P47015	356 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	YGR015C	P53208	328 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	FRE8	Q12209	686 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	SFM1	Q12314	213 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	ERP4	Q12450	207 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	AUS1	Q08409	1394 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	STE7	P06784	515 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	AGA2	P32781	87 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	COS9	P36034	407 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	ECM34	P38728	170 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	LRP1	P38801	184 aa	Known RBP	0.63	□□□□□ -2.31
SEC8	YPR055W	AIP1	P46680	615 aa	Known RBP	0.63	□□□□□ -2.31
SEC8	YPR055W	YML6	P51998	286 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	SLT2	Q00772	484 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	API2	Q04413	109 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	YPR078C	Q06813	372 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	MMT2	Q08970	484 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	FRE6	Q12473	712 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	TY1B-BR	Q12193	1756 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	TY1B-GR3	Q12316	1755 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	TY1B-OR	Q92393	1755 aa		0.63	□□□□□ -2.31
SEC8	YPR055W	GDB1	Q06625	1536 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	LYS12	P40495	371 aa	Known RBP	0.62	□□□□□ -2.31
SEC8	YPR055W	SEC28	P40509	296 aa	Known RBP	0.62	□□□□□ -2.31
SEC8	YPR055W	COQ5	P49017	307 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	VHT1	P53241	593 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	YGR067C	P53243	804 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	SCS7	Q03529	384 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	TRM82	Q03774	444 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	DDC1	Q08949	612 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	FSH3	Q99369	266 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	BI3	Q9ZZW7	517 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	SSN2	P38931	1420 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	SPS100	P13130	326 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	MSK1	P32048	576 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	SPS19	P32573	292 aa	Known RBP	0.62	□□□□□ -2.31
SEC8	YPR055W	RXT2	P38255	430 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	LSM12	P38828	187 aa	Known RBP	0.62	□□□□□ -2.31
SEC8	YPR055W	MRX8	Q05473	314 aa		0.62	□□□□□ -2.31
SEC8	YPR055W	AIM45	Q12480	344 aa	Known RBP	0.62	□□□□□ -2.31
SEC8	YPR055W	SPA2	P23201	1466 aa	Known RBP	0.62	□□□□□ -2.31
SEC8	YPR055W	TPI1	P00942	248 aa	Known RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	BGL2	P15703	313 aa	Known RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	CKI1	P20485	582 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	FAR1	P21268	830 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	COX10	P21592	462 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	SPT6	P23615	1451 aa	Known RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	LDS1	P31379	325 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	TPS2	P31688	896 aa	Known RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	SPO14	P36126	1683 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	ADH5	P38113	351 aa	Known RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	SHE1	P38200	338 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	IML3	P38265	245 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	RCK2	P38623	610 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	YHR182W	P38870	785 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	LST7	P53237	242 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	NRM1	P53718	249 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	SUR7	P54003	302 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	INP1	Q03694	420 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	SXM1	Q04175	944 aa	Known RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	GLE1	Q12315	538 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	YRF1-3	P0CX14	1859 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	YRF1-7	P0CX15	1859 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	YRF1-6	P53819	1859 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	URB1	P34241	1764 aa	Known RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	ATG2	P53855	1592 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	MET5	P47169	1442 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	ECM5	Q03214	1411 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	STE3	P06783	470 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	UTR1	P21373	530 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	MRPL20	P22354	195 aa	Predicted RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	TAE1	P38340	232 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	YMR262W	P38430	313 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	BDH1	P39714	382 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	MLC1	P53141	149 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	HST4	P53688	370 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	CSM3	Q04659	317 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	SKG6	P32900	734 aa	Predicted RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	FRT2	P39734	528 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	YCH1	P42937	148 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	MOB2	P43563	287 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	RET3	P53600	189 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	UTP6	Q02354	440 aa	Known RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	NAT4	Q04751	285 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	ARR1	Q06596	294 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	PML1	Q07930	204 aa	Predicted RBP	0.61	□□□□□ -2.31
SEC8	YPR055W	TAF10	Q12030	206 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	SFG1	Q12507	346 aa		0.61	□□□□□ -2.31
SEC8	YPR055W	TY1B-H	O13535	1793 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-DR5	P0C2I2	1755 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-DR6	P0C2I3	1755 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-LR2	P0C2I5	1755 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-PR2	P0C2J0	1756 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-JR1	P47098	1755 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-ML2	Q03434	1755 aa	Known RBP	0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-ER1	Q03612	1755 aa		0.6	□□□□□ -2.31
SEC8	YPR055W	TY1B-ML1	Q04711	1755 aa	Known RBP	0.6	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms