RNA–Protein interactions for RNA: YPR013C

CMR3, Transcript of Putative zinc finger protein, yeast

Gene CMR3, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMR3	YPR013C	COX20	Q04935	205 aa		3.89	□□□□□ -1.79
CMR3	YPR013C	GMC2	Q06201	188 aa		3.89	□□□□□ -1.79
CMR3	YPR013C	ERP3	Q12403	225 aa		3.89	□□□□□ -1.79
CMR3	YPR013C	PCL9	Q12477	304 aa		3.89	□□□□□ -1.79
CMR3	YPR013C	HTZ1	Q12692	134 aa	Known RBP	3.89	□□□□□ -1.79
CMR3	YPR013C	YCR024C-B	Q3E7Z8	88 aa		3.89	□□□□□ -1.79
CMR3	YPR013C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
CMR3	YPR013C	CPR1	P14832	162 aa	Known RBP	3.88	□□□□□ -1.79
CMR3	YPR013C	POL30	P15873	258 aa	Known RBP	3.88	□□□□□ -1.79
CMR3	YPR013C	PET123	P17558	318 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	RPB4	P20433	221 aa	Predicted RBP	3.88	□□□□□ -1.79
CMR3	YPR013C	RVS161	P25343	265 aa	Known RBP	3.88	□□□□□ -1.79
CMR3	YPR013C	DPH5	P32469	300 aa	Predicted RBP	3.88	□□□□□ -1.79
CMR3	YPR013C	GCG1	P32656	232 aa	Known RBP	3.88	□□□□□ -1.79
CMR3	YPR013C	ZRT1	P32804	376 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	IMP3	P32899	183 aa	Predicted RBP	3.88	□□□□□ -1.79
CMR3	YPR013C	MSN4	P33749	630 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	YKT6	P36015	200 aa	Known RBP	3.88	□□□□□ -1.79
CMR3	YPR013C	PRM9	P39551	298 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	AGP3	P43548	558 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	YJL118W	P47022	219 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	SED5	Q01590	340 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	IRC4	Q03036	179 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	CTS2	Q06350	511 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	SMC5	Q08204	1093 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	DAP1	Q12091	152 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	EAF3	Q12432	401 aa		3.88	□□□□□ -1.79
CMR3	YPR013C	HEM15	P16622	393 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	SEC1	P30619	724 aa	Known RBP	3.87	□□□□□ -1.79
CMR3	YPR013C	PRO3	P32263	286 aa	Known RBP	3.87	□□□□□ -1.79
CMR3	YPR013C	ARO4	P32449	370 aa	Known RBP	3.87	□□□□□ -1.79
CMR3	YPR013C	MEI5	P32489	222 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	KAR9	P32526	644 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	DOA4	P32571	926 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	SUA5	P32579	426 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	ECM8	P38246	354 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	YHR035W	P38769	630 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	TDA11	P38854	504 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	MAM33	P40513	266 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	YFL067W	P43537	175 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	SAD1	P43589	448 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	YAR1	P46683	200 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	MNT4	P53745	580 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	HCH1	P53834	153 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	NUP116	Q02630	1113 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	YMR010W	Q03687	405 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	BSC6	Q08280	497 aa		3.87	□□□□□ -1.79
CMR3	YPR013C	COX2	P00410	251 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	CWP1	P28319	239 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	AGA1	P32323	725 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
CMR3	YPR013C	DTR1	P38125	572 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	AVT5	P38176	459 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	SMF2	P38778	549 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	YER085C	P40058	173 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	SLM1	P40485	686 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	DFG10	P40526	253 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	YNL320W	P42840	284 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	NCA3	P46955	337 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	CTK3	P46963	296 aa	Predicted RBP	3.86	□□□□□ -1.79
CMR3	YPR013C	LCB3	P47013	409 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	COS10	P52924	374 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	LSG1	P53145	640 aa	Known RBP	3.86	□□□□□ -1.79
CMR3	YPR013C	TIM21	P53220	239 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	SRL1	Q08673	210 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	APC9	Q12107	265 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	SAC3	P46674	1301 aa		3.86	□□□□□ -1.79
CMR3	YPR013C	ATP6	P00854	259 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	RAD3	P06839	778 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	VPS3	P23643	1011 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	YCR016W	P25617	290 aa	Known RBP	3.85	□□□□□ -1.79
CMR3	YPR013C	RPL16A	P26784	199 aa	Known RBP	3.85	□□□□□ -1.79
CMR3	YPR013C	PRR1	P28708	518 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	PRS1	P32895	427 aa	Known RBP	3.85	□□□□□ -1.79
CMR3	YPR013C	SPO23	P33757	523 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	BMH2	P34730	273 aa	Known RBP	3.85	□□□□□ -1.79
CMR3	YPR013C	RTR1	P40084	226 aa	Predicted RBP	3.85	□□□□□ -1.79
CMR3	YPR013C	WWM1	P43582	211 aa	Known RBP	3.85	□□□□□ -1.79
CMR3	YPR013C	WSC2	P53832	503 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	YPL077C	Q02831	240 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	TDA1	Q03533	586 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	YMR209C	Q03648	457 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	INP2	Q03824	705 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	IZH4	Q99393	312 aa		3.85	□□□□□ -1.79
CMR3	YPR013C	ADH2	P00331	348 aa	Known RBP	3.84	□□□□□ -1.79
CMR3	YPR013C	CYC3	P06182	269 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	VPS1	P21576	704 aa	Known RBP	3.84	□□□□□ -1.79
CMR3	YPR013C	DAL82	P21705	255 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	MCK1	P21965	375 aa	Known RBP	3.84	□□□□□ -1.79
CMR3	YPR013C	YKL071W	P36086	256 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	MDM31	P38880	579 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	SHQ1	P40486	507 aa	Predicted RBP	3.84	□□□□□ -1.79
CMR3	YPR013C	YJL213W	P40896	331 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	HAC1	P41546	238 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	YGR210C	P42942	411 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	YFL040W	P43562	540 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	MSO1	P53604	210 aa	Known RBP	3.84	□□□□□ -1.79
CMR3	YPR013C	YMR027W	Q04371	470 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	YPR091C	Q06833	770 aa		3.84	□□□□□ -1.79
CMR3	YPR013C	ASR1	Q06834	288 aa		3.84	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms