RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	ACL4	Q03771	387 aa		4.25	□□□□□ -1.73
YDC1	YPL087W	GGA1	Q06336	557 aa		4.25	□□□□□ -1.73
YDC1	YPL087W	YOL019W	Q08157	551 aa		4.25	□□□□□ -1.73
YDC1	YPL087W	ESA1	Q08649	445 aa		4.25	□□□□□ -1.73
YDC1	YPL087W	RNA14	P25298	677 aa	Known RBP	4.24	□□□□□ -1.73
YDC1	YPL087W	CSM1	P25651	190 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	YME2	P32843	850 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	DRE2	P36152	348 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	KAP104	P38217	918 aa	Known RBP	4.24	□□□□□ -1.73
YDC1	YPL087W	PHO89	P38361	574 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	TVP23	P38962	199 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	YEL028W	P39989	153 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	GCD10	P41814	478 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	RRT5	P43607	289 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	GCD14	P46959	383 aa	Predicted RBP	4.24	□□□□□ -1.73
YDC1	YPL087W	YIP1	P53039	248 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	KTR6	P54070	446 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	MMT1	Q03218	510 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	YDR387C	Q04162	555 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	SEC10	Q06245	871 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	LDB18	Q07887	179 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	SGT1	Q08446	395 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	DDC1	Q08949	612 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	YPR202W	Q08993	238 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	YLR108C	Q12259	485 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	ADF1	Q2V2Q1	113 aa		4.24	□□□□□ -1.73
YDC1	YPL087W	ADE4	P04046	510 aa	Known RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	RPL24A	P04449	155 aa	Known RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	ATP1	P07251	545 aa	Known RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	SPT15	P13393	240 aa	Known RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	AAT2	P23542	418 aa	Known RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	YCR090C	P25654	182 aa	Known RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	DEG1	P31115	442 aa	Known RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	AEP1	P32493	518 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	ECM25	P32525	599 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	SDH3	P33421	198 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	YBL059W	P34224	193 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	YCR041W	P37265	110 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	HMT1	P38074	348 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	MRP21	P38175	177 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	TRM5	P38793	499 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	MEP1	P40260	492 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	VMA13	P41807	478 aa	Known RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	PCP1	P53259	346 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	NOP19	P53317	196 aa	Predicted RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	PET117	Q02771	107 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	YDR476C	Q03362	224 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	YMR209C	Q03648	457 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	INP2	Q03824	705 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	SPC2	Q04969	178 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	REX4	Q08237	289 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	PGC1	Q08959	321 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	PKH2	Q12236	1081 aa	Known RBP	4.23	□□□□□ -1.73
YDC1	YPL087W	LDB17	Q12342	491 aa		4.23	□□□□□ -1.73
YDC1	YPL087W	CBP2	P03874	630 aa	Predicted RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	RIP1	P08067	215 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	SEC63	P14906	663 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	MET16	P18408	261 aa	Predicted RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	RPI1	P23250	407 aa	Known RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	PHO91	P27514	894 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	YIM1	P28625	365 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	ZIP1	P31111	875 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	CSE2	P33308	149 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	AST1	P35183	429 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	TDA11	P38854	504 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	EDC3	P39998	551 aa	Known RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	MMF1	P40185	145 aa	Known RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	PDS1	P40316	373 aa	Predicted RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	CHS6	P40955	746 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	SSU1	P41930	458 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	YGR016W	P53209	190 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	RIP-Chip
YDC1	YPL087W	LSM3	P57743	89 aa	Known RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	TMA20	P89886	181 aa	Predicted RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	OSH6	Q02201	448 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	YMR226C	Q05016	267 aa	Known RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
YDC1	YPL087W	UAF30	Q08747	228 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	RRP12	Q12754	1228 aa	Known RBP	4.22	□□□□□ -1.73
YDC1	YPL087W	SAS5	Q99314	248 aa		4.22	□□□□□ -1.73
YDC1	YPL087W	RSR1	P13856	272 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	YAK1	P14680	807 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	KSS1	P14681	368 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	ARO2	P28777	376 aa	Known RBP	4.21	□□□□□ -1.74
YDC1	YPL087W	COX13	P32799	129 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	ECM13	P38195	257 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	ATG12	P38316	186 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	YHI9	P38765	294 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	STN1	P38960	494 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	FHL1	P39521	936 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	ATM1	P40416	690 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	MAM33	P40513	266 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	SNL1	P40548	159 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	ASG7	P46993	209 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	EFM5	P53200	248 aa	Known RBP	4.21	□□□□□ -1.74
YDC1	YPL087W	GTR2	P53290	341 aa		4.21	□□□□□ -1.74
YDC1	YPL087W	YIF1	P53845	314 aa	Known RBP	4.21	□□□□□ -1.74
YDC1	YPL087W	YNL010W	P53981	241 aa	Known RBP	4.21	□□□□□ -1.74
YDC1	YPL087W	PRO2	P54885	456 aa	Known RBP	4.21	□□□□□ -1.74
YDC1	YPL087W	SPP2	Q02521	185 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms