RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W LDS1P31379 325 aa1.93□□□□□ -2.1
BRO1YPL084W DEP1P31385 405 aa1.93□□□□□ -2.1
BRO1YPL084W YCH1P42937 148 aa1.93□□□□□ -2.1
BRO1YPL084W IGD1P43598 195 aa1.93□□□□□ -2.1
BRO1YPL084W NAS6P50086 228 aa1.93□□□□□ -2.1
BRO1YPL084W TRM82Q03774 444 aa1.93□□□□□ -2.1
BRO1YPL084W MGR3Q04472 501 aa1.93□□□□□ -2.1
BRO1YPL084W YLR177WQ06251 628 aa1.93□□□□□ -2.1
BRO1YPL084W FRE8Q12209 686 aa1.93□□□□□ -2.1
BRO1YPL084W SFM1Q12314 213 aa1.93□□□□□ -2.1
BRO1YPL084W COX4P04037 155 aa1.93□□□□□ -2.1
BRO1YPL084W STE7P06784 515 aa1.93□□□□□ -2.1
BRO1YPL084W MIR1P23641 311 aaKnown RBP1.93□□□□□ -2.1
BRO1YPL084W GPI18P38211 433 aa1.93□□□□□ -2.1
BRO1YPL084W PES4P39684 611 aa1.93□□□□□ -2.1
BRO1YPL084W BTT1P40314 149 aaPredicted RBP1.93□□□□□ -2.1
BRO1YPL084W AIM20P40451 204 aa1.93□□□□□ -2.1
BRO1YPL084W YNL320WP42840 284 aa1.93□□□□□ -2.1
BRO1YPL084W BUR2Q05949 395 aa1.93□□□□□ -2.1
BRO1YPL084W STE23Q06010 1027 aa1.93□□□□□ -2.1
BRO1YPL084W SLM3Q12093 417 aa1.93□□□□□ -2.1
BRO1YPL084W SOL2P37262 315 aa1.92□□□□□ -2.1
BRO1YPL084W PEX32P38292 413 aa1.92□□□□□ -2.1
BRO1YPL084W RCK2P38623 610 aa1.92□□□□□ -2.1
BRO1YPL084W YDR089WP38966 869 aa1.92□□□□□ -2.1
BRO1YPL084W AIM23P47015 356 aa1.92□□□□□ -2.1
BRO1YPL084W CDH1P53197 566 aa1.92□□□□□ -2.1
BRO1YPL084W TSA2Q04120 196 aa1.92□□□□□ -2.1
BRO1YPL084W VPS20Q04272 221 aa1.92□□□□□ -2.1
BRO1YPL084W DNL4Q08387 944 aaPredicted RBP1.92□□□□□ -2.1
BRO1YPL084W YOR376WQ08900 122 aa1.92□□□□□ -2.1
BRO1YPL084W MDY2Q12285 212 aa1.92□□□□□ -2.1
BRO1YPL084W VPS63O13549 108 aa1.92□□□□□ -2.1
BRO1YPL084W RPL18AP0CX49 186 aaKnown RBP1.92□□□□□ -2.1
BRO1YPL084W RPL18BP0CX50 186 aaKnown RBP1.92□□□□□ -2.1
BRO1YPL084W UNG1P12887 359 aa1.92□□□□□ -2.1
BRO1YPL084W HSP26P15992 214 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1 RIP-Chip
BRO1YPL084W VMA5P31412 392 aaKnown RBP1.92□□□□□ -2.1
BRO1YPL084W COS9P36034 407 aa1.92□□□□□ -2.1
BRO1YPL084W YBR241CP38142 488 aa1.92□□□□□ -2.1
BRO1YPL084W MMS21P38632 267 aa1.92□□□□□ -2.1
BRO1YPL084W PGU1P47180 361 aa1.92□□□□□ -2.1
BRO1YPL084W SEH1P53011 349 aaKnown RBP1.92□□□□□ -2.1
BRO1YPL084W SLT2Q00772 484 aa1.92□□□□□ -2.1
BRO1YPL084W MRPS16Q02608 121 aa1.92□□□□□ -2.1
BRO1YPL084W YDR115WQ04598 105 aa1.92□□□□□ -2.1
BRO1YPL084W APC2Q12440 853 aa1.92□□□□□ -2.1
BRO1YPL084W CDC37P06101 506 aaKnown RBP1.91□□□□□ -2.1
BRO1YPL084W ERG9P29704 444 aa1.91□□□□□ -2.1
BRO1YPL084W END3P39013 349 aa1.91□□□□□ -2.1
BRO1YPL084W SSO2P39926 295 aa1.91□□□□□ -2.1
BRO1YPL084W LSG1P53145 640 aaKnown RBP1.91□□□□□ -2.1
BRO1YPL084W SUR7P54003 302 aa1.91□□□□□ -2.1
BRO1YPL084W YLR297WQ05899 129 aa1.91□□□□□ -2.1
BRO1YPL084W RPL21BQ12672 160 aaKnown RBP1.91□□□□□ -2.1
BRO1YPL084W YPS1P32329 569 aa1.91□□□□□ -2.1
BRO1YPL084W TOA1P32773 286 aa1.91□□□□□ -2.1
BRO1YPL084W MOB2P43563 287 aa1.91□□□□□ -2.1
BRO1YPL084W BIO3P50277 480 aa1.91□□□□□ -2.1
BRO1YPL084W TAF6P53040 516 aa1.91□□□□□ -2.1
BRO1YPL084W YPS5P53057 165 aa1.91□□□□□ -2.1
BRO1YPL084W YGR168CP53293 376 aa1.91□□□□□ -2.1
BRO1YPL084W CAB5Q03941 241 aa1.91□□□□□ -2.1
BRO1YPL084W DDC1Q08949 612 aa1.91□□□□□ -2.1
BRO1YPL084W RPN6Q12377 434 aa1.91□□□□□ -2.1
BRO1YPL084W FOL3Q12676 427 aaPredicted RBP1.91□□□□□ -2.1
BRO1YPL084W CBP2P03874 630 aaPredicted RBP1.9□□□□□ -2.1
BRO1YPL084W PDC2P32896 925 aa1.9□□□□□ -2.1
BRO1YPL084W PCH2P38126 564 aa1.9□□□□□ -2.1
BRO1YPL084W BMT2P38278 337 aa1.9□□□□□ -2.1
BRO1YPL084W SWC5P38326 303 aa1.9□□□□□ -2.1
BRO1YPL084W STB1P42845 420 aa1.9□□□□□ -2.1
BRO1YPL084W YFR018CP43599 363 aa1.9□□□□□ -2.1
BRO1YPL084W PXR1P53335 271 aaPredicted RBP1.9□□□□□ -2.1
BRO1YPL084W MKC7P53379 596 aa1.9□□□□□ -2.1
BRO1YPL084W HIF1Q12373 385 aa1.9□□□□□ -2.1
BRO1YPL084W DCC1P25559 380 aa1.9□□□□□ -2.11
BRO1YPL084W SMF2P38778 549 aa1.9□□□□□ -2.11
BRO1YPL084W PEX22P39718 180 aa1.9□□□□□ -2.11
BRO1YPL084W ALD5P40047 520 aaKnown RBP1.9□□□□□ -2.11
BRO1YPL084W YJR054WP47114 497 aa1.9□□□□□ -2.11
BRO1YPL084W YGL262WP53054 175 aa1.9□□□□□ -2.11
BRO1YPL084W YGR015CP53208 328 aa1.9□□□□□ -2.11
BRO1YPL084W HCH1P53834 153 aa1.9□□□□□ -2.11
BRO1YPL084W KTR6P54070 446 aa1.9□□□□□ -2.11
BRO1YPL084W RVB1Q03940 463 aaKnown RBP1.9□□□□□ -2.11
BRO1YPL084W TAF10Q12030 206 aa1.9□□□□□ -2.11
BRO1YPL084W SRO7Q12038 1033 aa1.9□□□□□ -2.11
BRO1YPL084W YOR093CQ12275 1648 aa1.9□□□□□ -2.11
BRO1YPL084W SAL1D6W196 494 aa1.89□□□□□ -2.11
BRO1YPL084W PET18P25362 215 aa1.89□□□□□ -2.11
BRO1YPL084W BUD2P33314 1104 aa1.89□□□□□ -2.11
BRO1YPL084W VHT1P53241 593 aa1.89□□□□□ -2.11
BRO1YPL084W RMI1Q02685 241 aa1.89□□□□□ -2.11
BRO1YPL084W CUR1Q06469 252 aa1.89□□□□□ -2.11
BRO1YPL084W PSK1P31374 1356 aa1.89□□□□□ -2.11
BRO1YPL084W URA10P30402 227 aa1.89□□□□□ -2.11
BRO1YPL084W ITR2P30606 609 aa1.89□□□□□ -2.11
BRO1YPL084W PRS1P32895 427 aaKnown RBP1.89□□□□□ -2.11
BRO1YPL084W MRPL27P36526 146 aaPredicted RBP1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms