RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	PEP4	P07267	405 aa	Known RBP	3.67	□□□□□ -1.82
NCR1	YPL006W	YOL162W	P0CF19	215 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	RPL3	P14126	387 aa	Known RBP	3.67	□□□□□ -1.82
NCR1	YPL006W	HCM1	P25364	564 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	YJU2	P28320	278 aa	Predicted RBP	3.67	□□□□□ -1.82
NCR1	YPL006W	YKL077W	P36081	392 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	APL3	P38065	1025 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	YHR097C	P38809	366 aa	Known RBP	3.67	□□□□□ -1.82
NCR1	YPL006W	RGA1	P39083	1007 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	PTI1	P39927	425 aa	Predicted RBP	3.67	□□□□□ -1.82
NCR1	YPL006W	TIR3	P40552	269 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	MAD2	P40958	196 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	PMT5	P52867	743 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	HOS2	P53096	452 aa	Predicted RBP	3.67	□□□□□ -1.82
NCR1	YPL006W	TUB4	P53378	473 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	YNR021W	P53723	404 aa	Known RBP	3.67	□□□□□ -1.82
NCR1	YPL006W	CWC25	P53854	179 aa	Known RBP	3.67	□□□□□ -1.82
NCR1	YPL006W	TMN2	Q04562	672 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	YMR252C	Q04814	134 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	RRP40	Q08285	240 aa	Known RBP	3.67	□□□□□ -1.82
NCR1	YPL006W	TPO4	Q12256	659 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	FRE6	Q12473	712 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	PSF1	Q12488	208 aa		3.67	□□□□□ -1.82
NCR1	YPL006W	GCN4	P03069	281 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	CAN1	P04817	590 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	STE12	P13574	688 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	SLY41	P22215	453 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	APN1	P22936	367 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	YCP4	P25349	247 aa	Known RBP	3.66	□□□□□ -1.82
NCR1	YPL006W	CAM1	P29547	415 aa	Known RBP	3.66	□□□□□ -1.82
NCR1	YPL006W	FUN26	P31381	517 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	KRE6	P32486	720 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	OSH7	P38755	437 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	MNT3	P40549	630 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	RPS12	P48589	143 aa	Known RBP	3.66	□□□□□ -1.82
NCR1	YPL006W	TGL2	P54857	326 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	PRM15	Q03262	622 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	RSM28	Q03430	361 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	YMR130W	Q04223	302 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	ROY1	Q04847	553 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	GAS2	Q06135	555 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	ATP16	Q12165	160 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	YOL107W	Q12239	342 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	PDH1	Q12428	516 aa	Known RBP	3.66	□□□□□ -1.82
NCR1	YPL006W	ACB1	P31787	87 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	DOA4	P32571	926 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	SFC1	P33303	322 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	3.66	□□□□□ -1.82	not detected
NCR1	YPL006W	YHR122W	P38829	231 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	YNL195C	P40168	261 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	TED1	P40533	473 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	SPT20	P50875	604 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	COS10	P52924	374 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	ERG26	P53199	349 aa	Known RBP	3.66	□□□□□ -1.82
NCR1	YPL006W	YDR541C	Q03049	344 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	SCS7	Q03529	384 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	YDR249C	Q03787	373 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	UTP21	Q06078	939 aa	Predicted RBP	3.66	□□□□□ -1.82
NCR1	YPL006W	KEI1	Q06346	221 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	ATG10	Q07879	167 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	SYC1	Q08553	188 aa	Predicted RBP	3.66	□□□□□ -1.82
NCR1	YPL006W	VPS68	Q12016	184 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	SKS1	Q12505	502 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	YHR213W-A	Q8TGT4	77 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	DSF1	P0CX08	502 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	YNR073C	P0CX09	502 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	CNB1	P25296	175 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	ARC19	P33204	171 aa	Known RBP	3.66	□□□□□ -1.82
NCR1	YPL006W	DOA1	P36037	715 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	FMP10	P40098	244 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	BNA6	P43619	295 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	RSM7	P47150	247 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	INN1	P53901	409 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	AEP3	Q12089	606 aa		3.66	□□□□□ -1.82
NCR1	YPL006W	PNO1	Q99216	274 aa	Known RBP	3.66	□□□□□ -1.82
NCR1	YPL006W	YBR085C-A	O43137	85 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	INH1	P01097	85 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	SEC12	P11655	471 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	CBS1	P14066	229 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	RNA14	P25298	677 aa	Known RBP	3.65	□□□□□ -1.82
NCR1	YPL006W	ADE1	P27616	306 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	ECT1	P33412	323 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	DTR1	P38125	572 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	BAP3	P41815	604 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	DPB11	P47027	764 aa	Predicted RBP	3.65	□□□□□ -1.82
NCR1	YPL006W	DOC1	P53068	250 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	VOA1	P53262	265 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	YKR011C	Q02209	353 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	RRN11	Q04712	507 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	INP53	Q12271	1107 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	YDL007C-A	Q2V2Q0	85 aa		3.65	□□□□□ -1.82
NCR1	YPL006W	ARG80	P07249	177 aa		3.65	□□□□□ -1.83
NCR1	YPL006W	YKR104W	P0CE69	306 aa		3.65	□□□□□ -1.83
NCR1	YPL006W	PRP2	P20095	876 aa	Predicted RBP	3.65	□□□□□ -1.83
NCR1	YPL006W	RAM1	P22007	431 aa		3.65	□□□□□ -1.83
NCR1	YPL006W	HXT2	P23585	541 aa		3.65	□□□□□ -1.83
NCR1	YPL006W	YCL002C	P25565	263 aa		3.65	□□□□□ -1.83
NCR1	YPL006W	ATS1	P31386	333 aa		3.65	□□□□□ -1.83
NCR1	YPL006W	ERG1	P32476	496 aa	Known RBP	3.65	□□□□□ -1.83
NCR1	YPL006W	PDR3	P33200	976 aa		3.65	□□□□□ -1.83

Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms