RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	YMR010W	Q03687	405 aa		3.22	□□□□□ -1.89
CAF20	YOR276W	UBX2	Q04228	584 aa		3.22	□□□□□ -1.89
CAF20	YOR276W	RRN11	Q04712	507 aa		3.22	□□□□□ -1.89
CAF20	YOR276W	YTH1	Q06102	208 aa	Predicted RBP	3.22	□□□□□ -1.89
CAF20	YOR276W	RIF2	Q06208	395 aa		3.22	□□□□□ -1.89
CAF20	YOR276W	YDL199C	Q12407	687 aa		3.22	□□□□□ -1.89
CAF20	YOR276W	TDH1	P00360	332 aa	Known RBP	3.21	□□□□□ -1.9
CAF20	YOR276W	MSI1	P13712	422 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	ITR2	P30606	609 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	FUN26	P31381	517 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	ACB1	P31787	87 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	COT1	P32798	439 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	RPT5	P33297	434 aa	Known RBP	3.21	□□□□□ -1.9
CAF20	YOR276W	CSE2	P33308	149 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	YBL059W	P34224	193 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	SMC2	P38989	1170 aa	Known RBP	3.21	□□□□□ -1.9
CAF20	YOR276W	SCC4	P40090	624 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	YNL320W	P42840	284 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	YGL260W	P53056	76 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	MST27	P53176	234 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	YGR266W	P53326	701 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	MKC7	P53379	596 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	REX2	P54964	269 aa	Known RBP	3.21	□□□□□ -1.9
CAF20	YOR276W	ELP3	Q02908	557 aa	Known RBP	3.21	□□□□□ -1.9
CAF20	YOR276W	YDL114W	Q07530	308 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	ALE1	Q08548	619 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	YDL109C	Q12103	647 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	SIA1	Q12212	622 aa		3.21	□□□□□ -1.9
CAF20	YOR276W	HHF1	P02309	103 aa	Known RBP	3.2	□□□□□ -1.9
CAF20	YOR276W	RPS14A	P06367	137 aa	Known RBP	3.2	□□□□□ -1.9
CAF20	YOR276W	PHO2	P07269	559 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	RPL23A	P0CX41	137 aa	Known RBP	3.2	□□□□□ -1.9
CAF20	YOR276W	RPL23B	P0CX42	137 aa	Known RBP	3.2	□□□□□ -1.9
CAF20	YOR276W	RPS18A	P0CX55	146 aa	Known RBP	3.2	□□□□□ -1.9
CAF20	YOR276W	RPS18B	P0CX56	146 aa	Predicted RBP	3.2	□□□□□ -1.9
CAF20	YOR276W	YKR015C	P36111	568 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	RPS14B	P39516	138 aa	Known RBP	3.2	□□□□□ -1.9
CAF20	YOR276W	RCY1	P39531	840 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	EGT2	P42835	1041 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	AGX1	P43567	385 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	YGL242C	P53066	181 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	SHY1	P53266	389 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	OKP1	P53298	406 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	BIO4	P53630	237 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	TIM11	P81449	96 aa	Predicted RBP	3.2	□□□□□ -1.9
CAF20	YOR276W	DDC1	Q08949	612 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	SLM3	Q12093	417 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	YOL107W	Q12239	342 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	ERV2	Q12284	196 aa		3.2	□□□□□ -1.9
CAF20	YOR276W	PRP46	Q12417	451 aa	Predicted RBP	3.2	□□□□□ -1.9
CAF20	YOR276W	HEM4	P06174	275 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	DAL2	P25335	343 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	MEI5	P32489	222 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	ZRT1	P32804	376 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	SWD2	P36104	329 aa	Predicted RBP	3.19	□□□□□ -1.9
CAF20	YOR276W	RFS1	P38234	210 aa	Known RBP	3.19	□□□□□ -1.9
CAF20	YOR276W	HEM14	P40012	539 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	PAN6	P40459	309 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	FMP33	P46998	180 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	COX16	P47081	118 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	SEH1	P53011	349 aa	Known RBP	3.19	□□□□□ -1.9
CAF20	YOR276W	HCH1	P53834	153 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	IRC4	Q03036	179 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	TRM82	Q03774	444 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	ATC1	Q04005	294 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	YHC1	Q05900	231 aa	Known RBP	3.19	□□□□□ -1.9
CAF20	YOR276W	BCP1	Q06338	283 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	MFG1	Q07684	458 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	FRE8	Q12209	686 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	RPN6	Q12377	434 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	YMR230W-A	Q3E7B5	62 aa		3.19	□□□□□ -1.9
CAF20	YOR276W	SAL1	D6W196	494 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	NAM9	P27929	486 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	RCK2	P38623	610 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	HIS2	P38635	335 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	CTM1	P38818	585 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	PTI1	P39927	425 aa	Predicted RBP	3.18	□□□□□ -1.9
CAF20	YOR276W	YNL208W	P40159	199 aa	Known RBP	3.18	□□□□□ -1.9
CAF20	YOR276W	SLM1	P40485	686 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	YFR057W	P43625	151 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	BIR1	P47134	954 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	KEL2	P50090	882 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	NUP84	P52891	726 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	SHE10	P53075	577 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	SPP2	Q02521	185 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	RNH1	Q04740	348 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	SCW10	Q04951	389 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	HRI1	Q05905	244 aa	Known RBP	3.18	□□□□□ -1.9
CAF20	YOR276W	TY3A-G	Q12173	290 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	ERP3	Q12403	225 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	IZH2	Q12442	317 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	TY3A-I	Q99219	290 aa		3.18	□□□□□ -1.9
CAF20	YOR276W	SPS100	P13130	326 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	SPT15	P13393	240 aa	Known RBP	3.17	□□□□□ -1.9
CAF20	YOR276W	PET123	P17558	318 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	PMT2	P31382	759 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	IME2	P32581	645 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	YGR210C	P42942	411 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	YFL040W	P43562	540 aa		3.17	□□□□□ -1.9
CAF20	YOR276W	YJL118W	P47022	219 aa		3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms