RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFI1	YOR156C	ATP16	Q12165	160 aa		4.09	□□□□□ -1.75
NFI1	YOR156C	SAL1	D6W196	494 aa		4.09	□□□□□ -1.76
NFI1	YOR156C	DCC1	P25559	380 aa		4.09	□□□□□ -1.76
NFI1	YOR156C	SWC5	P38326	303 aa		4.09	□□□□□ -1.76
NFI1	YOR156C	MNN9	P39107	395 aa	Known RBP	4.09	□□□□□ -1.76
NFI1	YOR156C	LOC1	P43586	204 aa	Predicted RBP	4.09	□□□□□ -1.76
NFI1	YOR156C	RIB4	P50861	169 aa	Predicted RBP	4.09	□□□□□ -1.76
NFI1	YOR156C	SUR7	P54003	302 aa		4.09	□□□□□ -1.76
NFI1	YOR156C	REV1	P12689	985 aa		4.08	□□□□□ -1.76
NFI1	YOR156C	MSS116	P15424	664 aa	Known RBP	4.08	□□□□□ -1.76
NFI1	YOR156C	BUD2	P33314	1104 aa		4.08	□□□□□ -1.76
NFI1	YOR156C	TIM17	P39515	158 aa		4.08	□□□□□ -1.76
NFI1	YOR156C	YFR018C	P43599	363 aa		4.08	□□□□□ -1.76
NFI1	YOR156C	TAF6	P53040	516 aa		4.08	□□□□□ -1.76
NFI1	YOR156C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
NFI1	YOR156C	LIP2	Q06005	328 aa		4.08	□□□□□ -1.76
NFI1	YOR156C	RPN6	Q12377	434 aa		4.08	□□□□□ -1.76
NFI1	YOR156C	HMS1	Q12398	434 aa		4.08	□□□□□ -1.76
NFI1	YOR156C	PAA1	Q12447	191 aa	Known RBP	4.08	□□□□□ -1.76
NFI1	YOR156C	VMA5	P31412	392 aa	Known RBP	4.07	□□□□□ -1.76
NFI1	YOR156C	PFS1	P38872	237 aa		4.07	□□□□□ -1.76
NFI1	YOR156C	PCL7	P40186	285 aa		4.07	□□□□□ -1.76
NFI1	YOR156C	TIS11	P47977	285 aa		4.07	□□□□□ -1.76
NFI1	YOR156C	SEH1	P53011	349 aa	Known RBP	4.07	□□□□□ -1.76
NFI1	YOR156C	END3	P39013	349 aa		4.07	□□□□□ -1.76
NFI1	YOR156C	CWC22	P53333	577 aa	Known RBP	4.07	□□□□□ -1.76
NFI1	YOR156C	RVB1	Q03940	463 aa	Known RBP	4.07	□□□□□ -1.76
NFI1	YOR156C	TSA2	Q04120	196 aa		4.07	□□□□□ -1.76
NFI1	YOR156C	BUR2	Q05949	395 aa		4.07	□□□□□ -1.76
NFI1	YOR156C	DNL4	Q08387	944 aa	Predicted RBP	4.07	□□□□□ -1.76
NFI1	YOR156C	ZRC1	P20107	442 aa		4.06	□□□□□ -1.76
NFI1	YOR156C	LDS1	P31379	325 aa		4.06	□□□□□ -1.76
NFI1	YOR156C	DEP1	P31385	405 aa		4.06	□□□□□ -1.76
NFI1	YOR156C	AIM23	P47015	356 aa		4.06	□□□□□ -1.76
NFI1	YOR156C	PGU1	P47180	361 aa		4.06	□□□□□ -1.76
NFI1	YOR156C	PXR1	P53335	271 aa	Predicted RBP	4.06	□□□□□ -1.76
NFI1	YOR156C	DBP6	P53734	629 aa	Known RBP	4.06	□□□□□ -1.76
NFI1	YOR156C	FSH2	Q05015	223 aa		4.06	□□□□□ -1.76
NFI1	YOR156C	YOR376W	Q08900	122 aa		4.06	□□□□□ -1.76
NFI1	YOR156C	RPS14A	P06367	137 aa	Known RBP	4.06	□□□□□ -1.76
NFI1	YOR156C	RPS14B	P39516	138 aa	Known RBP	4.06	□□□□□ -1.76
NFI1	YOR156C	DFG10	P40526	253 aa		4.06	□□□□□ -1.76
NFI1	YOR156C	CDC40	P40968	455 aa	Predicted RBP	4.06	□□□□□ -1.76
NFI1	YOR156C	HIF1	Q12373	385 aa		4.06	□□□□□ -1.76
NFI1	YOR156C	STE7	P06784	515 aa		4.05	□□□□□ -1.76
NFI1	YOR156C	UNG1	P12887	359 aa		4.05	□□□□□ -1.76
NFI1	YOR156C	ALD5	P40047	520 aa	Known RBP	4.05	□□□□□ -1.76
NFI1	YOR156C	YNL320W	P42840	284 aa		4.05	□□□□□ -1.76
NFI1	YOR156C	YGL039W	P53183	348 aa	Known RBP	4.05	□□□□□ -1.76
NFI1	YOR156C	YGR168C	P53293	376 aa		4.05	□□□□□ -1.76
NFI1	YOR156C	ERV25	P54837	211 aa	Known RBP	4.05	□□□□□ -1.76
NFI1	YOR156C	ENT5	Q03769	411 aa	Known RBP	4.05	□□□□□ -1.76
NFI1	YOR156C	YLR177W	Q06251	628 aa		4.05	□□□□□ -1.76
NFI1	YOR156C	CMK2	P22517	447 aa		4.04	□□□□□ -1.76
NFI1	YOR156C	MRPL40	P36534	297 aa		4.04	□□□□□ -1.76
NFI1	YOR156C	UTP25	P40498	721 aa	Known RBP	4.04	□□□□□ -1.76
NFI1	YOR156C	GAS2	Q06135	555 aa		4.04	□□□□□ -1.76
NFI1	YOR156C	SDS24	P38314	527 aa		4.04	□□□□□ -1.76
NFI1	YOR156C	SMF2	P38778	549 aa		4.04	□□□□□ -1.76
NFI1	YOR156C	GPI8	P49018	411 aa		4.04	□□□□□ -1.76
NFI1	YOR156C	SCS7	Q03529	384 aa		4.04	□□□□□ -1.76
NFI1	YOR156C	VAC14	Q06708	880 aa		4.04	□□□□□ -1.76
NFI1	YOR156C	TAF10	Q12030	206 aa		4.04	□□□□□ -1.76
NFI1	YOR156C	YKL162C	P36052	402 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	INA22	P40576	216 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	YFL040W	P43562	540 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	CDH1	P53197	566 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	DDC1	Q08949	612 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	MOB2	P43563	287 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	YJR054W	P47114	497 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	SHE10	P53075	577 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	ARP5	P53946	755 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	SLT2	Q00772	484 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	APC2	Q12440	853 aa		4.03	□□□□□ -1.76
NFI1	YOR156C	COX4	P04037	155 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	PCL1	P24867	279 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	ACB1	P31787	87 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	FET3	P38993	636 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	IGD1	P43598	195 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	VHT1	P53241	593 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	ECM18	Q04623	453 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	DAL80	P26343	269 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	YGR015C	P53208	328 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	VOA1	P53262	265 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	HAL1	Q01766	294 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	RRG8	Q06109	277 aa		4.02	□□□□□ -1.77
NFI1	YOR156C	DCP1	Q12517	231 aa	Predicted RBP	4.02	□□□□□ -1.77
NFI1	YOR156C	REP1	P03871	373 aa		4.01	□□□□□ -1.77
NFI1	YOR156C	SOL2	P37262	315 aa		4.01	□□□□□ -1.77
NFI1	YOR156C	SHE1	P38200	338 aa		4.01	□□□□□ -1.77
NFI1	YOR156C	RBK1	P25332	333 aa		4	□□□□□ -1.77
NFI1	YOR156C	COS9	P36034	407 aa		4	□□□□□ -1.77
NFI1	YOR156C	MKC7	P53379	596 aa		4	□□□□□ -1.77
NFI1	YOR156C	CAR2	P07991	424 aa	Known RBP	4	□□□□□ -1.77
NFI1	YOR156C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4	□□□□□ -1.77	not detected
NFI1	YOR156C	IES6	P32617	166 aa		4	□□□□□ -1.77
NFI1	YOR156C	DTR1	P38125	572 aa		4	□□□□□ -1.77
NFI1	YOR156C	WSC4	P38739	605 aa		4	□□□□□ -1.77
NFI1	YOR156C	BIO3	P50277	480 aa		4	□□□□□ -1.77
NFI1	YOR156C	PNC1	P53184	216 aa	Known RBP	4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms