RNA–Protein interactions for RNA: YNR028W

CPR8, Transcript of Peptidyl-prolyl cis-trans isomerase (cyclophilin), yeastyeast

Gene CPR8, Length 927 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CPR8YNR028W POM152P39685 1337 aa3.35□□□□□ -1.87
CPR8YNR028W RNR2P09938 399 aaKnown RBP3.34□□□□□ -1.87
CPR8YNR028W YEF1P32622 495 aa3.34□□□□□ -1.87
CPR8YNR028W MRP21P38175 177 aa3.34□□□□□ -1.87
CPR8YNR028W TAE1P38340 232 aa3.34□□□□□ -1.87
CPR8YNR028W GPI16P38875 610 aa3.34□□□□□ -1.87
CPR8YNR028W OXA1P39952 402 aa3.34□□□□□ -1.87
CPR8YNR028W YER085CP40058 173 aa3.34□□□□□ -1.87
CPR8YNR028W SCC4P40090 624 aa3.34□□□□□ -1.87
CPR8YNR028W EGT2P42835 1041 aa3.34□□□□□ -1.87
CPR8YNR028W LOH1P47055 219 aa3.34□□□□□ -1.87
CPR8YNR028W EFM3P47163 339 aa3.34□□□□□ -1.87
CPR8YNR028W BNS1P50084 137 aa3.34□□□□□ -1.87
CPR8YNR028W CRH1P53301 507 aa3.34□□□□□ -1.87
CPR8YNR028W MNT4P53745 580 aa3.34□□□□□ -1.87
CPR8YNR028W COS1P53822 381 aa3.34□□□□□ -1.87
CPR8YNR028W SPR6Q01684 191 aa3.34□□□□□ -1.87
CPR8YNR028W SPO19Q03029 223 aa3.34□□□□□ -1.87
CPR8YNR028W APC4Q04601 652 aa3.34□□□□□ -1.87
CPR8YNR028W ERV41Q04651 352 aa3.34□□□□□ -1.87
CPR8YNR028W YPR078CQ06813 372 aa3.34□□□□□ -1.87
CPR8YNR028W UGA1P17649 471 aa3.33□□□□□ -1.88
CPR8YNR028W DAP2P18962 818 aa3.33□□□□□ -1.88
CPR8YNR028W ACP1P32463 125 aa3.33□□□□□ -1.88
CPR8YNR028W YKL071WP36086 256 aa3.33□□□□□ -1.88
CPR8YNR028W MAL32P38158 584 aa3.33□□□□□ -1.88
CPR8YNR028W KAP104P38217 918 aaKnown RBP3.33□□□□□ -1.88
CPR8YNR028W POP7P38291 140 aa3.33□□□□□ -1.88
CPR8YNR028W YMR262WP38430 313 aa3.33□□□□□ -1.88
CPR8YNR028W END3P39013 349 aa3.33□□□□□ -1.88
CPR8YNR028W OTU1P43558 301 aa3.33□□□□□ -1.88
CPR8YNR028W MND1P53102 219 aa3.33□□□□□ -1.88
CPR8YNR028W YGR117CP53270 476 aa3.33□□□□□ -1.88
CPR8YNR028W MAL12P53341 584 aa3.33□□□□□ -1.88
CPR8YNR028W URC2Q04411 772 aa3.33□□□□□ -1.88
CPR8YNR028W PRM6Q04705 352 aa3.33□□□□□ -1.88
CPR8YNR028W YMR226CQ05016 267 aaKnown RBP3.33□□□□□ -1.88
CPR8YNR028W NSE1Q07913 336 aa3.33□□□□□ -1.88
CPR8YNR028W GET4Q12125 312 aa3.33□□□□□ -1.88
CPR8YNR028W SEY1Q99287 776 aa3.33□□□□□ -1.88
CPR8YNR028W VPS63O13549 108 aa3.32□□□□□ -1.88
CPR8YNR028W NRP1P32770 719 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
CPR8YNR028W SKT5P34226 696 aa3.32□□□□□ -1.88
CPR8YNR028W YKL070WP36087 169 aa3.32□□□□□ -1.88
CPR8YNR028W EGD2P38879 174 aaKnown RBP3.32□□□□□ -1.88
CPR8YNR028W BAT1P38891 393 aaKnown RBP3.32□□□□□ -1.88
CPR8YNR028W RCY1P39531 840 aa3.32□□□□□ -1.88
CPR8YNR028W SHQ1P40486 507 aaPredicted RBP3.32□□□□□ -1.88
CPR8YNR028W ATG18P43601 500 aa3.32□□□□□ -1.88
CPR8YNR028W ROG1P53118 685 aa3.32□□□□□ -1.88
CPR8YNR028W LSG1P53145 640 aaKnown RBP3.32□□□□□ -1.88
CPR8YNR028W LIF1P53150 421 aa3.32□□□□□ -1.88
CPR8YNR028W CLD1P53264 445 aa3.32□□□□□ -1.88
CPR8YNR028W RTC4P53850 401 aa3.32□□□□□ -1.88
CPR8YNR028W YDR541CQ03049 344 aa3.32□□□□□ -1.88
CPR8YNR028W YET2Q04210 160 aa3.32□□□□□ -1.88
CPR8YNR028W YCR024C-BQ3E7Z8 88 aa3.32□□□□□ -1.88
CPR8YNR028W SSC1P0CS90 654 aaKnown RBP3.31□□□□□ -1.88
CPR8YNR028W YPK2P18961 677 aa3.31□□□□□ -1.88
CPR8YNR028W SLM5P25345 492 aaKnown RBP3.31□□□□□ -1.88
CPR8YNR028W ICL1P28240 557 aaPredicted RBP3.31□□□□□ -1.88
CPR8YNR028W ZIP1P31111 875 aa3.31□□□□□ -1.88
CPR8YNR028W QDR3P38227 689 aa3.31□□□□□ -1.88
CPR8YNR028W YHR182WP38870 785 aa3.31□□□□□ -1.88
CPR8YNR028W PTI1P39927 425 aaPredicted RBP3.31□□□□□ -1.88
CPR8YNR028W ATM1P40416 690 aa3.31□□□□□ -1.88
CPR8YNR028W STE24P47154 453 aa3.31□□□□□ -1.88
CPR8YNR028W MPS2P53159 387 aa3.31□□□□□ -1.88
CPR8YNR028W PNC1P53184 216 aaKnown RBP3.31□□□□□ -1.88
CPR8YNR028W MRPL50P53724 139 aa3.31□□□□□ -1.88
CPR8YNR028W ABZ2Q03266 374 aa3.31□□□□□ -1.88
CPR8YNR028W RRG8Q06109 277 aa3.31□□□□□ -1.88
CPR8YNR028W CUR1Q06469 252 aa3.31□□□□□ -1.88
CPR8YNR028W BRX1Q08235 291 aaKnown RBP3.31□□□□□ -1.88
CPR8YNR028W VIK1Q12045 647 aa3.31□□□□□ -1.88
CPR8YNR028W BTS1Q12051 335 aa3.31□□□□□ -1.88
CPR8YNR028W YOL107WQ12239 342 aa3.31□□□□□ -1.88
CPR8YNR028W RNH203Q12338 110 aa3.31□□□□□ -1.88
CPR8YNR028W DCP1Q12517 231 aaPredicted RBP3.31□□□□□ -1.88
CPR8YNR028W HTZ1Q12692 134 aaKnown RBP3.31□□□□□ -1.88
CPR8YNR028W NAG1Q8TGN9 163 aa3.31□□□□□ -1.88
CPR8YNR028W PAB1P04147 577 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88 RIP-Chip
CPR8YNR028W OPI3P05375 206 aa3.3□□□□□ -1.88
CPR8YNR028W DPB2P24482 689 aaPredicted RBP3.3□□□□□ -1.88
CPR8YNR028W DEP1P31385 405 aa3.3□□□□□ -1.88
CPR8YNR028W IES6P32617 166 aa3.3□□□□□ -1.88
CPR8YNR028W RAD5P32849 1169 aaPredicted RBP3.3□□□□□ -1.88
CPR8YNR028W SKG6P32900 734 aaPredicted RBP3.3□□□□□ -1.88
CPR8YNR028W GDH2P33327 1092 aaKnown RBP3.3□□□□□ -1.88
CPR8YNR028W PTK1P36002 662 aaPredicted RBP3.3□□□□□ -1.88
CPR8YNR028W ANR2P36090 516 aaPredicted RBP3.3□□□□□ -1.88
CPR8YNR028W PFF1P38244 976 aa3.3□□□□□ -1.88
CPR8YNR028W MLH1P38920 769 aa3.3□□□□□ -1.88
CPR8YNR028W YNL208WP40159 199 aaKnown RBP3.3□□□□□ -1.88
CPR8YNR028W BNA6P43619 295 aa3.3□□□□□ -1.88
CPR8YNR028W GLG2P47011 380 aa3.3□□□□□ -1.88
CPR8YNR028W ASN2P49090 572 aaKnown RBP3.3□□□□□ -1.88
CPR8YNR028W SSU72P53538 206 aaPredicted RBP3.3□□□□□ -1.88
CPR8YNR028W YNL260CP53846 198 aa3.3□□□□□ -1.88
CPR8YNR028W GIM5Q04493 163 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms