RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W FAA1P30624 700 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W ARO7P32178 256 aa5.45□□□□□ -1.54
ATG4YNL223W DCG1P32460 244 aa5.45□□□□□ -1.54
ATG4YNL223W MCM7P38132 845 aa5.45□□□□□ -1.54
ATG4YNL223W PCL6P40038 420 aa5.45□□□□□ -1.54
ATG4YNL223W BUR6P40096 142 aa5.45□□□□□ -1.54
ATG4YNL223W YTA6P40328 754 aa5.45□□□□□ -1.54
ATG4YNL223W YGL235WP53071 178 aa5.45□□□□□ -1.54
ATG4YNL223W VPS73P53142 486 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W SCW11P53189 542 aa5.45□□□□□ -1.54
ATG4YNL223W GRX3Q03835 250 aa5.45□□□□□ -1.54
ATG4YNL223W MGR3Q04472 501 aa5.45□□□□□ -1.54
ATG4YNL223W YPQ2Q06328 317 aa5.45□□□□□ -1.54
ATG4YNL223W NBA1Q08229 501 aaKnown RBP5.45□□□□□ -1.54
ATG4YNL223W GUP2Q08929 609 aa5.45□□□□□ -1.54
ATG4YNL223W PSF1Q12488 208 aa5.45□□□□□ -1.54
ATG4YNL223W YDL007C-AQ2V2Q0 85 aa5.45□□□□□ -1.54
ATG4YNL223W POL2P21951 2222 aaKnown RBP5.44□□□□□ -1.54
ATG4YNL223W RPL24BP24000 155 aaKnown RBP5.44□□□□□ -1.54
ATG4YNL223W GIT1P25346 518 aa5.44□□□□□ -1.54
ATG4YNL223W SUR1P33300 382 aa5.44□□□□□ -1.54
ATG4YNL223W EXO84P38261 753 aa5.44□□□□□ -1.54
ATG4YNL223W RPS20P38701 121 aaKnown RBP5.44□□□□□ -1.54
ATG4YNL223W YHR035WP38769 630 aa5.44□□□□□ -1.54
ATG4YNL223W RRP4P38792 359 aaKnown RBP5.44□□□□□ -1.54
ATG4YNL223W CHL4P38907 458 aa5.44□□□□□ -1.54
ATG4YNL223W VPS52P39904 641 aa5.44□□□□□ -1.54
ATG4YNL223W RPA14P50106 137 aa5.44□□□□□ -1.54
ATG4YNL223W SPT20P50875 604 aa5.44□□□□□ -1.54
ATG4YNL223W YGL101WP53144 215 aa5.44□□□□□ -1.54
ATG4YNL223W YGR067CP53243 804 aa5.44□□□□□ -1.54
ATG4YNL223W MPA43P53583 542 aaPredicted RBP5.44□□□□□ -1.54
ATG4YNL223W NCE101Q02820 53 aa5.44□□□□□ -1.54
ATG4YNL223W YMR210WQ03649 449 aa5.44□□□□□ -1.54
ATG4YNL223W YPS7Q06325 596 aa5.44□□□□□ -1.54
ATG4YNL223W SYO1Q07395 620 aa5.44□□□□□ -1.54
ATG4YNL223W SOG2Q08817 791 aa5.44□□□□□ -1.54
ATG4YNL223W NPC2Q12408 173 aa5.44□□□□□ -1.54
ATG4YNL223W DFG16Q99234 619 aa5.44□□□□□ -1.54
ATG4YNL223W CYR1P08678 2026 aaKnown RBP5.43□□□□□ -1.54
ATG4YNL223W RPN13O13563 156 aa5.43□□□□□ -1.54
ATG4YNL223W CAN1P04817 590 aa5.43□□□□□ -1.54
ATG4YNL223W YSF3P0C074 85 aaPredicted RBP5.43□□□□□ -1.54
ATG4YNL223W ERD2P18414 219 aa5.43□□□□□ -1.54
ATG4YNL223W MKK2P32491 506 aa5.43□□□□□ -1.54
ATG4YNL223W NPL6P32832 435 aa5.43□□□□□ -1.54
ATG4YNL223W YPT7P32939 208 aa5.43□□□□□ -1.54
ATG4YNL223W GPX2P38143 162 aa5.43□□□□□ -1.54
ATG4YNL223W IFA38P38286 347 aa5.43□□□□□ -1.54
ATG4YNL223W NVJ1P38881 321 aa5.43□□□□□ -1.54
ATG4YNL223W YHR210CP38893 341 aa5.43□□□□□ -1.54
ATG4YNL223W YIL166CP40445 542 aa5.43□□□□□ -1.54
ATG4YNL223W AIR1P40507 360 aaKnown RBP5.43□□□□□ -1.54
ATG4YNL223W LEM3P42838 414 aa5.43□□□□□ -1.54
ATG4YNL223W STB1P42845 420 aa5.43□□□□□ -1.54
ATG4YNL223W YJR141WP47172 347 aaPredicted RBP5.43□□□□□ -1.54
ATG4YNL223W LSG1P53145 640 aaKnown RBP5.43□□□□□ -1.54
ATG4YNL223W PGA1P53896 198 aa5.43□□□□□ -1.54
ATG4YNL223W TPP1Q03796 238 aa5.43□□□□□ -1.54
ATG4YNL223W HED1Q03937 162 aa5.43□□□□□ -1.54
ATG4YNL223W SNT309Q06091 175 aaPredicted RBP5.43□□□□□ -1.54
ATG4YNL223W YLR173WQ06247 608 aa5.43□□□□□ -1.54
ATG4YNL223W NOP12Q08208 459 aaKnown RBP5.43□□□□□ -1.54
ATG4YNL223W FMP40Q08968 688 aaPredicted RBP5.43□□□□□ -1.54
ATG4YNL223W YOR289WQ12012 251 aaPredicted RBP5.43□□□□□ -1.54
ATG4YNL223W MED2Q12124 431 aa5.43□□□□□ -1.54
ATG4YNL223W ACF2Q12168 779 aa5.43□□□□□ -1.54
ATG4YNL223W PCL9Q12477 304 aa5.43□□□□□ -1.54
ATG4YNL223W DCP1Q12517 231 aaPredicted RBP5.43□□□□□ -1.54
ATG4YNL223W YGR161W-CQ3E744 92 aa5.43□□□□□ -1.54
ATG4YNL223W FMP27Q06179 2628 aa5.42□□□□□ -1.54
ATG4YNL223W GLK1P17709 500 aaKnown RBP5.42□□□□□ -1.54
ATG4YNL223W PHO80P20052 293 aa5.42□□□□□ -1.54
ATG4YNL223W SNC1P31109 117 aa5.42□□□□□ -1.54
ATG4YNL223W TIM12P32830 109 aa5.42□□□□□ -1.54
ATG4YNL223W MDL1P33310 695 aa5.42□□□□□ -1.54
ATG4YNL223W SHE1P38200 338 aa5.42□□□□□ -1.54
ATG4YNL223W HRB1P38922 454 aaKnown RBP RIP-Chip data5.42□□□□□ -1.54not detected
ATG4YNL223W DUG1P43616 481 aaKnown RBP5.42□□□□□ -1.54
ATG4YNL223W IDS2P46958 469 aa5.42□□□□□ -1.54
ATG4YNL223W COS10P52924 374 aa5.42□□□□□ -1.54
ATG4YNL223W SEH1P53011 349 aaKnown RBP5.42□□□□□ -1.54
ATG4YNL223W CPR8P53728 308 aa5.42□□□□□ -1.54
ATG4YNL223W MNT4P53745 580 aa5.42□□□□□ -1.54
ATG4YNL223W NAM8Q00539 523 aaKnown RBP5.42□□□□□ -1.54
ATG4YNL223W DML1Q03652 475 aa5.42□□□□□ -1.54
ATG4YNL223W RCF1Q03713 159 aa5.42□□□□□ -1.54
ATG4YNL223W YLR346CQ06139 101 aa5.42□□□□□ -1.54
ATG4YNL223W YPR127WQ06494 345 aa5.42□□□□□ -1.54
ATG4YNL223W MLC2Q06580 163 aa5.42□□□□□ -1.54
ATG4YNL223W NGL1Q08213 363 aaKnown RBP5.42□□□□□ -1.54
ATG4YNL223W THP3Q12049 470 aaKnown RBP5.42□□□□□ -1.54
ATG4YNL223W YDL177CQ12257 170 aa5.42□□□□□ -1.54
ATG4YNL223W NFT1P0CE68 1218 aa5.41□□□□□ -1.54
ATG4YNL223W DAT1P13483 248 aaKnown RBP5.41□□□□□ -1.54
ATG4YNL223W YPK2P18961 677 aa5.41□□□□□ -1.54
ATG4YNL223W PRP28P23394 588 aa5.41□□□□□ -1.54
ATG4YNL223W PMT2P31382 759 aa5.41□□□□□ -1.54
ATG4YNL223W YEF1P32622 495 aa5.41□□□□□ -1.54
ATG4YNL223W RPP1P38786 293 aa5.41□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms