RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	YDL129W	Q07555	291 aa		4.37	□□□□□ -1.71
SSB2	YNL209W	GUP2	Q08929	609 aa		4.37	□□□□□ -1.71
SSB2	YNL209W	SAM4	Q08985	325 aa	Known RBP	4.37	□□□□□ -1.71
SSB2	YNL209W	YTM1	Q12024	460 aa	Predicted RBP	4.37	□□□□□ -1.71
SSB2	YNL209W	PUS9	Q12069	462 aa		4.37	□□□□□ -1.71
SSB2	YNL209W	DIN7	Q12086	430 aa		4.37	□□□□□ -1.71
SSB2	YNL209W	RBD2	Q12270	262 aa		4.37	□□□□□ -1.71
SSB2	YNL209W	TRM10	Q12400	293 aa		4.37	□□□□□ -1.71
SSB2	YNL209W	TMA7	Q3E764	64 aa	Known RBP	4.37	□□□□□ -1.71
SSB2	YNL209W	RPL25	P04456	142 aa	Known RBP	4.36	□□□□□ -1.71
SSB2	YNL209W	MET2	P08465	486 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	ZWF1	P11412	505 aa	Known RBP	4.36	□□□□□ -1.71
SSB2	YNL209W	IMG2	P25642	146 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB2	YNL209W	MCM10	P32354	571 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	CDC13	P32797	924 aa	Known RBP	4.36	□□□□□ -1.71
SSB2	YNL209W	DHR2	P36009	735 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB2	YNL209W	YHR112C	P38716	378 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	GDI1	P39958	451 aa	Known RBP	4.36	□□□□□ -1.71
SSB2	YNL209W	MAD2	P40958	196 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	HXT14	P42833	540 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	MRPS18	P42847	217 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	YGR201C	P42936	225 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	IRC6	P43615	237 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	ROG1	P53118	685 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	ART5	P53244	586 aa	Known RBP	4.36	□□□□□ -1.71
SSB2	YNL209W	SLX9	P53251	210 aa	Predicted RBP	4.36	□□□□□ -1.71
SSB2	YNL209W	DBP6	P53734	629 aa	Known RBP	4.36	□□□□□ -1.71
SSB2	YNL209W	CAF40	P53829	373 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	YMR279C	Q03263	540 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	TRM82	Q03774	444 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	SNX41	Q04053	625 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	URC2	Q04411	772 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	YLR173W	Q06247	608 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	MRX4	Q12467	430 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	SKS1	Q12505	502 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	YBR298C-A	Q8TGK4	73 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	STT4	P37297	1900 aa		4.36	□□□□□ -1.71
SSB2	YNL209W	DBP2	P24783	546 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	CNB1	P25296	175 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	ADE1	P27616	306 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	PMT2	P31382	759 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	NTH1	P32356	751 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	BIG1	P38813	335 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	CTF8	P38877	133 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	AXL2	P38928	823 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	TPA1	P40032	644 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	RRG9	P40156	214 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	MTQ1	P53944	314 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	YDR249C	Q03787	373 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	RIM13	Q03792	727 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	YML096W	Q04489	525 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	DFG5	Q05031	458 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	PAL1	Q05518	499 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	RRP12	Q12754	1228 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	PNO1	Q99216	274 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	URA3	P03962	267 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	CDC36	P06100	191 aa	Predicted RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	BUD5	P25300	642 aa	Predicted RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	CTS1	P29029	562 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	ERG1	P32476	496 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	VAM7	P32912	316 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	SFC1	P33303	322 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	MCM7	P38132	845 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	VMA7	P39111	118 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	YCK3	P39962	524 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	PSA1	P41940	361 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	QRI7	P43122	407 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	YJL016W	P47072	561 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	STE24	P47154	453 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	JHD2	P47156	728 aa	Predicted RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	MSE1	P48525	536 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	COQ5	P49017	307 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	LCL3	P53153	274 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	FHN1	P53279	174 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	PBP1	P53297	722 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	BIO5	P53744	561 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	RHO4	Q00246	291 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	YPL113C	Q02961	396 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	HED1	Q03937	162 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	BOP2	Q06150	570 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	YPR147C	Q06522	304 aa	Known RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	LUC7	Q07508	261 aa	Predicted RBP	4.35	□□□□□ -1.71
SSB2	YNL209W	FRE5	Q08908	694 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	DCN1	Q12395	269 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	TMA17	Q12513	150 aa		4.35	□□□□□ -1.71
SSB2	YNL209W	KIN28	P06242	306 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	STE7	P06784	515 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	NFT1	P0CE68	1218 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	MRP2	P10663	115 aa	Predicted RBP	4.34	□□□□□ -1.71
SSB2	YNL209W	STF2	P16965	84 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	VPS33	P20795	691 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	CMK1	P27466	446 aa	Known RBP	4.34	□□□□□ -1.71
SSB2	YNL209W	NDC1	P32500	655 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	LOT5	P34234	306 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	SPT23	P35210	1082 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	ASC1	P38011	319 aa	Known RBP	4.34	□□□□□ -1.71
SSB2	YNL209W	CDS1	P38221	457 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	NTC20	P38302	140 aa	Predicted RBP	4.34	□□□□□ -1.71
SSB2	YNL209W	SEN34	P39707	275 aa		4.34	□□□□□ -1.71
SSB2	YNL209W	TIF34	P40217	347 aa	Known RBP	4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms