RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A PAD1P33751 242 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
YSF3YNL138W-A SWH1P35845 1188 aa3.04□□□□□ -1.92
YSF3YNL138W-A FAA2P39518 744 aa3.04□□□□□ -1.92
YSF3YNL138W-A PHB2P50085 310 aa3.04□□□□□ -1.92
YSF3YNL138W-A YNR048WP53740 393 aa3.04□□□□□ -1.92
YSF3YNL138W-A KAP120Q02932 1032 aa3.04□□□□□ -1.92
YSF3YNL138W-A YET2Q04210 160 aa3.04□□□□□ -1.92
YSF3YNL138W-A RAX1Q08760 435 aa3.04□□□□□ -1.92
YSF3YNL138W-A RKM1Q08961 583 aaPredicted RBP3.04□□□□□ -1.92
YSF3YNL138W-A TEF1P02994 458 aaKnown RBP3.03□□□□□ -1.92
YSF3YNL138W-A MNE1P24720 663 aa3.03□□□□□ -1.92
YSF3YNL138W-A CTR86P25355 563 aa3.03□□□□□ -1.92
YSF3YNL138W-A SPS22P25380 463 aa3.03□□□□□ -1.92
YSF3YNL138W-A KAR9P32526 644 aa3.03□□□□□ -1.92
YSF3YNL138W-A SKN1P33336 771 aa3.03□□□□□ -1.92
YSF3YNL138W-A PEX5P35056 612 aa3.03□□□□□ -1.92
YSF3YNL138W-A BLI1P35727 113 aa3.03□□□□□ -1.92
YSF3YNL138W-A SOL2P37262 315 aa3.03□□□□□ -1.92
YSF3YNL138W-A PRM5P40476 318 aa3.03□□□□□ -1.92
YSF3YNL138W-A KTR6P54070 446 aa3.03□□□□□ -1.92
YSF3YNL138W-A SKO1Q02100 647 aa3.03□□□□□ -1.92
YSF3YNL138W-A YPR114WQ06107 315 aa3.03□□□□□ -1.92
YSF3YNL138W-A RLP24Q07915 199 aaKnown RBP3.03□□□□□ -1.92
YSF3YNL138W-A PLB3Q08108 686 aa3.03□□□□□ -1.92
YSF3YNL138W-A REX4Q08237 289 aa3.03□□□□□ -1.92
YSF3YNL138W-A SNX3Q08826 162 aaKnown RBP3.03□□□□□ -1.92
YSF3YNL138W-A ARG4P04076 463 aaPredicted RBP3.02□□□□□ -1.93
YSF3YNL138W-A PDX1P16451 410 aa3.02□□□□□ -1.93
YSF3YNL138W-A MET16P18408 261 aaPredicted RBP3.02□□□□□ -1.93
YSF3YNL138W-A LSB5P25369 354 aa3.02□□□□□ -1.93
YSF3YNL138W-A RDS1P25611 832 aa3.02□□□□□ -1.93
YSF3YNL138W-A URA7P28274 579 aaKnown RBP3.02□□□□□ -1.93
YSF3YNL138W-A SDH3P33421 198 aa3.02□□□□□ -1.93
YSF3YNL138W-A SWD3P38123 315 aa3.02□□□□□ -1.93
YSF3YNL138W-A KAP104P38217 918 aaKnown RBP3.02□□□□□ -1.93
YSF3YNL138W-A MTC6P38849 526 aa3.02□□□□□ -1.93
YSF3YNL138W-A PTH1P38876 190 aaKnown RBP3.02□□□□□ -1.93
YSF3YNL138W-A YEL075CP39972 122 aa3.02□□□□□ -1.93
YSF3YNL138W-A EDC3P39998 551 aaKnown RBP3.02□□□□□ -1.93
YSF3YNL138W-A RPC17P47076 161 aa3.02□□□□□ -1.93
YSF3YNL138W-A ASN2P49090 572 aaKnown RBP3.02□□□□□ -1.93
YSF3YNL138W-A TRM9P49957 279 aa3.02□□□□□ -1.93
YSF3YNL138W-A IGO1P53897 168 aa3.02□□□□□ -1.93
YSF3YNL138W-A YDR541CQ03049 344 aa3.02□□□□□ -1.93
YSF3YNL138W-A BET5Q03630 159 aa3.02□□□□□ -1.93
YSF3YNL138W-A YOR342CQ12182 319 aa3.02□□□□□ -1.93
YSF3YNL138W-A RMD5Q12508 421 aa3.02□□□□□ -1.93
YSF3YNL138W-A FAS1P07149 2051 aaKnown RBP3.02□□□□□ -1.93
YSF3YNL138W-A JIP3O13555 125 aa3.01□□□□□ -1.93
YSF3YNL138W-A MSP1P28737 362 aa3.01□□□□□ -1.93
YSF3YNL138W-A KRE6P32486 720 aa3.01□□□□□ -1.93
YSF3YNL138W-A SRP72P38688 640 aaKnown RBP3.01□□□□□ -1.93
YSF3YNL138W-A DED81P38707 554 aaKnown RBP3.01□□□□□ -1.93
YSF3YNL138W-A RRP4P38792 359 aaKnown RBP3.01□□□□□ -1.93
YSF3YNL138W-A YIL086CP40503 102 aa3.01□□□□□ -1.93
YSF3YNL138W-A YGR210CP42942 411 aa3.01□□□□□ -1.93
YSF3YNL138W-A PHO86P46956 311 aa3.01□□□□□ -1.93
YSF3YNL138W-A SWC4P53201 476 aa3.01□□□□□ -1.93
YSF3YNL138W-A GIP3Q03016 1276 aa3.01□□□□□ -1.93
YSF3YNL138W-A SMA2Q04658 369 aa3.01□□□□□ -1.93
YSF3YNL138W-A ERB1Q04660 807 aaKnown RBP3.01□□□□□ -1.93
YSF3YNL138W-A SKI7Q08491 747 aaPredicted RBP3.01□□□□□ -1.93
YSF3YNL138W-A SCEIP03882 235 aa3□□□□□ -1.93
YSF3YNL138W-A RPS8AP0CX39 200 aaKnown RBP3□□□□□ -1.93
YSF3YNL138W-A RPS8BP0CX40 200 aaKnown RBP3□□□□□ -1.93
YSF3YNL138W-A HOM3P10869 527 aa3□□□□□ -1.93
YSF3YNL138W-A SPO12P17123 173 aa3□□□□□ -1.93
YSF3YNL138W-A VMA8P32610 256 aaKnown RBP3□□□□□ -1.93
YSF3YNL138W-A KKQ8P36004 724 aa3□□□□□ -1.93
YSF3YNL138W-A LRP1P38801 184 aaKnown RBP3□□□□□ -1.93
YSF3YNL138W-A REE1P40893 198 aa3□□□□□ -1.93
YSF3YNL138W-A MTM1P53320 366 aa3□□□□□ -1.93
YSF3YNL138W-A OCA2P53949 197 aa3□□□□□ -1.93
YSF3YNL138W-A GPI15P53961 229 aa3□□□□□ -1.93
YSF3YNL138W-A RHO3Q00245 231 aaKnown RBP3□□□□□ -1.93
YSF3YNL138W-A YMR181CQ03231 154 aa3□□□□□ -1.93
YSF3YNL138W-A RSN1Q03516 953 aa3□□□□□ -1.93
YSF3YNL138W-A ACL4Q03771 387 aa3□□□□□ -1.93
YSF3YNL138W-A INP2Q03824 705 aa3□□□□□ -1.93
YSF3YNL138W-A YMR130WQ04223 302 aa3□□□□□ -1.93
YSF3YNL138W-A DCS1Q06151 350 aa3□□□□□ -1.93
YSF3YNL138W-A SGT1Q08446 395 aa3□□□□□ -1.93
YSF3YNL138W-A EMP46Q12396 444 aa3□□□□□ -1.93
YSF3YNL138W-A ISA2Q12425 185 aa3□□□□□ -1.93
YSF3YNL138W-A ADH2P00331 348 aaKnown RBP2.99□□□□□ -1.93
YSF3YNL138W-A HIS1P00498 297 aaKnown RBP2.99□□□□□ -1.93
YSF3YNL138W-A TRP1P00912 224 aa2.99□□□□□ -1.93
YSF3YNL138W-A SPO7P18410 259 aa2.99□□□□□ -1.93
YSF3YNL138W-A CLN1P20437 546 aa2.99□□□□□ -1.93
YSF3YNL138W-A CLB1P24868 471 aa2.99□□□□□ -1.93
YSF3YNL138W-A DAL2P25335 343 aa2.99□□□□□ -1.93
YSF3YNL138W-A YCR102CP25608 368 aa2.99□□□□□ -1.93
YSF3YNL138W-A ARO2P28777 376 aaKnown RBP2.99□□□□□ -1.93
YSF3YNL138W-A YEL045CP32616 141 aa2.99□□□□□ -1.93
YSF3YNL138W-A MRPL15P36523 253 aa2.99□□□□□ -1.93
YSF3YNL138W-A MRPL37P36532 105 aa2.99□□□□□ -1.93
YSF3YNL138W-A RRN10P38204 145 aa2.99□□□□□ -1.93
YSF3YNL138W-A IML3P38265 245 aa2.99□□□□□ -1.93
YSF3YNL138W-A RRT2P38332 387 aa2.99□□□□□ -1.93
YSF3YNL138W-A MSG5P38590 489 aa2.99□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms